RNA–Protein interactions for RNA: ENST00000308077.9

PTCD2-201, Transcript of pentatricopeptide repeat domain 2, humanhuman

TSL 1 (best)

Gene PTCD2, Length 2,195 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2-201ENST00000308077 IFNB1P01574 187 aa7.18□□□□□ -1.26
PTCD2-201ENST00000308077 ADH1AP07327 375 aa7.18□□□□□ -1.26
PTCD2-201ENST00000308077 HMBSP08397 361 aa7.18□□□□□ -1.26
PTCD2-201ENST00000308077 ALADP13716 330 aa7.18□□□□□ -1.26
PTCD2-201ENST00000308077 RBL1P28749 1068 aa7.18□□□□□ -1.26
PTCD2-201ENST00000308077 HOXC13P31276 330 aa7.18□□□□□ -1.26
PTCD2-201ENST00000308077 ATP5OP48047 213 aa7.18□□□□□ -1.26
PTCD2-201ENST00000308077 CLCN4P51793 760 aa7.18□□□□□ -1.26
PTCD2-201ENST00000308077 EPHB3P54753 998 aa7.18□□□□□ -1.26
PTCD2-201ENST00000308077 PLTPP55058 493 aa7.18□□□□□ -1.26
PTCD2-201ENST00000308077 RIPPLY3P57055 190 aa7.18□□□□□ -1.26
PTCD2-201ENST00000308077 LMNB2Q03252 620 aa7.18□□□□□ -1.26
PTCD2-201ENST00000308077 UBE3AQ05086 875 aa7.18□□□□□ -1.26
PTCD2-201ENST00000308077 VEPH1Q14D04 833 aa7.18□□□□□ -1.26
PTCD2-201ENST00000308077 PAFAH1B3Q15102 231 aaKnown RBP7.18□□□□□ -1.26
PTCD2-201ENST00000308077 EMBQ6PCB8 327 aa7.18□□□□□ -1.26
PTCD2-201ENST00000308077 DARS2Q6PI48 645 aaKnown RBP7.18□□□□□ -1.26
PTCD2-201ENST00000308077 PRR23BQ6ZRT6 265 aa7.18□□□□□ -1.26
PTCD2-201ENST00000308077 NPWQ8N729 165 aa7.18□□□□□ -1.26
PTCD2-201ENST00000308077 FAM71DQ8N9W8 422 aa7.18□□□□□ -1.26
PTCD2-201ENST00000308077 TSEN2Q8NCE0 465 aaKnown RBP7.18□□□□□ -1.26
PTCD2-201ENST00000308077 KREMEN2Q8NCW0 462 aa7.18□□□□□ -1.26
PTCD2-201ENST00000308077 ART4Q93070 314 aa7.18□□□□□ -1.26
PTCD2-201ENST00000308077 CAVIN3Q969G5 261 aa7.18□□□□□ -1.26
PTCD2-201ENST00000308077 SNF8Q96H20 258 aa7.18□□□□□ -1.26
PTCD2-201ENST00000308077 EPAS1Q99814 870 aa7.18□□□□□ -1.26
PTCD2-201ENST00000308077 IL21Q9HBE4 155 aa7.18□□□□□ -1.26
PTCD2-201ENST00000308077 USP29Q9HBJ7 922 aa7.18□□□□□ -1.26
PTCD2-201ENST00000308077 PCDH9Q9HC56 1237 aa7.18□□□□□ -1.26
PTCD2-201ENST00000308077 WHRNQ9P202 907 aa7.18□□□□□ -1.26
PTCD2-201ENST00000308077 BCLAF3A2AJT9 711 aaKnown RBP7.18□□□□□ -1.26
PTCD2-201ENST00000308077 MAP2K7O14733 419 aa7.18□□□□□ -1.26
PTCD2-201ENST00000308077 GLUD1P00367 558 aa7.18□□□□□ -1.26
PTCD2-201ENST00000308077 OAS1P00973 400 aaKnown RBP7.18□□□□□ -1.26
PTCD2-201ENST00000308077 F11P03951 625 aa7.18□□□□□ -1.26
PTCD2-201ENST00000308077 RB1P06400 928 aa7.18□□□□□ -1.26
PTCD2-201ENST00000308077 C8AP07357 584 aa7.18□□□□□ -1.26
PTCD2-201ENST00000308077 SRGAP2BP0DMP2 458 aa7.18□□□□□ -1.26
PTCD2-201ENST00000308077 VAV1P15498 845 aa7.18□□□□□ -1.26
PTCD2-201ENST00000308077 EPHB2P29323 1055 aa7.18□□□□□ -1.26
PTCD2-201ENST00000308077 TNNT3P45378 269 aaPredicted RBP7.18□□□□□ -1.26
PTCD2-201ENST00000308077 NR2C2P49116 596 aa7.18□□□□□ -1.26
PTCD2-201ENST00000308077 IRAK1P51617 712 aa7.18□□□□□ -1.26
PTCD2-201ENST00000308077 KCNQ1P51787 676 aa7.18□□□□□ -1.26
PTCD2-201ENST00000308077 ZNF135P52742 658 aaPredicted RBP7.18□□□□□ -1.26
PTCD2-201ENST00000308077 ITGA8P53708 1063 aa7.18□□□□□ -1.26
PTCD2-201ENST00000308077 NRG1Q02297 640 aaPredicted RBP7.18□□□□□ -1.26
PTCD2-201ENST00000308077 CASP8Q14790 479 aa7.18□□□□□ -1.26
PTCD2-201ENST00000308077 P3H1Q32P28 736 aa7.18□□□□□ -1.26
PTCD2-201ENST00000308077 MS4A13Q5J8X5 152 aa7.18□□□□□ -1.26
PTCD2-201ENST00000308077 HECTD3Q5T447 861 aa7.18□□□□□ -1.26
PTCD2-201ENST00000308077 RHBDF2Q6PJF5 856 aa7.18□□□□□ -1.26
PTCD2-201ENST00000308077 TMC8Q8IU68 726 aa7.18□□□□□ -1.26
PTCD2-201ENST00000308077 ZNF683Q8IZ20 524 aa7.18□□□□□ -1.26
PTCD2-201ENST00000308077 CCDC89Q8N998 374 aa7.18□□□□□ -1.26
PTCD2-201ENST00000308077 RSAD2Q8WXG1 361 aa7.18□□□□□ -1.26
PTCD2-201ENST00000308077 RTP4Q96DX8 246 aa7.18□□□□□ -1.26
PTCD2-201ENST00000308077 DOCK6Q96HP0 2047 aa7.18□□□□□ -1.26
PTCD2-201ENST00000308077 QKIQ96PU8 341 aaKnown RBP eCLIP7.18□□□□□ -1.26
PTCD2-201ENST00000308077 TGS1Q96RS0 853 aaKnown RBP7.18□□□□□ -1.26
PTCD2-201ENST00000308077 EMILIN2Q9BXX0 1053 aa7.18□□□□□ -1.26
PTCD2-201ENST00000308077 LRRC3Q9BY71 257 aa7.18□□□□□ -1.26
PTCD2-201ENST00000308077 KLC2Q9H0B6 622 aa7.18□□□□□ -1.26
PTCD2-201ENST00000308077 RNF38Q9H0F5 515 aa7.18□□□□□ -1.26
PTCD2-201ENST00000308077 ADAM7Q9H2U9 754 aa7.18□□□□□ -1.26
PTCD2-201ENST00000308077 PRDM16Q9HAZ2 1276 aa7.18□□□□□ -1.26
PTCD2-201ENST00000308077 TRPM5Q9NZQ8 1165 aa7.18□□□□□ -1.26
PTCD2-201ENST00000308077 NYNRINQ9P2P1 1898 aaKnown RBP7.18□□□□□ -1.26
PTCD2-201ENST00000308077 PCDHA11Q9Y5I1 949 aa7.18□□□□□ -1.26
PTCD2-201ENST00000308077 NUP205Q92621 2012 aa7.17□□□□□ -1.26
PTCD2-201ENST00000308077 E9PAM4 449 aa7.17□□□□□ -1.26
PTCD2-201ENST00000308077 DNALI1O14645 258 aaPredicted RBP7.17□□□□□ -1.26
PTCD2-201ENST00000308077 KCNN4O15554 427 aa7.17□□□□□ -1.26
PTCD2-201ENST00000308077 APOEP02649 317 aa7.17□□□□□ -1.26
PTCD2-201ENST00000308077 SLC2A3P11169 496 aa7.17□□□□□ -1.26
PTCD2-201ENST00000308077 RPL22P35268 128 aaKnown RBP7.17□□□□□ -1.26
PTCD2-201ENST00000308077 ATP5C1P36542 298 aaKnown RBP7.17□□□□□ -1.26
PTCD2-201ENST00000308077 ADCY8P40145 1251 aa7.17□□□□□ -1.26
PTCD2-201ENST00000308077 TUBP50607 506 aa7.17□□□□□ -1.26
PTCD2-201ENST00000308077 MLLT6P55198 1093 aaPredicted RBP7.17□□□□□ -1.26
PTCD2-201ENST00000308077 ERVK-21P61565 698 aa7.17□□□□□ -1.26
PTCD2-201ENST00000308077 RING1Q06587 406 aa7.17□□□□□ -1.26
PTCD2-201ENST00000308077 GPS1Q13098 491 aa7.17□□□□□ -1.26
PTCD2-201ENST00000308077 XRCC4Q13426 336 aa7.17□□□□□ -1.26
PTCD2-201ENST00000308077 TAF12Q16514 161 aa7.17□□□□□ -1.26
PTCD2-201ENST00000308077 SLC45A4Q5BKX6 768 aa7.17□□□□□ -1.26
PTCD2-201ENST00000308077 IZUMO3Q5VZ72 239 aa7.17□□□□□ -1.26
PTCD2-201ENST00000308077 NADSYN1Q6IA69 706 aa7.17□□□□□ -1.26
PTCD2-201ENST00000308077 KLHDC10Q6PID8 442 aa7.17□□□□□ -1.26
PTCD2-201ENST00000308077 CCDC149Q6ZUS6 474 aa7.17□□□□□ -1.26
PTCD2-201ENST00000308077 GAREM2Q75VX8 874 aa7.17□□□□□ -1.26
PTCD2-201ENST00000308077 ATP6V0D2Q8N8Y2 350 aa7.17□□□□□ -1.26
PTCD2-201ENST00000308077 SLC22A17Q8WUG5 538 aa7.17□□□□□ -1.26
PTCD2-201ENST00000308077 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP7.17□□□□□ -1.26
PTCD2-201ENST00000308077 WBP2Q969T9 261 aa7.17□□□□□ -1.26
PTCD2-201ENST00000308077 TBC1D31Q96DN5 1066 aa7.17□□□□□ -1.26
PTCD2-201ENST00000308077 MYEOVQ96EZ4 313 aa7.17□□□□□ -1.26
PTCD2-201ENST00000308077 BTN2A3PQ96KV6 586 aa7.17□□□□□ -1.26
PTCD2-201ENST00000308077 C1orf74Q96LT6 269 aa7.17□□□□□ -1.26
PTCD2-201ENST00000308077 SLC22A12Q96S37 553 aa7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms