RNA–Protein interactions for RNA: ENST00000302273.2

VPREB1-201, Transcript of V-set pre-B cell surrogate light chain 1, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene VPREB1, Length 626 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPREB1-201ENST00000302273 SPOPO43791 374 aa9.12□□□□□ -0.95
VPREB1-201ENST00000302273 ATG13O75143 517 aa9.12□□□□□ -0.95
VPREB1-201ENST00000302273 ZNF189O75820 626 aaPredicted RBP9.12□□□□□ -0.95
VPREB1-201ENST00000302273 LUC7L3O95232 432 aaKnown RBP9.12□□□□□ -0.95
VPREB1-201ENST00000302273 MOCS3O95396 460 aa9.12□□□□□ -0.95
VPREB1-201ENST00000302273 GJB6O95452 261 aa9.12□□□□□ -0.95
VPREB1-201ENST00000302273 MOCS2O96007 188 aaPredicted RBP9.12□□□□□ -0.95
VPREB1-201ENST00000302273 RARAP10276 462 aa9.12□□□□□ -0.95
VPREB1-201ENST00000302273 TNNT1P13805 278 aa9.12□□□□□ -0.95
VPREB1-201ENST00000302273 ARSAP15289 507 aa9.12□□□□□ -0.95
VPREB1-201ENST00000302273 COMTP21964 271 aa9.12□□□□□ -0.95
VPREB1-201ENST00000302273 SLC6A4P31645 630 aa9.12□□□□□ -0.95
VPREB1-201ENST00000302273 ARL4AP40617 200 aa9.12□□□□□ -0.95
VPREB1-201ENST00000302273 CETN2P41208 172 aa9.12□□□□□ -0.95
VPREB1-201ENST00000302273 RPS9P46781 194 aaKnown RBP9.12□□□□□ -0.95
VPREB1-201ENST00000302273 DGKGP49619 791 aa9.12□□□□□ -0.95
VPREB1-201ENST00000302273 CLCN5P51795 746 aa9.12□□□□□ -0.95
VPREB1-201ENST00000302273 SULT2A1Q06520 285 aa9.12□□□□□ -0.95
VPREB1-201ENST00000302273 TNK2Q07912 1038 aa9.12□□□□□ -0.95
VPREB1-201ENST00000302273 SLC20A2Q08357 652 aa9.12□□□□□ -0.95
VPREB1-201ENST00000302273 LRRC32Q14392 662 aa9.12□□□□□ -0.95
VPREB1-201ENST00000302273 TMEM196Q5HYL7 178 aa9.12□□□□□ -0.95
VPREB1-201ENST00000302273 RAP1GAP2Q684P5 730 aa9.12□□□□□ -0.95
VPREB1-201ENST00000302273 TRIM68Q6AZZ1 485 aa9.12□□□□□ -0.95
VPREB1-201ENST00000302273 NYAP1Q6ZVC0 841 aa9.12□□□□□ -0.95
VPREB1-201ENST00000302273 CYP4V2Q6ZWL3 525 aaPredicted RBP9.12□□□□□ -0.95
VPREB1-201ENST00000302273 METTL3Q86U44 580 aaKnown RBP9.12□□□□□ -0.95
VPREB1-201ENST00000302273 DNAAF5Q86Y56 855 aa9.12□□□□□ -0.95
VPREB1-201ENST00000302273 RCOR2Q8IZ40 523 aa9.12□□□□□ -0.95
VPREB1-201ENST00000302273 LGI2Q8N0V4 545 aa9.12□□□□□ -0.95
VPREB1-201ENST00000302273 AHI1Q8N157 1196 aa9.12□□□□□ -0.95
VPREB1-201ENST00000302273 CCDC185Q8N715 623 aa9.12□□□□□ -0.95
VPREB1-201ENST00000302273 LRRC57Q8N9N7 239 aa9.12□□□□□ -0.95
VPREB1-201ENST00000302273 CD101Q93033 1021 aa9.12□□□□□ -0.95
VPREB1-201ENST00000302273 WBP2Q969T9 261 aa9.12□□□□□ -0.95
VPREB1-201ENST00000302273 ACDQ96AP0 544 aa9.12□□□□□ -0.95
VPREB1-201ENST00000302273 TBC1D31Q96DN5 1066 aa9.12□□□□□ -0.95
VPREB1-201ENST00000302273 ZFYVE19Q96K21 471 aa9.12□□□□□ -0.95
VPREB1-201ENST00000302273 ZNF670Q9BS34 389 aa9.12□□□□□ -0.95
VPREB1-201ENST00000302273 TRIM7Q9C029 511 aa9.12□□□□□ -0.95
VPREB1-201ENST00000302273 SIK2Q9H0K1 926 aa9.12□□□□□ -0.95
VPREB1-201ENST00000302273 TMEM248Q9NWD8 314 aa9.12□□□□□ -0.95
VPREB1-201ENST00000302273 COX16Q9P0S2 106 aa9.12□□□□□ -0.95
VPREB1-201ENST00000302273 AP4E1Q9UPM8 1137 aa9.12□□□□□ -0.95
VPREB1-201ENST00000302273 RAD54BQ9Y620 910 aa9.12□□□□□ -0.95
VPREB1-201ENST00000302273 ILVBLA1L0T0 632 aa9.11□□□□□ -0.95
VPREB1-201ENST00000302273 USP27XA6NNY8 438 aa9.11□□□□□ -0.95
VPREB1-201ENST00000302273 NEDD8-MDP1E9PL57 170 aa9.11□□□□□ -0.95
VPREB1-201ENST00000302273 H0Y626 953 aa9.11□□□□□ -0.95
VPREB1-201ENST00000302273 H3BRJ5 948 aa9.11□□□□□ -0.95
VPREB1-201ENST00000302273 I6L893 689 aaPredicted RBP9.11□□□□□ -0.95
VPREB1-201ENST00000302273 KIF2AO00139 706 aaPredicted RBP9.11□□□□□ -0.95
VPREB1-201ENST00000302273 NARSO43776 548 aaKnown RBP9.11□□□□□ -0.95
VPREB1-201ENST00000302273 TULP3O75386 442 aa9.11□□□□□ -0.95
VPREB1-201ENST00000302273 LRIG2O94898 1065 aa9.11□□□□□ -0.95
VPREB1-201ENST00000302273 ZRANB2O95218 330 aaKnown RBP eCLIP9.11□□□□□ -0.95
VPREB1-201ENST00000302273 TUBB4AP04350 444 aa9.11□□□□□ -0.95
VPREB1-201ENST00000302273 ASLP04424 464 aa9.11□□□□□ -0.95
VPREB1-201ENST00000302273 APODP05090 189 aa9.11□□□□□ -0.95
VPREB1-201ENST00000302273 ATP5BP06576 529 aaKnown RBP9.11□□□□□ -0.95
VPREB1-201ENST00000302273 CISD3P0C7P0 127 aa9.11□□□□□ -0.95
VPREB1-201ENST00000302273 ZFXP17010 805 aaPredicted RBP9.11□□□□□ -0.95
VPREB1-201ENST00000302273 HOXD9P28356 352 aaPredicted RBP9.11□□□□□ -0.95
VPREB1-201ENST00000302273 EPHB2P29323 1055 aa9.11□□□□□ -0.95
VPREB1-201ENST00000302273 CTNNA1P35221 906 aaKnown RBP9.11□□□□□ -0.95
VPREB1-201ENST00000302273 GALK1P51570 392 aa9.11□□□□□ -0.95
VPREB1-201ENST00000302273 ARSEP51690 589 aa9.11□□□□□ -0.95
VPREB1-201ENST00000302273 NDST2P52849 883 aa9.11□□□□□ -0.95
VPREB1-201ENST00000302273 ATXN1P54253 815 aaKnown RBP9.11□□□□□ -0.95
VPREB1-201ENST00000302273 GEMIN4P57678 1058 aaKnown RBP9.11□□□□□ -0.95
VPREB1-201ENST00000302273 MRPS21P82921 87 aaKnown RBP9.11□□□□□ -0.95
VPREB1-201ENST00000302273 CDH18Q13634 790 aa9.11□□□□□ -0.95
VPREB1-201ENST00000302273 GAB4Q2WGN9 574 aa9.11□□□□□ -0.95
VPREB1-201ENST00000302273 ODF2Q5BJF6 829 aa9.11□□□□□ -0.95
VPREB1-201ENST00000302273 TMCO4Q5TGY1 634 aa9.11□□□□□ -0.95
VPREB1-201ENST00000302273 GRAMD4Q6IC98 578 aa9.11□□□□□ -0.95
VPREB1-201ENST00000302273 TPGS1Q6ZTW0 290 aa9.11□□□□□ -0.95
VPREB1-201ENST00000302273 RFX8Q6ZV50 586 aa9.11□□□□□ -0.95
VPREB1-201ENST00000302273 BZW1Q7L1Q6 419 aaKnown RBP9.11□□□□□ -0.95
VPREB1-201ENST00000302273 TRMT11Q7Z4G4 463 aaKnown RBP9.11□□□□□ -0.95
VPREB1-201ENST00000302273 MFN1Q8IWA4 741 aa9.11□□□□□ -0.95
VPREB1-201ENST00000302273 KATNAL2Q8IYT4 538 aa9.11□□□□□ -0.95
VPREB1-201ENST00000302273 UMODL1-AS1Q8N2C9 162 aa9.11□□□□□ -0.95
VPREB1-201ENST00000302273 UBL4BQ8N7F7 174 aa9.11□□□□□ -0.95
VPREB1-201ENST00000302273 RTL3Q8N8U3 475 aaKnown RBP9.11□□□□□ -0.95
VPREB1-201ENST00000302273 KCTD6Q8NC69 237 aa9.11□□□□□ -0.95
VPREB1-201ENST00000302273 TTC16Q8NEE8 873 aa9.11□□□□□ -0.95
VPREB1-201ENST00000302273 EXD1Q8NHP7 514 aa9.11□□□□□ -0.95
VPREB1-201ENST00000302273 UCMAQ8WVF2 138 aa9.11□□□□□ -0.95
VPREB1-201ENST00000302273 CLDN23Q96B33 292 aa9.11□□□□□ -0.95
VPREB1-201ENST00000302273 C16orf45Q96MC5 204 aaPredicted RBP9.11□□□□□ -0.95
VPREB1-201ENST00000302273 DESI2Q9BSY9 194 aa9.11□□□□□ -0.95
VPREB1-201ENST00000302273 SNRNP25Q9BV90 132 aaKnown RBP9.11□□□□□ -0.95
VPREB1-201ENST00000302273 C1QTNF1Q9BXJ1 281 aa9.11□□□□□ -0.95
VPREB1-201ENST00000302273 MAGEH1Q9H213 219 aa9.11□□□□□ -0.95
VPREB1-201ENST00000302273 ANLNQ9NQW6 1124 aa9.11□□□□□ -0.95
VPREB1-201ENST00000302273 HEBP1Q9NRV9 189 aa9.11□□□□□ -0.95
VPREB1-201ENST00000302273 PCSK1NQ9UHG2 260 aa9.11□□□□□ -0.95
VPREB1-201ENST00000302273 XPO7Q9UIA9 1087 aaKnown RBP9.11□□□□□ -0.95
VPREB1-201ENST00000302273 AMFRQ9UKV5 643 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms