RNA–Protein interactions for RNA: ENST00000309328.7

SSSCA1-201, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSSCA1, Length 698 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-201ENST00000309328 ZNF683Q8IZ20 524 aa18.46■□□□□ 0.55
SSSCA1-201ENST00000309328 TPCN2Q8NHX9 752 aa18.46■□□□□ 0.55
SSSCA1-201ENST00000309328 FIBINQ8TAL6 211 aa18.46■□□□□ 0.55
SSSCA1-201ENST00000309328 TTC8Q8TAM2 541 aa18.46■□□□□ 0.55
SSSCA1-201ENST00000309328 SNRNP25Q9BV90 132 aaKnown RBP18.46■□□□□ 0.55
SSSCA1-201ENST00000309328 LACRTQ9GZZ8 138 aa18.46■□□□□ 0.55
SSSCA1-201ENST00000309328 TBC1D17Q9HA65 648 aa18.46■□□□□ 0.55
SSSCA1-201ENST00000309328 LTB4R2Q9NPC1 389 aa18.46■□□□□ 0.55
SSSCA1-201ENST00000309328 ANLNQ9NQW6 1124 aa18.46■□□□□ 0.55
SSSCA1-201ENST00000309328 ARHGEF4Q9NR80 690 aa18.46■□□□□ 0.55
SSSCA1-201ENST00000309328 SBDSQ9Y3A5 250 aaKnown RBP eCLIP18.46■□□□□ 0.55
SSSCA1-201ENST00000309328 H0Y626 953 aa18.45■□□□□ 0.54
SSSCA1-201ENST00000309328 I6L893 689 aaPredicted RBP18.45■□□□□ 0.54
SSSCA1-201ENST00000309328 NPC1O15118 1278 aa18.45■□□□□ 0.54
SSSCA1-201ENST00000309328 PSTPIP1O43586 416 aa18.45■□□□□ 0.54
SSSCA1-201ENST00000309328 BUB1BO60566 1050 aaPredicted RBP18.45■□□□□ 0.54
SSSCA1-201ENST00000309328 SRGAP2O75044 1071 aa18.45■□□□□ 0.54
SSSCA1-201ENST00000309328 LRIG2O94898 1065 aa18.45■□□□□ 0.54
SSSCA1-201ENST00000309328 HOXC13P31276 330 aa18.45■□□□□ 0.54
SSSCA1-201ENST00000309328 ETFBP38117 255 aa18.45■□□□□ 0.54
SSSCA1-201ENST00000309328 ARL4AP40617 200 aa18.45■□□□□ 0.54
SSSCA1-201ENST00000309328 TNFRSF4P43489 277 aa18.45■□□□□ 0.54
SSSCA1-201ENST00000309328 SOX9P48436 509 aa18.45■□□□□ 0.54
SSSCA1-201ENST00000309328 MAPKAPK2P49137 400 aa18.45■□□□□ 0.54
SSSCA1-201ENST00000309328 RPS24P62847 133 aaKnown RBP18.45■□□□□ 0.54
SSSCA1-201ENST00000309328 SEMA3BQ13214 749 aa18.45■□□□□ 0.54
SSSCA1-201ENST00000309328 PDK2Q15119 407 aa18.45■□□□□ 0.54
SSSCA1-201ENST00000309328 C6orf118Q5T5N4 469 aa18.45■□□□□ 0.54
SSSCA1-201ENST00000309328 DAAM2Q86T65 1068 aa18.45■□□□□ 0.54
SSSCA1-201ENST00000309328 RHOT1Q8IXI2 618 aa18.45■□□□□ 0.54
SSSCA1-201ENST00000309328 DDX51Q8N8A6 666 aaKnown RBP eCLIP18.45■□□□□ 0.54
SSSCA1-201ENST00000309328 TERB1Q8NA31 727 aa18.45■□□□□ 0.54
SSSCA1-201ENST00000309328 DHX35Q9H5Z1 703 aaKnown RBP18.45■□□□□ 0.54
SSSCA1-201ENST00000309328 DDX56Q9NY93 547 aaKnown RBP18.45■□□□□ 0.54
SSSCA1-201ENST00000309328 PLK2Q9NYY3 685 aa18.45■□□□□ 0.54
SSSCA1-201ENST00000309328 KIAA1522Q9P206 1035 aaPredicted RBP18.45■□□□□ 0.54
SSSCA1-201ENST00000309328 TRIOO75962 3097 aa18.45■□□□□ 0.54
SSSCA1-201ENST00000309328 TMEM110-MUSTN1A8MSY1 372 aa18.44■□□□□ 0.54
SSSCA1-201ENST00000309328 ZNF487B1APH4 448 aa18.44■□□□□ 0.54
SSSCA1-201ENST00000309328 H3BRJ5 948 aa18.44■□□□□ 0.54
SSSCA1-201ENST00000309328 STK25O00506 426 aa18.44■□□□□ 0.54
SSSCA1-201ENST00000309328 KAT7O95251 611 aa18.44■□□□□ 0.54
SSSCA1-201ENST00000309328 MOCS3O95396 460 aa18.44■□□□□ 0.54
SSSCA1-201ENST00000309328 RHOQP17081 205 aa18.44■□□□□ 0.54
SSSCA1-201ENST00000309328 GALK1P51570 392 aa18.44■□□□□ 0.54
SSSCA1-201ENST00000309328 CLCN5P51795 746 aa18.44■□□□□ 0.54
SSSCA1-201ENST00000309328 TPI1P60174 286 aa18.44■□□□□ 0.54
SSSCA1-201ENST00000309328 HSF5Q4G112 596 aaPredicted RBP18.44■□□□□ 0.54
SSSCA1-201ENST00000309328 RAB6CQ53S08 254 aa18.44■□□□□ 0.54
SSSCA1-201ENST00000309328 ODF2Q5BJF6 829 aa18.44■□□□□ 0.54
SSSCA1-201ENST00000309328 AHI1Q8N157 1196 aa18.44■□□□□ 0.54
SSSCA1-201ENST00000309328 CCAR2Q8N163 923 aaKnown RBP18.44■□□□□ 0.54
SSSCA1-201ENST00000309328 PJA1Q8NG27 643 aa18.44■□□□□ 0.54
SSSCA1-201ENST00000309328 KIAA1524Q8TCG1 905 aa18.44■□□□□ 0.54
SSSCA1-201ENST00000309328 UCMAQ8WVF2 138 aa18.44■□□□□ 0.54
SSSCA1-201ENST00000309328 BHMTQ93088 406 aa18.44■□□□□ 0.54
SSSCA1-201ENST00000309328 IGSF8Q969P0 613 aa18.44■□□□□ 0.54
SSSCA1-201ENST00000309328 ALS2CR12Q96Q35 445 aa18.44■□□□□ 0.54
SSSCA1-201ENST00000309328 PEBP4Q96S96 227 aa18.44■□□□□ 0.54
SSSCA1-201ENST00000309328 C1QTNF1Q9BXJ1 281 aa18.44■□□□□ 0.54
SSSCA1-201ENST00000309328 RAB6CQ9H0N0 254 aa18.44■□□□□ 0.54
SSSCA1-201ENST00000309328 PRDM16Q9HAZ2 1276 aa18.44■□□□□ 0.54
SSSCA1-201ENST00000309328 STAU2Q9NUL3 570 aaKnown RBP eCLIP18.44■□□□□ 0.54
SSSCA1-201ENST00000309328 TBC1D30Q9Y2I9 924 aa18.44■□□□□ 0.54
SSSCA1-201ENST00000309328 PPP2R2CQ9Y2T4 447 aa18.44■□□□□ 0.54
SSSCA1-201ENST00000309328 ALG6Q9Y672 507 aa18.44■□□□□ 0.54
SSSCA1-201ENST00000309328 MACROD2A1Z1Q3 448 aa18.43■□□□□ 0.54
SSSCA1-201ENST00000309328 TBC1D3BA6NDS4 549 aa18.43■□□□□ 0.54
SSSCA1-201ENST00000309328 GOLGA6L9A6NEM1 432 aa18.43■□□□□ 0.54
SSSCA1-201ENST00000309328 EEF2KO00418 725 aaKnown RBP18.43■□□□□ 0.54
SSSCA1-201ENST00000309328 RARAP10276 462 aa18.43■□□□□ 0.54
SSSCA1-201ENST00000309328 COMTP21964 271 aa18.43■□□□□ 0.54
SSSCA1-201ENST00000309328 IL1R2P27930 398 aa18.43■□□□□ 0.54
SSSCA1-201ENST00000309328 EPHB2P29323 1055 aa18.43■□□□□ 0.54
SSSCA1-201ENST00000309328 RPS9P46781 194 aaKnown RBP18.43■□□□□ 0.54
SSSCA1-201ENST00000309328 CCINQ13939 588 aa18.43■□□□□ 0.54
SSSCA1-201ENST00000309328 KRT81Q14533 505 aa18.43■□□□□ 0.54
SSSCA1-201ENST00000309328 UBXN2BQ14CS0 331 aa18.43■□□□□ 0.54
SSSCA1-201ENST00000309328 PON2Q15165 354 aa18.43■□□□□ 0.54
SSSCA1-201ENST00000309328 RWDD4Q6NW29 188 aaKnown RBP18.43■□□□□ 0.54
SSSCA1-201ENST00000309328 TXNDC11Q6PKC3 985 aa18.43■□□□□ 0.54
SSSCA1-201ENST00000309328 CYP4V2Q6ZWL3 525 aaPredicted RBP18.43■□□□□ 0.54
SSSCA1-201ENST00000309328 TRMT11Q7Z4G4 463 aaKnown RBP18.43■□□□□ 0.54
SSSCA1-201ENST00000309328 C14orf80Q86SX3 495 aa18.43■□□□□ 0.54
SSSCA1-201ENST00000309328 PHTF2Q8N3S3 785 aa18.43■□□□□ 0.54
SSSCA1-201ENST00000309328 CARNMT1Q8N4J0 409 aa18.43■□□□□ 0.54
SSSCA1-201ENST00000309328 NAT16Q8N8M0 369 aa18.43■□□□□ 0.54
SSSCA1-201ENST00000309328 CHFRQ96EP1 664 aa18.43■□□□□ 0.54
SSSCA1-201ENST00000309328 TMEM248Q9NWD8 314 aa18.43■□□□□ 0.54
SSSCA1-201ENST00000309328 SIT1Q9Y3P8 196 aa18.43■□□□□ 0.54
SSSCA1-201ENST00000309328 COL4A2P08572 1712 aa18.43■□□□□ 0.54
SSSCA1-201ENST00000309328 F5P12259 2224 aa18.42■□□□□ 0.54
SSSCA1-201ENST00000309328 CXorf51AA0A1B0GTR3 108 aa18.42■□□□□ 0.54
SSSCA1-201ENST00000309328 FAM170BA6NMN3 283 aa18.42■□□□□ 0.54
SSSCA1-201ENST00000309328 WASH4PA8MWX3 477 aa18.42■□□□□ 0.54
SSSCA1-201ENST00000309328 DAPK3O43293 454 aa18.42■□□□□ 0.54
SSSCA1-201ENST00000309328 BUB1O43683 1085 aa18.42■□□□□ 0.54
SSSCA1-201ENST00000309328 CREB3O43889 395 aa18.42■□□□□ 0.54
SSSCA1-201ENST00000309328 CISD3P0C7P0 127 aa18.42■□□□□ 0.54
SSSCA1-201ENST00000309328 PABPC1P11940 636 aaKnown RBP18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms