RNA–Protein interactions for RNA: ENST00000307142.8

SYNPO2-201, Transcript of synaptopodin 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYNPO2, Length 7,295 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-201ENST00000307142 CLEC17AQ6ZS10 378 aa10.94□□□□□ -0.66
SYNPO2-201ENST00000307142 CEP19Q96LK0 163 aa10.94□□□□□ -0.66
SYNPO2-201ENST00000307142 NDEL1Q9GZM8 345 aa10.94□□□□□ -0.66
SYNPO2-201ENST00000307142 SCHIP1Q9P0W5 487 aaPredicted RBP10.94□□□□□ -0.66
SYNPO2-201ENST00000307142 TRHDEQ9UKU6 1024 aa10.94□□□□□ -0.66
SYNPO2-201ENST00000307142 LTBP3Q9NS15 1303 aa10.94□□□□□ -0.66
SYNPO2-201ENST00000307142 KRT87PA6NCN2 255 aa10.94□□□□□ -0.66
SYNPO2-201ENST00000307142 KCNK1O00180 336 aa10.94□□□□□ -0.66
SYNPO2-201ENST00000307142 ENO3P13929 434 aaPredicted RBP10.94□□□□□ -0.66
SYNPO2-201ENST00000307142 FNTAP49354 379 aa10.94□□□□□ -0.66
SYNPO2-201ENST00000307142 CNGA2Q16280 664 aa10.94□□□□□ -0.66
SYNPO2-201ENST00000307142 HLA-DQA1Q5Y7H0 255 aa10.94□□□□□ -0.66
SYNPO2-201ENST00000307142 CCNJLQ8IV13 435 aa10.94□□□□□ -0.66
SYNPO2-201ENST00000307142 CAMKK1Q8N5S9 505 aa10.94□□□□□ -0.66
SYNPO2-201ENST00000307142 SEZ6LQ9BYH1 1024 aa10.94□□□□□ -0.66
SYNPO2-201ENST00000307142 KIAA1522Q9P206 1035 aaPredicted RBP10.94□□□□□ -0.66
SYNPO2-201ENST00000307142 RPS6KB2Q9UBS0 482 aa10.94□□□□□ -0.66
SYNPO2-201ENST00000307142 A0A087X0B3 334 aa10.94□□□□□ -0.66
SYNPO2-201ENST00000307142 KANSL1LA0AUZ9 987 aa10.94□□□□□ -0.66
SYNPO2-201ENST00000307142 RNF103O00237 685 aa10.94□□□□□ -0.66
SYNPO2-201ENST00000307142 PSMD8P48556 350 aa10.94□□□□□ -0.66
SYNPO2-201ENST00000307142 GRSF1Q12849 480 aaKnown RBP eCLIP10.94□□□□□ -0.66
SYNPO2-201ENST00000307142 CNKSR3Q6P9H4 555 aa10.94□□□□□ -0.66
SYNPO2-201ENST00000307142 FBXO38Q6PIJ6 1188 aa10.94□□□□□ -0.66
SYNPO2-201ENST00000307142 LVRNQ6Q4G3 990 aa10.94□□□□□ -0.66
SYNPO2-201ENST00000307142 CXorf38Q8TB03 319 aa10.94□□□□□ -0.66
SYNPO2-201ENST00000307142 INPP4AQ96PE3 977 aaPredicted RBP10.94□□□□□ -0.66
SYNPO2-201ENST00000307142 DCDC2Q9UHG0 476 aa10.94□□□□□ -0.66
SYNPO2-201ENST00000307142 INSL6Q9Y581 213 aa10.94□□□□□ -0.66
SYNPO2-201ENST00000307142 CSHL1Q14406 222 aa10.94□□□□□ -0.66
SYNPO2-201ENST00000307142 ZNF618Q5T7W0 954 aa10.94□□□□□ -0.66
SYNPO2-201ENST00000307142 PIGZQ86VD9 579 aa10.94□□□□□ -0.66
SYNPO2-201ENST00000307142 ARMC2Q8NEN0 867 aa10.94□□□□□ -0.66
SYNPO2-201ENST00000307142 UNKQ9C0B0 810 aaKnown RBP10.94□□□□□ -0.66
SYNPO2-201ENST00000307142 CARD9Q9H257 536 aa10.94□□□□□ -0.66
SYNPO2-201ENST00000307142 PPCSQ9HAB8 311 aa10.94□□□□□ -0.66
SYNPO2-201ENST00000307142 TBC1D14Q9P2M4 693 aa10.94□□□□□ -0.66
SYNPO2-201ENST00000307142 GPN3Q9UHW5 284 aaPredicted RBP10.94□□□□□ -0.66
SYNPO2-201ENST00000307142 TRIM49D1C9J1S8 452 aa10.93□□□□□ -0.66
SYNPO2-201ENST00000307142 CYP20A1Q6UW02 462 aa10.93□□□□□ -0.66
SYNPO2-201ENST00000307142 VCPIP1Q96JH7 1222 aa10.93□□□□□ -0.66
SYNPO2-201ENST00000307142 MLPHQ9BV36 600 aaPredicted RBP10.93□□□□□ -0.66
SYNPO2-201ENST00000307142 EXO5Q9H790 373 aa10.93□□□□□ -0.66
SYNPO2-201ENST00000307142 PLK2Q9NYY3 685 aa10.93□□□□□ -0.66
SYNPO2-201ENST00000307142 VPS51Q9UID3 782 aa10.93□□□□□ -0.66
SYNPO2-201ENST00000307142 MYH1P12882 1939 aa10.93□□□□□ -0.66
SYNPO2-201ENST00000307142 MYH6P13533 1939 aa10.93□□□□□ -0.66
SYNPO2-201ENST00000307142 IRS2Q9Y4H2 1338 aa10.93□□□□□ -0.66
SYNPO2-201ENST00000307142 GMNCA6NCL1 334 aa10.93□□□□□ -0.66
SYNPO2-201ENST00000307142 PALM2-AKAP2B1ALY0 433 aaPredicted RBP10.93□□□□□ -0.66
SYNPO2-201ENST00000307142 F8W810 466 aa10.93□□□□□ -0.66
SYNPO2-201ENST00000307142 ZNF862O60290 1169 aa10.93□□□□□ -0.66
SYNPO2-201ENST00000307142 PPP1R11O60927 126 aaPredicted RBP10.93□□□□□ -0.66
SYNPO2-201ENST00000307142 KATNA1O75449 491 aa10.93□□□□□ -0.66
SYNPO2-201ENST00000307142 ATP5HO75947 161 aa10.93□□□□□ -0.66
SYNPO2-201ENST00000307142 FMO4P31512 558 aa10.93□□□□□ -0.66
SYNPO2-201ENST00000307142 ALDH6A1Q02252 535 aaKnown RBP10.93□□□□□ -0.66
SYNPO2-201ENST00000307142 PPP3CAQ08209 521 aa10.93□□□□□ -0.66
SYNPO2-201ENST00000307142 CDH17Q12864 832 aa10.93□□□□□ -0.66
SYNPO2-201ENST00000307142 PPP1R26Q5T8A7 1209 aaPredicted RBP10.93□□□□□ -0.66
SYNPO2-201ENST00000307142 CCDC90BQ9GZT6 254 aa10.93□□□□□ -0.66
SYNPO2-201ENST00000307142 UNC93B1Q9H1C4 597 aa10.93□□□□□ -0.66
SYNPO2-201ENST00000307142 GMIPQ9P107 970 aa10.93□□□□□ -0.66
SYNPO2-201ENST00000307142 DEC1Q9P2X7 70 aa10.93□□□□□ -0.66
SYNPO2-201ENST00000307142 DUSP10Q9Y6W6 482 aa10.93□□□□□ -0.66
SYNPO2-201ENST00000307142 NRXN3Q9Y4C0 1643 aa10.93□□□□□ -0.66
SYNPO2-201ENST00000307142 PER2O15055 1255 aa10.93□□□□□ -0.66
SYNPO2-201ENST00000307142 TAF10Q12962 218 aa10.93□□□□□ -0.66
SYNPO2-201ENST00000307142 TRIM60Q495X7 471 aa10.93□□□□□ -0.66
SYNPO2-201ENST00000307142 PCYOX1LQ8NBM8 494 aa10.93□□□□□ -0.66
SYNPO2-201ENST00000307142 SPPL2BQ8TCT7 592 aa10.93□□□□□ -0.66
SYNPO2-201ENST00000307142 DUSP16Q9BY84 665 aa10.93□□□□□ -0.66
SYNPO2-201ENST00000307142 KCPQ6ZWJ8 1503 aa10.93□□□□□ -0.66
SYNPO2-201ENST00000307142 MAGEB16A2A368 324 aa10.93□□□□□ -0.66
SYNPO2-201ENST00000307142 IGF2BP3O00425 579 aaKnown RBP eCLIP10.93□□□□□ -0.66
SYNPO2-201ENST00000307142 TSPAN1O60635 241 aa10.93□□□□□ -0.66
SYNPO2-201ENST00000307142 EIF2S1P05198 315 aaKnown RBP10.93□□□□□ -0.66
SYNPO2-201ENST00000307142 KRT16P08779 473 aa10.93□□□□□ -0.66
SYNPO2-201ENST00000307142 GYS2P54840 703 aa10.93□□□□□ -0.66
SYNPO2-201ENST00000307142 SULT2A1Q06520 285 aa10.93□□□□□ -0.66
SYNPO2-201ENST00000307142 IFNEQ86WN2 208 aa10.93□□□□□ -0.66
SYNPO2-201ENST00000307142 CLEC4DQ8WXI8 215 aa10.93□□□□□ -0.66
SYNPO2-201ENST00000307142 CCDC126Q96EE4 140 aa10.93□□□□□ -0.66
SYNPO2-201ENST00000307142 ZFYVE19Q96K21 471 aa10.93□□□□□ -0.66
SYNPO2-201ENST00000307142 TMPRSS4Q9NRS4 437 aa10.93□□□□□ -0.66
SYNPO2-201ENST00000307142 ZNF112Q9UJU3 913 aa10.93□□□□□ -0.66
SYNPO2-201ENST00000307142 CHUKO15111 745 aa10.93□□□□□ -0.66
SYNPO2-201ENST00000307142 GRM6O15303 877 aa10.93□□□□□ -0.66
SYNPO2-201ENST00000307142 GUCA1AP43080 201 aaPredicted RBP10.93□□□□□ -0.66
SYNPO2-201ENST00000307142 PRUNE1Q86TP1 453 aa10.93□□□□□ -0.66
SYNPO2-201ENST00000307142 FAM35AQ86V20 835 aa10.93□□□□□ -0.66
SYNPO2-201ENST00000307142 HORMAD1Q86X24 394 aa10.93□□□□□ -0.66
SYNPO2-201ENST00000307142 LRRC52Q8N7C0 313 aa10.93□□□□□ -0.66
SYNPO2-201ENST00000307142 GLMNQ92990 594 aa10.93□□□□□ -0.66
SYNPO2-201ENST00000307142 PANX3Q96QZ0 392 aa10.93□□□□□ -0.66
SYNPO2-201ENST00000307142 ACOX2Q99424 681 aa10.93□□□□□ -0.66
SYNPO2-201ENST00000307142 BPIFA1Q9NP55 256 aa10.93□□□□□ -0.66
SYNPO2-201ENST00000307142 CATSPERZQ9NTU4 200 aa10.93□□□□□ -0.66
SYNPO2-201ENST00000307142 H2AFY2Q9P0M6 372 aaPredicted RBP10.93□□□□□ -0.66
SYNPO2-201ENST00000307142 COL20A1Q9P218 1284 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms