RNA–Protein interactions for RNA: ENST00000318974.13

PTPN6-201, Transcript of protein tyrosine phosphatase, non-receptor type 6, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PTPN6, Length 2,245 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6-201ENST00000318974 MAGED2Q9UNF1 606 aaPredicted RBP13.04□□□□□ -0.32
PTPN6-201ENST00000318974 RWDD3Q9Y3V2 267 aa13.04□□□□□ -0.32
PTPN6-201ENST00000318974 YIPF1Q9Y548 306 aa13.04□□□□□ -0.32
PTPN6-201ENST00000318974 RASA4BC9J798 803 aa13.04□□□□□ -0.32
PTPN6-201ENST00000318974 APOL1O14791 398 aa13.04□□□□□ -0.32
PTPN6-201ENST00000318974 TEX28O15482 410 aa13.04□□□□□ -0.32
PTPN6-201ENST00000318974 RASA4O43374 803 aa13.04□□□□□ -0.32
PTPN6-201ENST00000318974 CXCL14O95715 111 aa13.04□□□□□ -0.32
PTPN6-201ENST00000318974 CSH1P0DML2 217 aa13.04□□□□□ -0.32
PTPN6-201ENST00000318974 CSH2P0DML3 217 aa13.04□□□□□ -0.32
PTPN6-201ENST00000318974 EIF4EBP2Q13542 120 aaPredicted RBP13.04□□□□□ -0.32
PTPN6-201ENST00000318974 TMC7Q7Z402 723 aa13.04□□□□□ -0.32
PTPN6-201ENST00000318974 ZBED8Q8IZ13 594 aa13.04□□□□□ -0.32
PTPN6-201ENST00000318974 PYROXD2Q8N2H3 581 aa13.04□□□□□ -0.32
PTPN6-201ENST00000318974 PCDH19Q8TAB3 1148 aa13.04□□□□□ -0.32
PTPN6-201ENST00000318974 MGARPQ8TDB4 240 aa13.04□□□□□ -0.32
PTPN6-201ENST00000318974 SGSM3Q96HU1 749 aa13.04□□□□□ -0.32
PTPN6-201ENST00000318974 SERPINB11Q96P15 392 aa13.04□□□□□ -0.32
PTPN6-201ENST00000318974 ELAC2Q9BQ52 826 aaKnown RBP13.04□□□□□ -0.32
PTPN6-201ENST00000318974 TKTL2Q9H0I9 626 aa13.04□□□□□ -0.32
PTPN6-201ENST00000318974 TMPRSS4Q9NRS4 437 aa13.04□□□□□ -0.32
PTPN6-201ENST00000318974 OLA1Q9NTK5 396 aaKnown RBP13.04□□□□□ -0.32
PTPN6-201ENST00000318974 SENP1Q9P0U3 644 aa13.04□□□□□ -0.32
PTPN6-201ENST00000318974 FETUBQ9UGM5 382 aa13.04□□□□□ -0.32
PTPN6-201ENST00000318974 SFMBT1Q9UHJ3 866 aa13.04□□□□□ -0.32
PTPN6-201ENST00000318974 LZTS1Q9Y250 596 aa13.04□□□□□ -0.32
PTPN6-201ENST00000318974 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.04□□□□□ -0.32
PTPN6-201ENST00000318974 LINC01553A4QN01 128 aa13.03□□□□□ -0.32
PTPN6-201ENST00000318974 H3BRJ5 948 aa13.03□□□□□ -0.32
PTPN6-201ENST00000318974 MCF2LO15068 1137 aa13.03□□□□□ -0.32
PTPN6-201ENST00000318974 SNX3O60493 162 aa13.03□□□□□ -0.32
PTPN6-201ENST00000318974 TGM2P21980 687 aa13.03□□□□□ -0.32
PTPN6-201ENST00000318974 STX2P32856 288 aa13.03□□□□□ -0.32
PTPN6-201ENST00000318974 SLC18A1P54219 525 aa13.03□□□□□ -0.32
PTPN6-201ENST00000318974 ARL4CP56559 192 aa13.03□□□□□ -0.32
PTPN6-201ENST00000318974 PDIA2Q13087 525 aaKnown RBP13.03□□□□□ -0.32
PTPN6-201ENST00000318974 MPP2Q14168 576 aa13.03□□□□□ -0.32
PTPN6-201ENST00000318974 TMED2Q15363 201 aa13.03□□□□□ -0.32
PTPN6-201ENST00000318974 BRMS1LQ5PSV4 323 aa13.03□□□□□ -0.32
PTPN6-201ENST00000318974 SLC9A4Q6AI14 798 aa13.03□□□□□ -0.32
PTPN6-201ENST00000318974 TRABD2AQ86V40 505 aa13.03□□□□□ -0.32
PTPN6-201ENST00000318974 PQLC3Q8N755 202 aa13.03□□□□□ -0.32
PTPN6-201ENST00000318974 ANKRD42Q8N9B4 389 aa13.03□□□□□ -0.32
PTPN6-201ENST00000318974 CSPG4P5Q96PW8 444 aa13.03□□□□□ -0.32
PTPN6-201ENST00000318974 UBE2OQ9C0C9 1292 aaKnown RBP13.03□□□□□ -0.32
PTPN6-201ENST00000318974 ANLNQ9NQW6 1124 aa13.03□□□□□ -0.32
PTPN6-201ENST00000318974 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.03□□□□□ -0.32
PTPN6-201ENST00000318974 SAE1Q9UBE0 346 aaPredicted RBP13.03□□□□□ -0.32
PTPN6-201ENST00000318974 SLC24A2Q9UI40 661 aa13.03□□□□□ -0.32
PTPN6-201ENST00000318974 NUDT5Q9UKK9 219 aa13.03□□□□□ -0.32
PTPN6-201ENST00000318974 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.03□□□□□ -0.32
PTPN6-201ENST00000318974 FAM47DPA6NHR8 397 aa13.03□□□□□ -0.32
PTPN6-201ENST00000318974 TCP11X1B4DZS4 312 aa13.03□□□□□ -0.32
PTPN6-201ENST00000318974 PRRG1O14668 218 aa13.03□□□□□ -0.32
PTPN6-201ENST00000318974 OAS1P00973 400 aaKnown RBP13.03□□□□□ -0.32
PTPN6-201ENST00000318974 CNPP09543 421 aaKnown RBP13.03□□□□□ -0.32
PTPN6-201ENST00000318974 ZDHHC11BP0C7U3 371 aa13.03□□□□□ -0.32
PTPN6-201ENST00000318974 ZFXP17010 805 aaPredicted RBP13.03□□□□□ -0.32
PTPN6-201ENST00000318974 GOT1P17174 413 aa13.03□□□□□ -0.32
PTPN6-201ENST00000318974 GCAP28676 217 aa13.03□□□□□ -0.32
PTPN6-201ENST00000318974 GDF10P55107 478 aa13.03□□□□□ -0.32
PTPN6-201ENST00000318974 FASTKD3Q14CZ7 662 aaKnown RBP13.03□□□□□ -0.32
PTPN6-201ENST00000318974 VEPH1Q14D04 833 aa13.03□□□□□ -0.32
PTPN6-201ENST00000318974 TCEAL8Q8IYN2 117 aa13.03□□□□□ -0.32
PTPN6-201ENST00000318974 NAT8LQ8N9F0 302 aa13.03□□□□□ -0.32
PTPN6-201ENST00000318974 PDZD8Q8NEN9 1154 aa13.03□□□□□ -0.32
PTPN6-201ENST00000318974 CPT1BQ92523 772 aa13.03□□□□□ -0.32
PTPN6-201ENST00000318974 ABHD8Q96I13 439 aa13.03□□□□□ -0.32
PTPN6-201ENST00000318974 MAGEB18Q96M61 343 aa13.03□□□□□ -0.32
PTPN6-201ENST00000318974 VPS37BQ9H9H4 285 aa13.03□□□□□ -0.32
PTPN6-201ENST00000318974 PRDM16Q9HAZ2 1276 aa13.03□□□□□ -0.32
PTPN6-201ENST00000318974 CREB3O43889 395 aa13.02□□□□□ -0.33
PTPN6-201ENST00000318974 GSTA1P08263 222 aa13.02□□□□□ -0.33
PTPN6-201ENST00000318974 STIP1P31948 543 aaKnown RBP13.02□□□□□ -0.33
PTPN6-201ENST00000318974 CCR1P32246 355 aa13.02□□□□□ -0.33
PTPN6-201ENST00000318974 PHBP35232 272 aa13.02□□□□□ -0.33
PTPN6-201ENST00000318974 SCTRP47872 440 aa13.02□□□□□ -0.33
PTPN6-201ENST00000318974 EIF3EP60228 445 aaKnown RBP13.02□□□□□ -0.33
PTPN6-201ENST00000318974 TAF12Q16514 161 aa13.02□□□□□ -0.33
PTPN6-201ENST00000318974 C9orf50Q5SZB4 431 aa13.02□□□□□ -0.33
PTPN6-201ENST00000318974 FBXW10Q5XX13 1052 aa13.02□□□□□ -0.33
PTPN6-201ENST00000318974 NUGGCQ68CJ6 796 aa13.02□□□□□ -0.33
PTPN6-201ENST00000318974 NPNTQ6UXI9 565 aa13.02□□□□□ -0.33
PTPN6-201ENST00000318974 PLD5Q8N7P1 536 aa13.02□□□□□ -0.33
PTPN6-201ENST00000318974 OVCA2Q8WZ82 227 aa13.02□□□□□ -0.33
PTPN6-201ENST00000318974 TCF25Q9BQ70 676 aa13.02□□□□□ -0.33
PTPN6-201ENST00000318974 PLCD4Q9BRC7 762 aa13.02□□□□□ -0.33
PTPN6-201ENST00000318974 ALG13Q9NP73 1137 aaKnown RBP13.02□□□□□ -0.33
PTPN6-201ENST00000318974 ARHGEF38Q9NXL2 777 aa13.02□□□□□ -0.33
PTPN6-201ENST00000318974 NR2E3Q9Y5X4 410 aa13.02□□□□□ -0.33
PTPN6-201ENST00000318974 KIAA1671Q9BY89 1806 aa13.02□□□□□ -0.33
PTPN6-201ENST00000318974 E7ESA3 106 aa13.01□□□□□ -0.33
PTPN6-201ENST00000318974 I6L893 689 aaPredicted RBP13.01□□□□□ -0.33
PTPN6-201ENST00000318974 EEF2KO00418 725 aaKnown RBP13.01□□□□□ -0.33
PTPN6-201ENST00000318974 PRPF4O43172 522 aaKnown RBP eCLIP13.01□□□□□ -0.33
PTPN6-201ENST00000318974 MSI1O43347 362 aaKnown RBP13.01□□□□□ -0.33
PTPN6-201ENST00000318974 RPL22P35268 128 aaKnown RBP13.01□□□□□ -0.33
PTPN6-201ENST00000318974 ZNF135P52742 658 aaPredicted RBP13.01□□□□□ -0.33
PTPN6-201ENST00000318974 IL9RQ01113 521 aa13.01□□□□□ -0.33
PTPN6-201ENST00000318974 TWF1Q12792 350 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms