RNA–Protein interactions for RNA: ENST00000303531.11

PRKCB-201, Transcript of protein kinase C beta, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PRKCB, Length 7,969 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-201ENST00000303531 ATP13A1Q9HD20 1204 aa14.22□□□□□ -0.13
PRKCB-201ENST00000303531 RAD51BO15315 384 aa14.22□□□□□ -0.13
PRKCB-201ENST00000303531 ALDH2P05091 517 aa14.22□□□□□ -0.13
PRKCB-201ENST00000303531 ME2P23368 584 aa14.22□□□□□ -0.13
PRKCB-201ENST00000303531 PLK1P53350 603 aa14.22□□□□□ -0.13
PRKCB-201ENST00000303531 BFSP2Q13515 415 aa14.22□□□□□ -0.13
PRKCB-201ENST00000303531 TMEM26Q6ZUK4 368 aa14.22□□□□□ -0.13
PRKCB-201ENST00000303531 STK32AQ8WU08 396 aa14.22□□□□□ -0.13
PRKCB-201ENST00000303531 SERPINB11Q96P15 392 aa14.22□□□□□ -0.13
PRKCB-201ENST00000303531 CDK5RAP1Q96SZ6 601 aaKnown RBP14.22□□□□□ -0.13
PRKCB-201ENST00000303531 DMAP1Q9NPF5 467 aaPredicted RBP14.22□□□□□ -0.13
PRKCB-201ENST00000303531 FAM237AA0A1B0GTK4 181 aa14.22□□□□□ -0.13
PRKCB-201ENST00000303531 TBC1D12O60347 775 aa14.22□□□□□ -0.13
PRKCB-201ENST00000303531 PSMB9P28065 219 aa14.22□□□□□ -0.13
PRKCB-201ENST00000303531 TNFRSF8P28908 595 aa14.22□□□□□ -0.13
PRKCB-201ENST00000303531 WEE1P30291 646 aa14.22□□□□□ -0.13
PRKCB-201ENST00000303531 MAMLD1Q13495 774 aa14.22□□□□□ -0.13
PRKCB-201ENST00000303531 NAB1Q13506 487 aa14.22□□□□□ -0.13
PRKCB-201ENST00000303531 CERKQ8TCT0 537 aa14.22□□□□□ -0.13
PRKCB-201ENST00000303531 PGLYRP2Q96PD5 576 aa14.22□□□□□ -0.13
PRKCB-201ENST00000303531 KCNMB3Q9NPA1 279 aa14.22□□□□□ -0.13
PRKCB-201ENST00000303531 LTFP02788 710 aa14.21□□□□□ -0.13
PRKCB-201ENST00000303531 ERVK-10P10266 1014 aa14.21□□□□□ -0.13
PRKCB-201ENST00000303531 VCLP18206 1134 aa14.21□□□□□ -0.13
PRKCB-201ENST00000303531 BMP6P22004 513 aa14.21□□□□□ -0.13
PRKCB-201ENST00000303531 MAD2L1Q13257 205 aaPredicted RBP14.21□□□□□ -0.13
PRKCB-201ENST00000303531 MFSD4BQ5TF39 518 aa14.21□□□□□ -0.13
PRKCB-201ENST00000303531 C16orf46Q6P387 395 aa14.21□□□□□ -0.13
PRKCB-201ENST00000303531 PACS2Q86VP3 889 aa14.21□□□□□ -0.13
PRKCB-201ENST00000303531 PHACTR4Q8IZ21 702 aa14.21□□□□□ -0.13
PRKCB-201ENST00000303531 LZTR1Q8N653 840 aa14.21□□□□□ -0.13
PRKCB-201ENST00000303531 EIF1ADQ8N9N8 165 aaKnown RBP14.21□□□□□ -0.13
PRKCB-201ENST00000303531 ZSCAN18Q8TBC5 510 aaPredicted RBP14.21□□□□□ -0.13
PRKCB-201ENST00000303531 NDEL1Q9GZM8 345 aa14.21□□□□□ -0.13
PRKCB-201ENST00000303531 SATB2Q9UPW6 733 aa14.21□□□□□ -0.13
PRKCB-201ENST00000303531 TPP1O14773 563 aa14.21□□□□□ -0.13
PRKCB-201ENST00000303531 EPHB6O15197 1021 aa14.21□□□□□ -0.13
PRKCB-201ENST00000303531 PROCP04070 461 aa14.21□□□□□ -0.13
PRKCB-201ENST00000303531 ABCB1P08183 1280 aaPredicted RBP14.21□□□□□ -0.13
PRKCB-201ENST00000303531 DARSP14868 501 aaKnown RBP14.21□□□□□ -0.13
PRKCB-201ENST00000303531 TMC7Q7Z402 723 aa14.21□□□□□ -0.13
PRKCB-201ENST00000303531 IDI2Q9BXS1 227 aa14.21□□□□□ -0.13
PRKCB-201ENST00000303531 XPNPEP3Q9NQH7 507 aa14.21□□□□□ -0.13
PRKCB-201ENST00000303531 GLT6D1Q7Z4J2 308 aa14.21□□□□□ -0.13
PRKCB-201ENST00000303531 NT5DC4Q86YG4 428 aa14.21□□□□□ -0.13
PRKCB-201ENST00000303531 LNX1Q8TBB1 728 aaPredicted RBP14.21□□□□□ -0.13
PRKCB-201ENST00000303531 UTP15Q8TED0 518 aaKnown RBP14.21□□□□□ -0.13
PRKCB-201ENST00000303531 RSPH1Q8WYR4 309 aa14.21□□□□□ -0.13
PRKCB-201ENST00000303531 MMADHCQ9H3L0 296 aaPredicted RBP14.21□□□□□ -0.13
PRKCB-201ENST00000303531 NRDE2Q9H7Z3 1164 aa14.21□□□□□ -0.13
PRKCB-201ENST00000303531 PAPOLBQ9NRJ5 636 aaKnown RBP14.21□□□□□ -0.13
PRKCB-201ENST00000303531 CYP39A1Q9NYL5 469 aa14.21□□□□□ -0.13
PRKCB-201ENST00000303531 SNX8Q9Y5X2 465 aa14.21□□□□□ -0.13
PRKCB-201ENST00000303531 ASTN1O14525 1302 aa14.21□□□□□ -0.13
PRKCB-201ENST00000303531 KLRC4O43908 158 aa14.21□□□□□ -0.13
PRKCB-201ENST00000303531 PEX1O43933 1283 aa14.21□□□□□ -0.13
PRKCB-201ENST00000303531 USP17L7P0C7H9 530 aa14.21□□□□□ -0.13
PRKCB-201ENST00000303531 KHDRBS1Q07666 443 aaKnown RBP eCLIP14.21□□□□□ -0.139e-7■■□□□ 14.1
PRKCB-201ENST00000303531 KRR1Q13601 381 aaKnown RBP14.21□□□□□ -0.13
PRKCB-201ENST00000303531 LRRC55Q6ZSA7 311 aa14.21□□□□□ -0.13
PRKCB-201ENST00000303531 HOMEZQ8IX15 550 aa14.21□□□□□ -0.13
PRKCB-201ENST00000303531 TRPC4APQ8TEL6 797 aa14.21□□□□□ -0.13
PRKCB-201ENST00000303531 TKTL2Q9H0I9 626 aa14.21□□□□□ -0.13
PRKCB-201ENST00000303531 POPDC2Q9HBU9 364 aa14.21□□□□□ -0.13
PRKCB-201ENST00000303531 SH3BP4Q9P0V3 963 aa14.21□□□□□ -0.13
PRKCB-201ENST00000303531 ANKS6Q68DC2 871 aa14.21□□□□□ -0.13
PRKCB-201ENST00000303531 VGLL2Q8N8G2 317 aa14.21□□□□□ -0.13
PRKCB-201ENST00000303531 OR56A4Q8NGH8 313 aa14.21□□□□□ -0.13
PRKCB-201ENST00000303531 LRRIQ1Q96JM4 1722 aa14.21□□□□□ -0.14
PRKCB-201ENST00000303531 DNAJB2P25686 324 aa14.21□□□□□ -0.14
PRKCB-201ENST00000303531 RAB27AP51159 221 aa14.21□□□□□ -0.14
PRKCB-201ENST00000303531 C15orf59Q2T9L4 293 aaPredicted RBP14.21□□□□□ -0.14
PRKCB-201ENST00000303531 NPNTQ6UXI9 565 aa14.21□□□□□ -0.14
PRKCB-201ENST00000303531 HAS1Q92839 578 aa14.21□□□□□ -0.14
PRKCB-201ENST00000303531 PREX1Q8TCU6 1659 aa14.21□□□□□ -0.14
PRKCB-201ENST00000303531 FAM20BO75063 409 aa14.2□□□□□ -0.14
PRKCB-201ENST00000303531 CYP1A2P05177 515 aa14.2□□□□□ -0.14
PRKCB-201ENST00000303531 ATP5BP06576 529 aaKnown RBP14.2□□□□□ -0.14
PRKCB-201ENST00000303531 ADRB2P07550 413 aa14.2□□□□□ -0.14
PRKCB-201ENST00000303531 EPHX2P34913 555 aa14.2□□□□□ -0.14
PRKCB-201ENST00000303531 FAM126BQ8IXS8 530 aa14.2□□□□□ -0.14
PRKCB-201ENST00000303531 RNF145Q96MT1 663 aa14.2□□□□□ -0.14
PRKCB-201ENST00000303531 KCNK4Q9NYG8 393 aa14.2□□□□□ -0.14
PRKCB-201ENST00000303531 DCDC2CA8MYV0 355 aa14.2□□□□□ -0.14
PRKCB-201ENST00000303531 WNT10BO00744 389 aa14.2□□□□□ -0.14
PRKCB-201ENST00000303531 ZNF410Q86VK4 478 aa14.2□□□□□ -0.14
PRKCB-201ENST00000303531 EID3Q8N140 333 aa14.2□□□□□ -0.14
PRKCB-201ENST00000303531 METTL6Q8TCB7 284 aa14.2□□□□□ -0.14
PRKCB-201ENST00000303531 SPPL2AQ8TCT8 520 aa14.2□□□□□ -0.14
PRKCB-201ENST00000303531 CKAP2Q8WWK9 683 aa14.2□□□□□ -0.14
PRKCB-201ENST00000303531 KLHL25Q9H0H3 589 aa14.2□□□□□ -0.14
PRKCB-201ENST00000303531 OSGEPL1Q9H4B0 414 aa14.2□□□□□ -0.14
PRKCB-201ENST00000303531 A1CFQ9NQ94 594 aaKnown RBP14.2□□□□□ -0.14
PRKCB-201ENST00000303531 STMN3Q9NZ72 180 aa14.2□□□□□ -0.14
PRKCB-201ENST00000303531 TRPC4Q9UBN4 977 aa14.2□□□□□ -0.14
PRKCB-201ENST00000303531 PDZK1P1A8MUH7 402 aa14.2□□□□□ -0.14
PRKCB-201ENST00000303531 CLOCKO15516 846 aa14.2□□□□□ -0.14
PRKCB-201ENST00000303531 SYNCRIPO60506 623 aaKnown RBP14.2□□□□□ -0.14
PRKCB-201ENST00000303531 SEC22BO75396 215 aa14.2□□□□□ -0.14
PRKCB-201ENST00000303531 LDLRP01130 860 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms