RNA–Protein interactions for RNA: ENST00000302536.2

VAT1L-201, Transcript of vesicle amine transport 1 like, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAT1L, Length 3,825 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1L-201ENST00000302536 FAAP100Q0VG06 881 aa13.19□□□□□ -0.3
VAT1L-201ENST00000302536 STX3Q13277 289 aa13.19□□□□□ -0.3
VAT1L-201ENST00000302536 SLC12A1Q13621 1099 aa13.19□□□□□ -0.3
VAT1L-201ENST00000302536 PIGHQ14442 188 aaPredicted RBP13.19□□□□□ -0.3
VAT1L-201ENST00000302536 FBXO47Q5MNV8 452 aa13.19□□□□□ -0.3
VAT1L-201ENST00000302536 WSCD1Q658N2 575 aa13.19□□□□□ -0.3
VAT1L-201ENST00000302536 ATG16L1Q676U5 607 aa13.19□□□□□ -0.3
VAT1L-201ENST00000302536 RCOR2Q8IZ40 523 aa13.19□□□□□ -0.3
VAT1L-201ENST00000302536 EXT2Q93063 718 aa13.19□□□□□ -0.3
VAT1L-201ENST00000302536 AGAP3Q96P47 875 aa13.19□□□□□ -0.3
VAT1L-201ENST00000302536 RHOBTB2Q9BYZ6 727 aa13.19□□□□□ -0.3
VAT1L-201ENST00000302536 WWP1Q9H0M0 922 aa13.19□□□□□ -0.3
VAT1L-201ENST00000302536 ASB7Q9H672 318 aa13.19□□□□□ -0.3
VAT1L-201ENST00000302536 TRIM43BA6NCK2 446 aa13.19□□□□□ -0.3
VAT1L-201ENST00000302536 NUDT2P50583 147 aa13.19□□□□□ -0.3
VAT1L-201ENST00000302536 ARPP19P56211 112 aa13.19□□□□□ -0.3
VAT1L-201ENST00000302536 CACNB2Q08289 660 aaPredicted RBP13.19□□□□□ -0.3
VAT1L-201ENST00000302536 PPIDQ08752 370 aaKnown RBP13.19□□□□□ -0.3
VAT1L-201ENST00000302536 DCAF6Q58WW2 860 aa13.19□□□□□ -0.3
VAT1L-201ENST00000302536 TFDP3Q5H9I0 405 aa13.19□□□□□ -0.3
VAT1L-201ENST00000302536 RGMBQ6NW40 437 aa13.19□□□□□ -0.3
VAT1L-201ENST00000302536 ARRDC4Q8NCT1 418 aa13.19□□□□□ -0.3
VAT1L-201ENST00000302536 EXD1Q8NHP7 514 aa13.19□□□□□ -0.3
VAT1L-201ENST00000302536 CATSPER2Q96P56 530 aa13.19□□□□□ -0.3
VAT1L-201ENST00000302536 ZFYVE28Q9HCC9 887 aa13.19□□□□□ -0.3
VAT1L-201ENST00000302536 PCYOX1Q9UHG3 505 aa13.19□□□□□ -0.3
VAT1L-201ENST00000302536 RNF103-CHMP3A0A140T963 221 aa13.18□□□□□ -0.3
VAT1L-201ENST00000302536 PSTPIP1O43586 416 aa13.18□□□□□ -0.3
VAT1L-201ENST00000302536 ZBED1O96006 694 aa13.18□□□□□ -0.3
VAT1L-201ENST00000302536 PMLP29590 882 aa13.18□□□□□ -0.3
VAT1L-201ENST00000302536 CDK7P50613 346 aa13.18□□□□□ -0.3
VAT1L-201ENST00000302536 GEMIN4P57678 1058 aaKnown RBP13.18□□□□□ -0.3
VAT1L-201ENST00000302536 ESRRGP62508 458 aa13.18□□□□□ -0.3
VAT1L-201ENST00000302536 TTC30AQ86WT1 665 aa13.18□□□□□ -0.3
VAT1L-201ENST00000302536 APPL2Q8NEU8 664 aa13.18□□□□□ -0.3
VAT1L-201ENST00000302536 SREK1Q8WXA9 508 aaKnown RBP13.18□□□□□ -0.3
VAT1L-201ENST00000302536 OXNAD1Q96HP4 312 aaPredicted RBP13.18□□□□□ -0.3
VAT1L-201ENST00000302536 PAAF1Q9BRP4 392 aa13.18□□□□□ -0.3
VAT1L-201ENST00000302536 KATNBL1Q9H079 304 aa13.18□□□□□ -0.3
VAT1L-201ENST00000302536 TAS2R1Q9NYW7 299 aa13.18□□□□□ -0.3
VAT1L-201ENST00000302536 GJD2Q9UKL4 321 aa13.18□□□□□ -0.3
VAT1L-201ENST00000302536 CDY2AQ9Y6F7 541 aa13.18□□□□□ -0.3
VAT1L-201ENST00000302536 RRN3P2A6NIE6 340 aa13.18□□□□□ -0.3
VAT1L-201ENST00000302536 MTA2O94776 668 aa13.18□□□□□ -0.3
VAT1L-201ENST00000302536 VDRP11473 427 aa13.18□□□□□ -0.3
VAT1L-201ENST00000302536 RGS2P41220 211 aa13.18□□□□□ -0.3
VAT1L-201ENST00000302536 TMED10P49755 219 aaKnown RBP13.18□□□□□ -0.3
VAT1L-201ENST00000302536 NDUFV1P49821 464 aa13.18□□□□□ -0.3
VAT1L-201ENST00000302536 SCNN1GP51170 649 aa13.18□□□□□ -0.3
VAT1L-201ENST00000302536 CCNG1P51959 295 aa13.18□□□□□ -0.3
VAT1L-201ENST00000302536 HADHBP55084 474 aaKnown RBP13.18□□□□□ -0.3
VAT1L-201ENST00000302536 RNF135Q8IUD6 432 aa13.18□□□□□ -0.3
VAT1L-201ENST00000302536 UNC45BQ8IWX7 931 aa13.18□□□□□ -0.3
VAT1L-201ENST00000302536 GABPB2Q8TAK5 448 aaPredicted RBP13.18□□□□□ -0.3
VAT1L-201ENST00000302536 SGF29Q96ES7 293 aa13.18□□□□□ -0.3
VAT1L-201ENST00000302536 TUBB6Q9BUF5 446 aa13.18□□□□□ -0.3
VAT1L-201ENST00000302536 CCDC134Q9H6E4 229 aa13.18□□□□□ -0.3
VAT1L-201ENST00000302536 SPC25Q9HBM1 224 aa13.18□□□□□ -0.3
VAT1L-201ENST00000302536 IPPQ9Y573 584 aa13.18□□□□□ -0.3
VAT1L-201ENST00000302536 NRCAMQ92823 1304 aa13.18□□□□□ -0.3
VAT1L-201ENST00000302536 KPNA7A9QM74 516 aa13.18□□□□□ -0.3
VAT1L-201ENST00000302536 FOXD2O60548 495 aaPredicted RBP13.18□□□□□ -0.3
VAT1L-201ENST00000302536 GPD1P21695 349 aa13.18□□□□□ -0.3
VAT1L-201ENST00000302536 GPD2P43304 727 aa13.18□□□□□ -0.3
VAT1L-201ENST00000302536 ZNF132P52740 706 aa13.18□□□□□ -0.3
VAT1L-201ENST00000302536 MAP3K7CLP57077 242 aa13.18□□□□□ -0.3
VAT1L-201ENST00000302536 CA9Q16790 459 aa13.18□□□□□ -0.3
VAT1L-201ENST00000302536 ARFGAP1Q8N6T3 406 aa13.18□□□□□ -0.3
VAT1L-201ENST00000302536 RBM15BQ8NDT2 890 aaKnown RBP13.18□□□□□ -0.3
VAT1L-201ENST00000302536 RNF34Q969K3 372 aa13.18□□□□□ -0.3
VAT1L-201ENST00000302536 MARK4Q96L34 752 aa13.18□□□□□ -0.3
VAT1L-201ENST00000302536 PAIP1Q9H074 479 aaKnown RBP13.18□□□□□ -0.3
VAT1L-201ENST00000302536 C20orf96Q9NUD7 363 aaPredicted RBP13.18□□□□□ -0.3
VAT1L-201ENST00000302536 LAMA3Q16787 3333 aa13.18□□□□□ -0.3
VAT1L-201ENST00000302536 PRR5-ARHGAP8B1AHC4 643 aa13.17□□□□□ -0.3
VAT1L-201ENST00000302536 DCXO43602 365 aa13.17□□□□□ -0.3
VAT1L-201ENST00000302536 EDF1O60869 148 aaKnown RBP13.17□□□□□ -0.3
VAT1L-201ENST00000302536 AOC2O75106 756 aa13.17□□□□□ -0.3
VAT1L-201ENST00000302536 FGFR1P11362 822 aa13.17□□□□□ -0.3
VAT1L-201ENST00000302536 CPT1AP50416 773 aa13.17□□□□□ -0.3
VAT1L-201ENST00000302536 ARHGAP8P85298 464 aa13.17□□□□□ -0.3
VAT1L-201ENST00000302536 OCRLQ01968 901 aa13.17□□□□□ -0.3
VAT1L-201ENST00000302536 SFSWAPQ12872 951 aaKnown RBP13.17□□□□□ -0.3
VAT1L-201ENST00000302536 SOWAHAQ2M3V2 549 aa13.17□□□□□ -0.3
VAT1L-201ENST00000302536 KDELC2Q7Z4H8 507 aa13.17□□□□□ -0.3
VAT1L-201ENST00000302536 PYROXD2Q8N2H3 581 aa13.17□□□□□ -0.3
VAT1L-201ENST00000302536 DNAAF3Q8N9W5 541 aa13.17□□□□□ -0.3
VAT1L-201ENST00000302536 EDEM1Q92611 657 aa13.17□□□□□ -0.3
VAT1L-201ENST00000302536 LRRC19Q9H756 370 aa13.17□□□□□ -0.3
VAT1L-201ENST00000302536 LRRC4Q9HBW1 653 aa13.17□□□□□ -0.3
VAT1L-201ENST00000302536 KRT82Q9NSB4 513 aa13.17□□□□□ -0.3
VAT1L-201ENST00000302536 ASNSD1Q9NWL6 643 aa13.17□□□□□ -0.3
VAT1L-201ENST00000302536 MORF4L1Q9UBU8 362 aa13.17□□□□□ -0.3
VAT1L-201ENST00000302536 PPM1HQ9ULR3 514 aa13.17□□□□□ -0.3
VAT1L-201ENST00000302536 DNAJC16Q9Y2G8 782 aa13.17□□□□□ -0.3
VAT1L-201ENST00000302536 STARD13Q9Y3M8 1113 aa13.17□□□□□ -0.3
VAT1L-201ENST00000302536 KCNN4O15554 427 aa13.17□□□□□ -0.3
VAT1L-201ENST00000302536 LYPLA1O75608 230 aaPredicted RBP13.17□□□□□ -0.3
VAT1L-201ENST00000302536 F7P08709 466 aaPredicted RBP13.17□□□□□ -0.3
VAT1L-201ENST00000302536 HTRA3P83110 453 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms