RNA–Protein interactions for RNA: ENST00000303407.11

BRD3-201, Transcript of bromodomain containing 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene BRD3, Length 5,652 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD3-201ENST00000303407 PDGFDQ9GZP0 370 aaPredicted RBP16.71■□□□□ 0.27
BRD3-201ENST00000303407 POMKQ9H5K3 350 aa16.71■□□□□ 0.27
BRD3-201ENST00000303407 FARP2O94887 1054 aaPredicted RBP16.71■□□□□ 0.27
BRD3-201ENST00000303407 ZNF23P17027 643 aa16.71■□□□□ 0.27
BRD3-201ENST00000303407 YWHAQP27348 245 aa16.71■□□□□ 0.27
BRD3-201ENST00000303407 JAM2P57087 298 aa16.71■□□□□ 0.27
BRD3-201ENST00000303407 ZCWPW2Q504Y3 356 aa16.71■□□□□ 0.27
BRD3-201ENST00000303407 ABHD15Q6UXT9 468 aa16.71■□□□□ 0.27
BRD3-201ENST00000303407 ZNF467Q7Z7K2 595 aaPredicted RBP16.71■□□□□ 0.27
BRD3-201ENST00000303407 VAT1Q99536 393 aa16.71■□□□□ 0.27
BRD3-201ENST00000303407 TINF2Q9BSI4 451 aa16.71■□□□□ 0.27
BRD3-201ENST00000303407 NRDE2Q9H7Z3 1164 aa16.71■□□□□ 0.27
BRD3-201ENST00000303407 IL1RAPL1Q9NZN1 696 aa16.71■□□□□ 0.27
BRD3-201ENST00000303407 ACTL7BQ9Y614 415 aa16.71■□□□□ 0.27
BRD3-201ENST00000303407 NPR3P17342 541 aa16.71■□□□□ 0.27
BRD3-201ENST00000303407 MTIF3Q9H2K0 278 aaKnown RBP16.71■□□□□ 0.27
BRD3-201ENST00000303407 SCN3BQ9NY72 215 aa16.71■□□□□ 0.27
BRD3-201ENST00000303407 NRXN3Q9Y4C0 1643 aa16.71■□□□□ 0.27
BRD3-201ENST00000303407 PSMC3P17980 439 aa16.71■□□□□ 0.26
BRD3-201ENST00000303407 ELF3P78545 371 aaPredicted RBP16.71■□□□□ 0.26
BRD3-201ENST00000303407 DDX39BQ13838 428 aaKnown RBP16.71■□□□□ 0.26
BRD3-201ENST00000303407 PSTKQ8IV42 348 aaKnown RBP16.71■□□□□ 0.26
BRD3-201ENST00000303407 OR52K1Q8NGK4 314 aa16.71■□□□□ 0.26
BRD3-201ENST00000303407 NKX2-3Q8TAU0 364 aa16.71■□□□□ 0.26
BRD3-201ENST00000303407 CDHR5Q9HBB8 845 aa16.71■□□□□ 0.26
BRD3-201ENST00000303407 SAR1AQ9NR31 198 aa16.71■□□□□ 0.26
BRD3-201ENST00000303407 CDK7P50613 346 aa16.7■□□□□ 0.26
BRD3-201ENST00000303407 FHDC1Q9C0D6 1143 aaPredicted RBP16.7■□□□□ 0.26
BRD3-201ENST00000303407 SPASTQ9UBP0 616 aa16.7■□□□□ 0.26
BRD3-201ENST00000303407 NALCNQ8IZF0 1738 aa16.7■□□□□ 0.26
BRD3-201ENST00000303407 SPEF2Q9C093 1822 aa16.7■□□□□ 0.26
BRD3-201ENST00000303407 DCDC2CA8MYV0 355 aa16.7■□□□□ 0.26
BRD3-201ENST00000303407 ARIH2O95376 493 aa16.7■□□□□ 0.26
BRD3-201ENST00000303407 HOXC6P09630 235 aa16.7■□□□□ 0.26
BRD3-201ENST00000303407 MAPK1P28482 360 aa16.7■□□□□ 0.26
BRD3-201ENST00000303407 ELAVL2Q12926 359 aaKnown RBP16.7■□□□□ 0.26
BRD3-201ENST00000303407 POLNQ7Z5Q5 900 aa16.7■□□□□ 0.26
BRD3-201ENST00000303407 POU5F2Q8N7G0 328 aa16.7■□□□□ 0.26
BRD3-201ENST00000303407 DIS3LQ8TF46 1054 aaKnown RBP16.7■□□□□ 0.26
BRD3-201ENST00000303407 BSNDQ8WZ55 320 aa16.7■□□□□ 0.26
BRD3-201ENST00000303407 NMRAL1Q9HBL8 299 aa16.7■□□□□ 0.26
BRD3-201ENST00000303407 PLIN4Q96Q06 1357 aa16.7■□□□□ 0.26
BRD3-201ENST00000303407 A0A087X1B8 175 aa16.7■□□□□ 0.26
BRD3-201ENST00000303407 SNX3O60493 162 aa16.7■□□□□ 0.26
BRD3-201ENST00000303407 ATP6AP1LQ52LC2 224 aa16.7■□□□□ 0.26
BRD3-201ENST00000303407 PRAMEF19Q5SWL8 479 aa16.7■□□□□ 0.26
BRD3-201ENST00000303407 LRRC8BQ6P9F7 803 aa16.7■□□□□ 0.26
BRD3-201ENST00000303407 LRRN4Q8WUT4 740 aa16.7■□□□□ 0.26
BRD3-201ENST00000303407 NEUROG2Q9H2A3 272 aa16.7■□□□□ 0.26
BRD3-201ENST00000303407 ENTPD7Q9NQZ7 604 aa16.7■□□□□ 0.26
BRD3-201ENST00000303407 ABCC13Q9NSE7 274 aa16.7■□□□□ 0.26
BRD3-201ENST00000303407 RAD54BQ9Y620 910 aa16.7■□□□□ 0.26
BRD3-201ENST00000303407 ERBB2P04626 1255 aa16.7■□□□□ 0.26
BRD3-201ENST00000303407 RANBP1P43487 201 aa16.7■□□□□ 0.26
BRD3-201ENST00000303407 SCNN1GP51170 649 aa16.7■□□□□ 0.26
BRD3-201ENST00000303407 SLC34A1Q06495 639 aa16.7■□□□□ 0.26
BRD3-201ENST00000303407 LGI2Q8N0V4 545 aa16.7■□□□□ 0.26
BRD3-201ENST00000303407 KCTD14Q9BQ13 255 aaPredicted RBP16.7■□□□□ 0.26
BRD3-201ENST00000303407 EMILIN2Q9BXX0 1053 aa16.7■□□□□ 0.26
BRD3-201ENST00000303407 KCNK4Q9NYG8 393 aa16.7■□□□□ 0.26
BRD3-201ENST00000303407 IGKV6D-41A0A0C4DH26 115 aa16.7■□□□□ 0.26
BRD3-201ENST00000303407 ATP5BP06576 529 aaKnown RBP16.7■□□□□ 0.26
BRD3-201ENST00000303407 PBLDP30039 288 aaPredicted RBP16.7■□□□□ 0.26
BRD3-201ENST00000303407 IRX1P78414 480 aaPredicted RBP16.7■□□□□ 0.26
BRD3-201ENST00000303407 OLFML2BQ68BL8 750 aa16.7■□□□□ 0.26
BRD3-201ENST00000303407 ZBTB10Q96DT7 871 aa16.7■□□□□ 0.26
BRD3-201ENST00000303407 OR12D3Q9UGF7 316 aa16.7■□□□□ 0.26
BRD3-201ENST00000303407 SRRM3A6NNA2 597 aaPredicted RBP16.69■□□□□ 0.26
BRD3-201ENST00000303407 SPTLC1O15269 473 aa16.69■□□□□ 0.26
BRD3-201ENST00000303407 BAIAP3O94812 1187 aa16.69■□□□□ 0.26
BRD3-201ENST00000303407 RTN3O95197 1032 aaPredicted RBP16.69■□□□□ 0.26
BRD3-201ENST00000303407 DEFB128Q7Z7B8 93 aa16.69■□□□□ 0.26
BRD3-201ENST00000303407 APLFQ8IW19 511 aaPredicted RBP16.69■□□□□ 0.26
BRD3-201ENST00000303407 PRCCQ92733 491 aaPredicted RBP16.69■□□□□ 0.26
BRD3-201ENST00000303407 COG5Q9UP83 839 aa16.69■□□□□ 0.26
BRD3-201ENST00000303407 C2CD2Q9Y426 696 aa16.69■□□□□ 0.26
BRD3-201ENST00000303407 MYPNQ86TC9 1320 aa16.69■□□□□ 0.26
BRD3-201ENST00000303407 ZNF135P52742 658 aaPredicted RBP16.69■□□□□ 0.26
BRD3-201ENST00000303407 NPY5RQ15761 445 aa16.69■□□□□ 0.26
BRD3-201ENST00000303407 CYP51A1Q16850 503 aa16.69■□□□□ 0.26
BRD3-201ENST00000303407 SH3BP5LQ7L8J4 393 aa16.69■□□□□ 0.26
BRD3-201ENST00000303407 C11orf96Q7Z7L8 435 aa16.69■□□□□ 0.26
BRD3-201ENST00000303407 B3GALNT2Q8NCR0 500 aa16.69■□□□□ 0.26
BRD3-201ENST00000303407 DTNBP1Q96EV8 351 aa16.69■□□□□ 0.26
BRD3-201ENST00000303407 TTYH3Q9C0H2 523 aa16.69■□□□□ 0.26
BRD3-201ENST00000303407 ATP13A1Q9HD20 1204 aa16.69■□□□□ 0.26
BRD3-201ENST00000303407 CCNG1P51959 295 aa16.69■□□□□ 0.26
BRD3-201ENST00000303407 EEF1DP3Q658K8 133 aa16.69■□□□□ 0.26
BRD3-201ENST00000303407 ZNF229Q9UJW7 825 aa16.69■□□□□ 0.26
BRD3-201ENST00000303407 NUDT5Q9UKK9 219 aa16.69■□□□□ 0.26
BRD3-201ENST00000303407 FAM95CA0A1B0GW59 222 aa16.69■□□□□ 0.26
BRD3-201ENST00000303407 TSHRP16473 764 aa16.69■□□□□ 0.26
BRD3-201ENST00000303407 HLA-DPA1P20036 260 aa16.69■□□□□ 0.26
BRD3-201ENST00000303407 DRD4P21917 467 aa16.69■□□□□ 0.26
BRD3-201ENST00000303407 YTHDF3Q7Z739 585 aaKnown RBP16.69■□□□□ 0.26
BRD3-201ENST00000303407 MIER2Q8N344 545 aa16.69■□□□□ 0.26
BRD3-201ENST00000303407 UTP6Q9NYH9 597 aaKnown RBP16.69■□□□□ 0.26
BRD3-201ENST00000303407 MTA1Q13330 715 aa16.68■□□□□ 0.26
BRD3-201ENST00000303407 RNF43Q68DV7 783 aa16.68■□□□□ 0.26
BRD3-201ENST00000303407 BBS12Q6ZW61 710 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms