RNA–Protein interactions for RNA: ENST00000306177.9

USP42-201, Transcript of ubiquitin specific peptidase 42, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP42, Length 5,155 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-201ENST00000306177 CDT1Q9H211 546 aa16.28■□□□□ 0.2
USP42-201ENST00000306177 CHADO15335 359 aa16.27■□□□□ 0.2
USP42-201ENST00000306177 SYNCRIPO60506 623 aaKnown RBP16.27■□□□□ 0.2
USP42-201ENST00000306177 CABYRO75952 493 aa16.27■□□□□ 0.2
USP42-201ENST00000306177 KRT8P05787 483 aa16.27■□□□□ 0.2
USP42-201ENST00000306177 ATP6V1B1P15313 513 aa16.27■□□□□ 0.2
USP42-201ENST00000306177 MSH3P20585 1137 aa16.27■□□□□ 0.2
USP42-201ENST00000306177 SKIV2L2P42285 1042 aaKnown RBP16.27■□□□□ 0.2
USP42-201ENST00000306177 RTP1P59025 263 aa16.27■□□□□ 0.2
USP42-201ENST00000306177 GLT6D1Q7Z4J2 308 aa16.27■□□□□ 0.2
USP42-201ENST00000306177 BAP1Q92560 729 aa16.27■□□□□ 0.2
USP42-201ENST00000306177 APBA2Q99767 749 aa16.27■□□□□ 0.2
USP42-201ENST00000306177 HMX1Q9NP08 348 aaPredicted RBP16.27■□□□□ 0.2
USP42-201ENST00000306177 ACP6Q9NPH0 428 aa16.27■□□□□ 0.2
USP42-201ENST00000306177 FMN2Q9NZ56 1722 aa16.27■□□□□ 0.2
USP42-201ENST00000306177 RAD51BO15315 384 aa16.27■□□□□ 0.2
USP42-201ENST00000306177 FGF10O15520 208 aaPredicted RBP16.27■□□□□ 0.2
USP42-201ENST00000306177 BAIAP3O94812 1187 aa16.27■□□□□ 0.2
USP42-201ENST00000306177 NPR3P17342 541 aa16.27■□□□□ 0.2
USP42-201ENST00000306177 MLH1P40692 756 aa16.27■□□□□ 0.2
USP42-201ENST00000306177 TBL3Q12788 808 aaKnown RBP16.27■□□□□ 0.2
USP42-201ENST00000306177 SLC30A9Q6PML9 568 aa16.27■□□□□ 0.2
USP42-201ENST00000306177 CES3Q6UWW8 571 aa16.27■□□□□ 0.2
USP42-201ENST00000306177 C6orf203Q9P0P8 240 aaPredicted RBP16.27■□□□□ 0.2
USP42-201ENST00000306177 UBA2Q9UBT2 640 aaPredicted RBP16.27■□□□□ 0.2
USP42-201ENST00000306177 CCNT2O60583 730 aaKnown RBP16.27■□□□□ 0.19
USP42-201ENST00000306177 SNHG28P0DPA3 235 aa16.27■□□□□ 0.19
USP42-201ENST00000306177 PCNAP12004 261 aa16.27■□□□□ 0.19
USP42-201ENST00000306177 ALADP13716 330 aa16.27■□□□□ 0.19
USP42-201ENST00000306177 CYP2A7P20853 494 aa16.27■□□□□ 0.19
USP42-201ENST00000306177 TNFRSF8P28908 595 aa16.27■□□□□ 0.19
USP42-201ENST00000306177 SCNN1GP51170 649 aa16.27■□□□□ 0.19
USP42-201ENST00000306177 C15orf59Q2T9L4 293 aaPredicted RBP16.27■□□□□ 0.19
USP42-201ENST00000306177 WSCD1Q658N2 575 aa16.27■□□□□ 0.19
USP42-201ENST00000306177 MOB2Q70IA6 237 aa16.27■□□□□ 0.19
USP42-201ENST00000306177 TMPRSS6Q8IU80 811 aa16.27■□□□□ 0.19
USP42-201ENST00000306177 PHACTR4Q8IZ21 702 aa16.27■□□□□ 0.19
USP42-201ENST00000306177 UROC1Q96N76 676 aa16.27■□□□□ 0.19
USP42-201ENST00000306177 ROBO3Q96MS0 1386 aa16.27■□□□□ 0.19
USP42-201ENST00000306177 TMEM114B3SHH9 223 aa16.27■□□□□ 0.19
USP42-201ENST00000306177 CPSF4O95639 269 aaKnown RBP16.27■□□□□ 0.19
USP42-201ENST00000306177 IGSF6O95976 241 aa16.27■□□□□ 0.19
USP42-201ENST00000306177 HOXB8P17481 243 aaPredicted RBP16.27■□□□□ 0.19
USP42-201ENST00000306177 KLRC2P26717 231 aa16.27■□□□□ 0.19
USP42-201ENST00000306177 MMP13P45452 471 aa16.27■□□□□ 0.19
USP42-201ENST00000306177 ZNF662Q6ZS27 426 aa16.27■□□□□ 0.19
USP42-201ENST00000306177 DEFB107AQ8IZN7 70 aa16.27■□□□□ 0.19
USP42-201ENST00000306177 RIN3Q8TB24 985 aa16.27■□□□□ 0.19
USP42-201ENST00000306177 OXNAD1Q96HP4 312 aaPredicted RBP16.27■□□□□ 0.19
USP42-201ENST00000306177 CATSPER2Q96P56 530 aa16.27■□□□□ 0.19
USP42-201ENST00000306177 PDGFDQ9GZP0 370 aaPredicted RBP16.27■□□□□ 0.19
USP42-201ENST00000306177 ATXN3LQ9H3M9 355 aa16.27■□□□□ 0.19
USP42-201ENST00000306177 HPS4Q9NQG7 708 aa16.27■□□□□ 0.19
USP42-201ENST00000306177 AMHP03971 560 aa16.26■□□□□ 0.19
USP42-201ENST00000306177 SMIM10L2AP0DMW4 78 aa16.26■□□□□ 0.19
USP42-201ENST00000306177 SMIM10L2BP0DMW5 78 aa16.26■□□□□ 0.19
USP42-201ENST00000306177 FCGR1AP12314 374 aa16.26■□□□□ 0.19
USP42-201ENST00000306177 RAG1P15918 1043 aa16.26■□□□□ 0.19
USP42-201ENST00000306177 PSMC3P17980 439 aa16.26■□□□□ 0.19
USP42-201ENST00000306177 MAD2L1Q13257 205 aaPredicted RBP16.26■□□□□ 0.19
USP42-201ENST00000306177 FAM183BPQ6ZVS7 135 aa16.26■□□□□ 0.19
USP42-201ENST00000306177 PCYOX1Q9UHG3 505 aa16.26■□□□□ 0.19
USP42-201ENST00000306177 SLC15A5A6NIM6 579 aa16.26■□□□□ 0.19
USP42-201ENST00000306177 IFNA14P01570 189 aa16.26■□□□□ 0.19
USP42-201ENST00000306177 SERPINB3P29508 390 aa16.26■□□□□ 0.19
USP42-201ENST00000306177 AADACL2Q6P093 401 aa16.26■□□□□ 0.19
USP42-201ENST00000306177 KLRG1Q96E93 195 aa16.26■□□□□ 0.19
USP42-201ENST00000306177 SEPT3Q9UH03 358 aa16.26■□□□□ 0.19
USP42-201ENST00000306177 FCHO1O14526 889 aa16.26■□□□□ 0.19
USP42-201ENST00000306177 CYP1A1P04798 512 aaPredicted RBP16.26■□□□□ 0.19
USP42-201ENST00000306177 RRM2P31350 389 aa16.26■□□□□ 0.19
USP42-201ENST00000306177 AMPD2Q01433 879 aa16.26■□□□□ 0.19
USP42-201ENST00000306177 ITGB3BPQ13352 177 aaPredicted RBP16.26■□□□□ 0.19
USP42-201ENST00000306177 ECM1Q16610 540 aa16.26■□□□□ 0.19
USP42-201ENST00000306177 CXCL17Q6UXB2 119 aa16.26■□□□□ 0.19
USP42-201ENST00000306177 KYAT3Q6YP21 454 aaKnown RBP16.26■□□□□ 0.19
USP42-201ENST00000306177 CCDC81Q6ZN84 652 aa16.26■□□□□ 0.19
USP42-201ENST00000306177 PHF13Q86YI8 300 aaPredicted RBP16.26■□□□□ 0.19
USP42-201ENST00000306177 C4orf32Q8N8J7 132 aa16.26■□□□□ 0.19
USP42-201ENST00000306177 B3GALNT2Q8NCR0 500 aa16.26■□□□□ 0.19
USP42-201ENST00000306177 LENG9Q96B70 501 aa16.26■□□□□ 0.19
USP42-201ENST00000306177 CAMKK2Q96RR4 588 aa16.26■□□□□ 0.19
USP42-201ENST00000306177 POLR1EQ9GZS1 481 aaKnown RBP16.26■□□□□ 0.19
USP42-201ENST00000306177 PARVBQ9HBI1 364 aa16.26■□□□□ 0.19
USP42-201ENST00000306177 TMEM39AQ9NV64 488 aa16.26■□□□□ 0.19
USP42-201ENST00000306177 OR12D3Q9UGF7 316 aa16.26■□□□□ 0.19
USP42-201ENST00000306177 C2CD2Q9Y426 696 aa16.26■□□□□ 0.19
USP42-201ENST00000306177 A0A0A0MRY4 1105 aa16.26■□□□□ 0.19
USP42-201ENST00000306177 PPP1R11O60927 126 aaPredicted RBP16.26■□□□□ 0.19
USP42-201ENST00000306177 ATP5BP06576 529 aaKnown RBP16.26■□□□□ 0.19
USP42-201ENST00000306177 SLC2A4P14672 509 aa16.26■□□□□ 0.19
USP42-201ENST00000306177 CDK16Q00536 496 aa16.26■□□□□ 0.19
USP42-201ENST00000306177 FMO1Q01740 532 aa16.26■□□□□ 0.19
USP42-201ENST00000306177 UGCGQ16739 394 aa16.26■□□□□ 0.19
USP42-201ENST00000306177 C18orf25Q96B23 403 aaPredicted RBP16.26■□□□□ 0.19
USP42-201ENST00000306177 DTNBP1Q96EV8 351 aa16.26■□□□□ 0.19
USP42-201ENST00000306177 SPATA13Q96N96 652 aa16.26■□□□□ 0.19
USP42-201ENST00000306177 WDR41Q9HAD4 459 aa16.26■□□□□ 0.19
USP42-201ENST00000306177 RNF19AQ9NV58 838 aa16.26■□□□□ 0.19
USP42-201ENST00000306177 TMCC3Q9ULS5 477 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms