RNA–Protein interactions for RNA: ENST00000320755.11

COL9A1-201, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL9A1, Length 3,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-201ENST00000320755 OPHN1O60890 802 aa17.87■□□□□ 0.45
COL9A1-201ENST00000320755 LUC7L3O95232 432 aaKnown RBP17.87■□□□□ 0.45
COL9A1-201ENST00000320755 BAG2O95816 211 aa17.87■□□□□ 0.45
COL9A1-201ENST00000320755 IL1BP01584 269 aa17.87■□□□□ 0.45
COL9A1-201ENST00000320755 AMHP03971 560 aa17.87■□□□□ 0.45
COL9A1-201ENST00000320755 TPH1P17752 444 aa17.87■□□□□ 0.45
COL9A1-201ENST00000320755 PGAM1P18669 254 aa17.87■□□□□ 0.45
COL9A1-201ENST00000320755 ATP6V1C1P21283 382 aa17.87■□□□□ 0.45
COL9A1-201ENST00000320755 PGGT1BP53609 377 aa17.87■□□□□ 0.45
COL9A1-201ENST00000320755 SNX17Q15036 470 aa17.87■□□□□ 0.45
COL9A1-201ENST00000320755 OTUD1Q5VV17 481 aaPredicted RBP17.87■□□□□ 0.45
COL9A1-201ENST00000320755 CAPRIN2Q6IMN6 1127 aaKnown RBP17.87■□□□□ 0.45
COL9A1-201ENST00000320755 SCUBE1Q8IWY4 988 aa17.87■□□□□ 0.45
COL9A1-201ENST00000320755 ARHGAP24Q8N264 748 aa17.87■□□□□ 0.45
COL9A1-201ENST00000320755 FCRL3Q96P31 734 aaPredicted RBP17.87■□□□□ 0.45
COL9A1-201ENST00000320755 AGAP2Q99490 1192 aa17.87■□□□□ 0.45
COL9A1-201ENST00000320755 TTC1Q99614 292 aa17.87■□□□□ 0.45
COL9A1-201ENST00000320755 DUSP16Q9BY84 665 aa17.87■□□□□ 0.45
COL9A1-201ENST00000320755 ABHD16BQ9H3Z7 469 aa17.87■□□□□ 0.45
COL9A1-201ENST00000320755 MEIS3P2A8K0S8 358 aa17.87■□□□□ 0.45
COL9A1-201ENST00000320755 XPO1O14980 1071 aaKnown RBP17.87■□□□□ 0.45
COL9A1-201ENST00000320755 BIRC5O15392 142 aa17.87■□□□□ 0.45
COL9A1-201ENST00000320755 PTPN1P18031 435 aaKnown RBP17.87■□□□□ 0.45
COL9A1-201ENST00000320755 VHLP40337 213 aa17.87■□□□□ 0.45
COL9A1-201ENST00000320755 SLC25A3Q00325 362 aa17.87■□□□□ 0.45
COL9A1-201ENST00000320755 ITGA9Q13797 1035 aa17.87■□□□□ 0.45
COL9A1-201ENST00000320755 BLMHQ13867 455 aa17.87■□□□□ 0.45
COL9A1-201ENST00000320755 TEDDM1Q5T9Z0 273 aa17.87■□□□□ 0.45
COL9A1-201ENST00000320755 MBLAC2Q68D91 279 aa17.87■□□□□ 0.45
COL9A1-201ENST00000320755 KYAT3Q6YP21 454 aaKnown RBP17.87■□□□□ 0.45
COL9A1-201ENST00000320755 ATG14Q6ZNE5 492 aa17.87■□□□□ 0.45
COL9A1-201ENST00000320755 PIWIL2Q8TC59 973 aaKnown RBP17.87■□□□□ 0.45
COL9A1-201ENST00000320755 MOCOSQ96EN8 888 aa17.87■□□□□ 0.45
COL9A1-201ENST00000320755 CAB39LQ9H9S4 337 aa17.87■□□□□ 0.45
COL9A1-201ENST00000320755 LOC100653049A0A140TA62 436 aa17.87■□□□□ 0.45
COL9A1-201ENST00000320755 ZNF487B1APH4 448 aa17.87■□□□□ 0.45
COL9A1-201ENST00000320755 STRNO43815 780 aa17.87■□□□□ 0.45
COL9A1-201ENST00000320755 KRT34O76011 436 aa17.87■□□□□ 0.45
COL9A1-201ENST00000320755 POLBP06746 335 aa17.87■□□□□ 0.45
COL9A1-201ENST00000320755 FGF3P11487 239 aaPredicted RBP17.87■□□□□ 0.45
COL9A1-201ENST00000320755 NPR3P17342 541 aa17.87■□□□□ 0.45
COL9A1-201ENST00000320755 NCF2P19878 526 aaPredicted RBP17.87■□□□□ 0.45
COL9A1-201ENST00000320755 SLC34A1Q06495 639 aa17.87■□□□□ 0.45
COL9A1-201ENST00000320755 NIPAL4Q0D2K0 466 aa17.87■□□□□ 0.45
COL9A1-201ENST00000320755 DLG2Q15700 870 aa17.87■□□□□ 0.45
COL9A1-201ENST00000320755 MARK2Q7KZI7 788 aaKnown RBP17.87■□□□□ 0.45
COL9A1-201ENST00000320755 LMNTD2Q8IXW0 634 aa17.87■□□□□ 0.45
COL9A1-201ENST00000320755 EDEM1Q92611 657 aa17.87■□□□□ 0.45
COL9A1-201ENST00000320755 ULBP1Q9BZM6 244 aa17.87■□□□□ 0.45
COL9A1-201ENST00000320755 ANLNQ9NQW6 1124 aa17.87■□□□□ 0.45
COL9A1-201ENST00000320755 KRT82Q9NSB4 513 aa17.87■□□□□ 0.45
COL9A1-201ENST00000320755 HACD1B0YJ81 288 aa17.86■□□□□ 0.45
COL9A1-201ENST00000320755 ERCC2P18074 760 aa17.86■□□□□ 0.45
COL9A1-201ENST00000320755 NOS2P35228 1153 aa17.86■□□□□ 0.45
COL9A1-201ENST00000320755 BEX3Q00994 111 aa17.86■□□□□ 0.45
COL9A1-201ENST00000320755 C1orf146Q5VVC0 180 aa17.86■□□□□ 0.45
COL9A1-201ENST00000320755 LRRC74BQ6ZQY2 392 aa17.86■□□□□ 0.45
COL9A1-201ENST00000320755 APBB2Q92870 758 aa17.86■□□□□ 0.45
COL9A1-201ENST00000320755 STAP1Q9ULZ2 295 aa17.86■□□□□ 0.45
COL9A1-201ENST00000320755 RPL26L1Q9UNX3 145 aaKnown RBP17.86■□□□□ 0.45
COL9A1-201ENST00000320755 APOBEC2Q9Y235 224 aaKnown RBP17.86■□□□□ 0.45
COL9A1-201ENST00000320755 IPPQ9Y573 584 aa17.86■□□□□ 0.45
COL9A1-201ENST00000320755 TRIP12Q14669 1992 aaPredicted RBP17.86■□□□□ 0.45
COL9A1-201ENST00000320755 YJEFN3A6XGL0 299 aa17.86■□□□□ 0.45
COL9A1-201ENST00000320755 GLRA3O75311 464 aa17.86■□□□□ 0.45
COL9A1-201ENST00000320755 ALDH1A2O94788 518 aa17.86■□□□□ 0.45
COL9A1-201ENST00000320755 NCAM1P13591 858 aa17.86■□□□□ 0.45
COL9A1-201ENST00000320755 PEX6Q13608 980 aa17.86■□□□□ 0.45
COL9A1-201ENST00000320755 SV2CQ496J9 727 aa17.86■□□□□ 0.45
COL9A1-201ENST00000320755 HSP90AA5PQ58FG0 334 aa17.86■□□□□ 0.45
COL9A1-201ENST00000320755 RIPOR1Q6ZS17 1223 aa17.86■□□□□ 0.45
COL9A1-201ENST00000320755 PAQR9Q6ZVX9 377 aa17.86■□□□□ 0.45
COL9A1-201ENST00000320755 CCDC106Q9BWC9 280 aa17.86■□□□□ 0.45
COL9A1-201ENST00000320755 CYP4F11Q9HBI6 524 aa17.86■□□□□ 0.45
COL9A1-201ENST00000320755 SLC24A3Q9HC58 644 aa17.86■□□□□ 0.45
COL9A1-201ENST00000320755 MKS1Q9NXB0 559 aa17.86■□□□□ 0.45
COL9A1-201ENST00000320755 DONSONQ9NYP3 566 aa17.86■□□□□ 0.45
COL9A1-201ENST00000320755 PPP1R12AO14974 1030 aaPredicted RBP17.85■□□□□ 0.45
COL9A1-201ENST00000320755 CIB2O75838 187 aa17.85■□□□□ 0.45
COL9A1-201ENST00000320755 SMNDC1O75940 238 aaKnown RBP eCLIP17.85■□□□□ 0.45
COL9A1-201ENST00000320755 USP17L7P0C7H9 530 aa17.85■□□□□ 0.45
COL9A1-201ENST00000320755 PCLAFQ15004 111 aa17.85■□□□□ 0.45
COL9A1-201ENST00000320755 STEAP4Q687X5 459 aa17.85■□□□□ 0.45
COL9A1-201ENST00000320755 TIFABQ6ZNK6 161 aa17.85■□□□□ 0.45
COL9A1-201ENST00000320755 CLEC20AQ6ZU45 233 aa17.85■□□□□ 0.45
COL9A1-201ENST00000320755 STRA8Q7Z7C7 330 aa17.85■□□□□ 0.45
COL9A1-201ENST00000320755 ULK2Q8IYT8 1036 aa17.85■□□□□ 0.45
COL9A1-201ENST00000320755 PLD6Q8N2A8 252 aaKnown RBP17.85■□□□□ 0.45
COL9A1-201ENST00000320755 EFCAB3Q8N7B9 438 aa17.85■□□□□ 0.45
COL9A1-201ENST00000320755 PPP4R1Q8TF05 950 aa17.85■□□□□ 0.45
COL9A1-201ENST00000320755 UCMAQ8WVF2 138 aa17.85■□□□□ 0.45
COL9A1-201ENST00000320755 MFSD3Q96ES6 412 aa17.85■□□□□ 0.45
COL9A1-201ENST00000320755 CERS2Q96G23 380 aa17.85■□□□□ 0.45
COL9A1-201ENST00000320755 ZNF333Q96JL9 665 aa17.85■□□□□ 0.45
COL9A1-201ENST00000320755 PPP1R36Q96LQ0 422 aa17.85■□□□□ 0.45
COL9A1-201ENST00000320755 MAN1C1Q9NR34 630 aa17.85■□□□□ 0.45
COL9A1-201ENST00000320755 GDAP2Q9NXN4 497 aa17.85■□□□□ 0.45
COL9A1-201ENST00000320755 NRCAMQ92823 1304 aa17.85■□□□□ 0.45
COL9A1-201ENST00000320755 MLNP12872 115 aa17.85■□□□□ 0.45
COL9A1-201ENST00000320755 CNTFP26441 200 aa17.85■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms