RNA–Protein interactions for RNA: ENST00000307859.4

TRIM40-205, Transcript of tripartite motif containing 40, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRIM40, Length 1,640 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-205ENST00000307859 ITGB8P26012 769 aa12.23□□□□□ -0.45
TRIM40-205ENST00000307859 PSEN1P49768 467 aa12.23□□□□□ -0.45
TRIM40-205ENST00000307859 RPL10AP62906 217 aaKnown RBP12.23□□□□□ -0.45
TRIM40-205ENST00000307859 PPP2R2AP63151 447 aa12.23□□□□□ -0.45
TRIM40-205ENST00000307859 GALNT2Q10471 571 aa12.23□□□□□ -0.45
TRIM40-205ENST00000307859 SEMA5AQ13591 1074 aa12.23□□□□□ -0.45
TRIM40-205ENST00000307859 TPSAB1Q15661 275 aa12.23□□□□□ -0.45
TRIM40-205ENST00000307859 PSMD5Q16401 504 aa12.23□□□□□ -0.45
TRIM40-205ENST00000307859 LONRF1Q17RB8 773 aa12.23□□□□□ -0.45
TRIM40-205ENST00000307859 VPS52Q8N1B4 723 aa12.23□□□□□ -0.45
TRIM40-205ENST00000307859 CCDC33Q8N5R6 958 aa12.23□□□□□ -0.45
TRIM40-205ENST00000307859 NPWQ8N729 165 aa12.23□□□□□ -0.45
TRIM40-205ENST00000307859 HDAC11Q96DB2 347 aa12.23□□□□□ -0.45
TRIM40-205ENST00000307859 SLC39A13Q96H72 371 aa12.23□□□□□ -0.45
TRIM40-205ENST00000307859 CCDC77Q9BR77 488 aa12.23□□□□□ -0.45
TRIM40-205ENST00000307859 BRD8Q9H0E9 1235 aa12.23□□□□□ -0.45
TRIM40-205ENST00000307859 EPHX3Q9H6B9 360 aa12.23□□□□□ -0.45
TRIM40-205ENST00000307859 ETNK1Q9HBU6 452 aa12.23□□□□□ -0.45
TRIM40-205ENST00000307859 LGALS13Q9UHV8 139 aa12.23□□□□□ -0.45
TRIM40-205ENST00000307859 SLC12A6Q9UHW9 1150 aa12.23□□□□□ -0.45
TRIM40-205ENST00000307859 TLR6Q9Y2C9 796 aa12.23□□□□□ -0.45
TRIM40-205ENST00000307859 SLC27A5Q9Y2P5 690 aa12.23□□□□□ -0.45
TRIM40-205ENST00000307859 CDY1Q9Y6F8 540 aa12.23□□□□□ -0.45
TRIM40-205ENST00000307859 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.23□□□□□ -0.45
TRIM40-205ENST00000307859 WDR27A2RRH5 827 aa12.22□□□□□ -0.45
TRIM40-205ENST00000307859 SMIM23A6NLE4 172 aa12.22□□□□□ -0.45
TRIM40-205ENST00000307859 RNF103O00237 685 aa12.22□□□□□ -0.45
TRIM40-205ENST00000307859 ADAM12O43184 909 aa12.22□□□□□ -0.45
TRIM40-205ENST00000307859 PAGE1O75459 146 aa12.22□□□□□ -0.45
TRIM40-205ENST00000307859 STK10O94804 968 aaKnown RBP12.22□□□□□ -0.45
TRIM40-205ENST00000307859 METTL18O95568 372 aa12.22□□□□□ -0.45
TRIM40-205ENST00000307859 ZDHHC11BP0C7U3 371 aa12.22□□□□□ -0.45
TRIM40-205ENST00000307859 ATF6P18850 670 aa12.22□□□□□ -0.45
TRIM40-205ENST00000307859 EPHB2P29323 1055 aa12.22□□□□□ -0.45
TRIM40-205ENST00000307859 SERPINB6P35237 376 aa12.22□□□□□ -0.45
TRIM40-205ENST00000307859 SLCO1A2P46721 670 aa12.22□□□□□ -0.45
TRIM40-205ENST00000307859 GPX6P59796 221 aa12.22□□□□□ -0.45
TRIM40-205ENST00000307859 DEFB103AP81534 67 aa12.22□□□□□ -0.45
TRIM40-205ENST00000307859 PPIDQ08752 370 aaKnown RBP12.22□□□□□ -0.45
TRIM40-205ENST00000307859 DUSP4Q13115 394 aa12.22□□□□□ -0.45
TRIM40-205ENST00000307859 ANKRD20A2Q5SQ80 823 aa12.22□□□□□ -0.45
TRIM40-205ENST00000307859 ANKRD20A1Q5TYW2 823 aa12.22□□□□□ -0.45
TRIM40-205ENST00000307859 ANKRD20A3Q5VUR7 823 aa12.22□□□□□ -0.45
TRIM40-205ENST00000307859 ARHGEF18Q6ZSZ5 1173 aa12.22□□□□□ -0.45
TRIM40-205ENST00000307859 TP53INP2Q8IXH6 220 aa12.22□□□□□ -0.45
TRIM40-205ENST00000307859 CMTR2Q8IYT2 770 aaKnown RBP12.22□□□□□ -0.45
TRIM40-205ENST00000307859 SLC39A11Q8N1S5 342 aa12.22□□□□□ -0.45
TRIM40-205ENST00000307859 RIBC1Q8N443 379 aaPredicted RBP12.22□□□□□ -0.45
TRIM40-205ENST00000307859 ATP11CQ8NB49 1132 aa12.22□□□□□ -0.45
TRIM40-205ENST00000307859 FBXO32Q969P5 355 aa12.22□□□□□ -0.45
TRIM40-205ENST00000307859 P2RY11Q96G91 374 aa12.22□□□□□ -0.45
TRIM40-205ENST00000307859 FCRL2Q96LA5 508 aaPredicted RBP12.22□□□□□ -0.45
TRIM40-205ENST00000307859 NECAB3Q96P71 396 aaPredicted RBP12.22□□□□□ -0.45
TRIM40-205ENST00000307859 SEPT5Q99719 369 aaPredicted RBP12.22□□□□□ -0.45
TRIM40-205ENST00000307859 FERMT1Q9BQL6 677 aa12.22□□□□□ -0.45
TRIM40-205ENST00000307859 HERC2P3Q9BVR0 1158 aa12.22□□□□□ -0.45
TRIM40-205ENST00000307859 TTLL2Q9BWV7 592 aa12.22□□□□□ -0.45
TRIM40-205ENST00000307859 CAPS2Q9BXY5 557 aa12.22□□□□□ -0.45
TRIM40-205ENST00000307859 PPCSQ9HAB8 311 aa12.22□□□□□ -0.45
TRIM40-205ENST00000307859 TLR8Q9NR97 1041 aaKnown RBP12.22□□□□□ -0.45
TRIM40-205ENST00000307859 OLA1Q9NTK5 396 aaKnown RBP12.22□□□□□ -0.45
TRIM40-205ENST00000307859 MIA3Q5JRA6 1907 aa12.22□□□□□ -0.45
TRIM40-205ENST00000307859 CARNS1A5YM72 827 aa12.22□□□□□ -0.45
TRIM40-205ENST00000307859 E7EVH7 732 aa12.22□□□□□ -0.45
TRIM40-205ENST00000307859 FGF10O15520 208 aaPredicted RBP12.22□□□□□ -0.45
TRIM40-205ENST00000307859 CDH16O75309 829 aa12.22□□□□□ -0.45
TRIM40-205ENST00000307859 SOD2P04179 222 aa12.22□□□□□ -0.45
TRIM40-205ENST00000307859 APRTP07741 180 aa12.22□□□□□ -0.45
TRIM40-205ENST00000307859 SLC2A3P11169 496 aa12.22□□□□□ -0.45
TRIM40-205ENST00000307859 CSF2RAP15509 400 aa12.22□□□□□ -0.45
TRIM40-205ENST00000307859 MX2P20592 715 aa12.22□□□□□ -0.45
TRIM40-205ENST00000307859 HPDP32754 393 aaPredicted RBP12.22□□□□□ -0.45
TRIM40-205ENST00000307859 FDFT1P37268 417 aa12.22□□□□□ -0.45
TRIM40-205ENST00000307859 MAGEA3P43357 314 aa12.22□□□□□ -0.45
TRIM40-205ENST00000307859 ATP1A2P50993 1020 aa12.22□□□□□ -0.45
TRIM40-205ENST00000307859 WDR5P61964 334 aaKnown RBP12.22□□□□□ -0.45
TRIM40-205ENST00000307859 IFI35P80217 286 aaPredicted RBP12.22□□□□□ -0.45
TRIM40-205ENST00000307859 FPGSQ05932 587 aa12.22□□□□□ -0.45
TRIM40-205ENST00000307859 AP1B1Q10567 949 aa12.22□□□□□ -0.45
TRIM40-205ENST00000307859 WASHC5Q12768 1159 aa12.22□□□□□ -0.45
TRIM40-205ENST00000307859 TAF10Q12962 218 aa12.22□□□□□ -0.45
TRIM40-205ENST00000307859 RASA2Q15283 850 aa12.22□□□□□ -0.45
TRIM40-205ENST00000307859 BBS9Q3SYG4 887 aa12.22□□□□□ -0.45
TRIM40-205ENST00000307859 CCDC38Q502W7 563 aa12.22□□□□□ -0.45
TRIM40-205ENST00000307859 HP1BP3Q5SSJ5 553 aaPredicted RBP12.22□□□□□ -0.45
TRIM40-205ENST00000307859 FAXCQ5TGI0 409 aa12.22□□□□□ -0.45
TRIM40-205ENST00000307859 TDRPQ86YL5 185 aa12.22□□□□□ -0.45
TRIM40-205ENST00000307859 ANKMY2Q8IV38 441 aa12.22□□□□□ -0.45
TRIM40-205ENST00000307859 NETO2Q8NC67 525 aa12.22□□□□□ -0.45
TRIM40-205ENST00000307859 FBXO36Q8NEA4 188 aa12.22□□□□□ -0.45
TRIM40-205ENST00000307859 GPR152Q8TDT2 470 aa12.22□□□□□ -0.45
TRIM40-205ENST00000307859 PYROXD1Q8WU10 500 aa12.22□□□□□ -0.45
TRIM40-205ENST00000307859 C1orf74Q96LT6 269 aa12.22□□□□□ -0.45
TRIM40-205ENST00000307859 ZNF558Q96NG5 402 aa12.22□□□□□ -0.45
TRIM40-205ENST00000307859 EIF2B3Q9NR50 452 aaKnown RBP12.22□□□□□ -0.45
TRIM40-205ENST00000307859 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.22□□□□□ -0.45
TRIM40-205ENST00000307859 HSFX1Q9UBD0 423 aa12.22□□□□□ -0.45
TRIM40-205ENST00000307859 FETUBQ9UGM5 382 aa12.22□□□□□ -0.45
TRIM40-205ENST00000307859 NUDT5Q9UKK9 219 aa12.22□□□□□ -0.45
TRIM40-205ENST00000307859 TEX264Q9Y6I9 313 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms