RNA–Protein interactions for RNA: ENST00000302206.9

TPM3-202, Transcript of tropomyosin 3, humanhuman

TSL 3 BASIC

Gene TPM3, Length 741 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-202ENST00000302206 GPR15P49685 360 aa12.35□□□□□ -0.43
TPM3-202ENST00000302206 KPNA1P52294 538 aaPredicted RBP12.35□□□□□ -0.43
TPM3-202ENST00000302206 USP46P62068 366 aa12.35□□□□□ -0.43
TPM3-202ENST00000302206 SARNPP82979 210 aaKnown RBP12.35□□□□□ -0.43
TPM3-202ENST00000302206 PPIDQ08752 370 aaKnown RBP12.35□□□□□ -0.43
TPM3-202ENST00000302206 IFRD2Q12894 506 aaPredicted RBP12.35□□□□□ -0.43
TPM3-202ENST00000302206 NR1H3Q13133 447 aa12.35□□□□□ -0.43
TPM3-202ENST00000302206 TRIP4Q15650 581 aaPredicted RBP12.35□□□□□ -0.43
TPM3-202ENST00000302206 PSMD5Q16401 504 aa12.35□□□□□ -0.43
TPM3-202ENST00000302206 PARP6Q2NL67 630 aa12.35□□□□□ -0.43
TPM3-202ENST00000302206 DNAJC21Q5F1R6 531 aaKnown RBP12.35□□□□□ -0.43
TPM3-202ENST00000302206 ANKRD20A2Q5SQ80 823 aa12.35□□□□□ -0.43
TPM3-202ENST00000302206 ANKRD20A1Q5TYW2 823 aa12.35□□□□□ -0.43
TPM3-202ENST00000302206 ANKRD20A3Q5VUR7 823 aa12.35□□□□□ -0.43
TPM3-202ENST00000302206 TPGS2Q68CL5 300 aa12.35□□□□□ -0.43
TPM3-202ENST00000302206 TAOK1Q7L7X3 1001 aa12.35□□□□□ -0.43
TPM3-202ENST00000302206 HOMEZQ8IX15 550 aa12.35□□□□□ -0.43
TPM3-202ENST00000302206 SLC39A11Q8N1S5 342 aa12.35□□□□□ -0.43
TPM3-202ENST00000302206 TMEM199Q8N511 208 aa12.35□□□□□ -0.43
TPM3-202ENST00000302206 UHMK1Q8TAS1 419 aaKnown RBP12.35□□□□□ -0.43
TPM3-202ENST00000302206 CCDC110Q8TBZ0 833 aa12.35□□□□□ -0.43
TPM3-202ENST00000302206 EPS8L3Q8TE67 593 aaKnown RBP12.35□□□□□ -0.43
TPM3-202ENST00000302206 PYROXD1Q8WU10 500 aa12.35□□□□□ -0.43
TPM3-202ENST00000302206 BADQ92934 168 aa12.35□□□□□ -0.43
TPM3-202ENST00000302206 FBXO32Q969P5 355 aa12.35□□□□□ -0.43
TPM3-202ENST00000302206 P2RY11Q96G91 374 aa12.35□□□□□ -0.43
TPM3-202ENST00000302206 PGLYRP2Q96PD5 576 aa12.35□□□□□ -0.43
TPM3-202ENST00000302206 CDK5RAP1Q96SZ6 601 aaKnown RBP12.35□□□□□ -0.43
TPM3-202ENST00000302206 VAT1Q99536 393 aa12.35□□□□□ -0.43
TPM3-202ENST00000302206 PRDM12Q9H4Q4 367 aa12.35□□□□□ -0.43
TPM3-202ENST00000302206 CATSPERBQ9H7T0 1116 aa12.35□□□□□ -0.43
TPM3-202ENST00000302206 ETNK1Q9HBU6 452 aa12.35□□□□□ -0.43
TPM3-202ENST00000302206 XAB2Q9HCS7 855 aaKnown RBP12.35□□□□□ -0.43
TPM3-202ENST00000302206 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.35□□□□□ -0.43
TPM3-202ENST00000302206 OSER1Q9NX31 292 aa12.35□□□□□ -0.43
TPM3-202ENST00000302206 EURLQ9NYK6 297 aa12.35□□□□□ -0.43
TPM3-202ENST00000302206 GMIPQ9P107 970 aa12.35□□□□□ -0.43
TPM3-202ENST00000302206 IGSF9Q9P2J2 1179 aa12.35□□□□□ -0.43
TPM3-202ENST00000302206 AFF4Q9UHB7 1163 aaKnown RBP12.35□□□□□ -0.43
TPM3-202ENST00000302206 SLC24A2Q9UI40 661 aa12.35□□□□□ -0.43
TPM3-202ENST00000302206 MAFFQ9ULX9 164 aa12.35□□□□□ -0.43
TPM3-202ENST00000302206 NEU3Q9UQ49 428 aa12.35□□□□□ -0.43
TPM3-202ENST00000302206 SLC38A8A6NNN8 435 aa12.34□□□□□ -0.43
TPM3-202ENST00000302206 WASH4PA8MWX3 477 aa12.34□□□□□ -0.43
TPM3-202ENST00000302206 GOLGA8MH3BSY2 632 aa12.34□□□□□ -0.43
TPM3-202ENST00000302206 RNF103O00237 685 aa12.34□□□□□ -0.43
TPM3-202ENST00000302206 MAP3K6O95382 1288 aa12.34□□□□□ -0.43
TPM3-202ENST00000302206 MLNP12872 115 aa12.34□□□□□ -0.43
TPM3-202ENST00000302206 EPHB2P29323 1055 aa12.34□□□□□ -0.43
TPM3-202ENST00000302206 PBX3P40426 434 aa12.34□□□□□ -0.43
TPM3-202ENST00000302206 MDH1P40925 334 aaKnown RBP12.34□□□□□ -0.43
TPM3-202ENST00000302206 MMP13P45452 471 aa12.34□□□□□ -0.43
TPM3-202ENST00000302206 PGFP49763 221 aa12.34□□□□□ -0.43
TPM3-202ENST00000302206 IRAK1P51617 712 aa12.34□□□□□ -0.43
TPM3-202ENST00000302206 NRLP54845 237 aa12.34□□□□□ -0.43
TPM3-202ENST00000302206 MLLT6P55198 1093 aaPredicted RBP12.34□□□□□ -0.43
TPM3-202ENST00000302206 ARPP19P56211 112 aa12.34□□□□□ -0.43
TPM3-202ENST00000302206 TBX4P57082 545 aa12.34□□□□□ -0.43
TPM3-202ENST00000302206 DSG1Q02413 1049 aa12.34□□□□□ -0.43
TPM3-202ENST00000302206 RING1Q06587 406 aa12.34□□□□□ -0.43
TPM3-202ENST00000302206 AP1B1Q10567 949 aa12.34□□□□□ -0.43
TPM3-202ENST00000302206 WASHC5Q12768 1159 aa12.34□□□□□ -0.43
TPM3-202ENST00000302206 FASTKD3Q14CZ7 662 aaKnown RBP12.34□□□□□ -0.43
TPM3-202ENST00000302206 LONRF1Q17RB8 773 aa12.34□□□□□ -0.43
TPM3-202ENST00000302206 MGAT5BQ3V5L5 792 aa12.34□□□□□ -0.43
TPM3-202ENST00000302206 MSS51Q4VC12 460 aa12.34□□□□□ -0.43
TPM3-202ENST00000302206 SDHAF4Q5VUM1 108 aa12.34□□□□□ -0.43
TPM3-202ENST00000302206 PRSS55Q6UWB4 352 aaPredicted RBP12.34□□□□□ -0.43
TPM3-202ENST00000302206 B4GALNT4Q76KP1 1039 aa12.34□□□□□ -0.43
TPM3-202ENST00000302206 LRRC49Q8IUZ0 686 aa12.34□□□□□ -0.43
TPM3-202ENST00000302206 CCDC13Q8IYE1 715 aa12.34□□□□□ -0.43
TPM3-202ENST00000302206 TTC9BQ8N6N2 239 aa12.34□□□□□ -0.43
TPM3-202ENST00000302206 FBXO36Q8NEA4 188 aa12.34□□□□□ -0.43
TPM3-202ENST00000302206 PDZD8Q8NEN9 1154 aa12.34□□□□□ -0.43
TPM3-202ENST00000302206 CENPTQ96BT3 561 aa12.34□□□□□ -0.43
TPM3-202ENST00000302206 TBC1D31Q96DN5 1066 aa12.34□□□□□ -0.43
TPM3-202ENST00000302206 FCRL2Q96LA5 508 aaPredicted RBP12.34□□□□□ -0.43
TPM3-202ENST00000302206 TSGA13Q96PP4 275 aa12.34□□□□□ -0.43
TPM3-202ENST00000302206 LGMNQ99538 433 aa12.34□□□□□ -0.43
TPM3-202ENST00000302206 SEPT5Q99719 369 aaPredicted RBP12.34□□□□□ -0.43
TPM3-202ENST00000302206 VN1R3Q9BXE9 311 aa12.34□□□□□ -0.43
TPM3-202ENST00000302206 CRISPLD1Q9H336 500 aa12.34□□□□□ -0.43
TPM3-202ENST00000302206 DONSONQ9NYP3 566 aa12.34□□□□□ -0.43
TPM3-202ENST00000302206 SFMBT1Q9UHJ3 866 aa12.34□□□□□ -0.43
TPM3-202ENST00000302206 SLC12A6Q9UHW9 1150 aa12.34□□□□□ -0.43
TPM3-202ENST00000302206 TRHDEQ9UKU6 1024 aa12.34□□□□□ -0.43
TPM3-202ENST00000302206 ACTL7BQ9Y614 415 aa12.34□□□□□ -0.43
TPM3-202ENST00000302206 CDY1Q9Y6F8 540 aa12.34□□□□□ -0.43
TPM3-202ENST00000302206 TEX264Q9Y6I9 313 aa12.34□□□□□ -0.43
TPM3-202ENST00000302206 NCOR1O75376 2440 aa12.34□□□□□ -0.43
TPM3-202ENST00000302206 CLUHO75153 1309 aa12.34□□□□□ -0.43
TPM3-202ENST00000302206 GREB1Q4ZG55 1949 aa12.33□□□□□ -0.44
TPM3-202ENST00000302206 EXOC1LA0A1B0GW35 172 aa12.33□□□□□ -0.44
TPM3-202ENST00000302206 WDR27A2RRH5 827 aa12.33□□□□□ -0.44
TPM3-202ENST00000302206 TRIM43BA6NCK2 446 aa12.33□□□□□ -0.44
TPM3-202ENST00000302206 ABLIM3O94929 683 aa12.33□□□□□ -0.44
TPM3-202ENST00000302206 METTL18O95568 372 aa12.33□□□□□ -0.44
TPM3-202ENST00000302206 IGLV3-27P01718 113 aa12.33□□□□□ -0.44
TPM3-202ENST00000302206 APOEP02649 317 aa12.33□□□□□ -0.44
TPM3-202ENST00000302206 GARSP41250 739 aaKnown RBP12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms