RNA–Protein interactions for RNA: ENST00000302190.8

SDC2-201, Transcript of syndecan 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDC2, Length 3,759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-201ENST00000302190 TMEM63BQ5T3F8 832 aa14.4□□□□□ -0.1
SDC2-201ENST00000302190 CYP2R1Q6VVX0 501 aa14.4□□□□□ -0.1
SDC2-201ENST00000302190 BANPQ8N9N5 519 aa14.4□□□□□ -0.1
SDC2-201ENST00000302190 SNX31Q8N9S9 440 aa14.4□□□□□ -0.1
SDC2-201ENST00000302190 DTNBP1Q96EV8 351 aa14.4□□□□□ -0.1
SDC2-201ENST00000302190 CDRT15Q96T59 188 aa14.4□□□□□ -0.1
SDC2-201ENST00000302190 ILKAPQ9H0C8 392 aaPredicted RBP14.4□□□□□ -0.1
SDC2-201ENST00000302190 CCDC134Q9H6E4 229 aa14.4□□□□□ -0.1
SDC2-201ENST00000302190 TMEM134Q9H6X4 195 aa14.4□□□□□ -0.1
SDC2-201ENST00000302190 RHBDL2Q9NX52 303 aa14.4□□□□□ -0.1
SDC2-201ENST00000302190 DTNAQ9Y4J8 743 aa14.4□□□□□ -0.1
SDC2-201ENST00000302190 SPTLC1O15269 473 aa14.39□□□□□ -0.11
SDC2-201ENST00000302190 TKTL1P51854 596 aa14.39□□□□□ -0.11
SDC2-201ENST00000302190 HUNKP57058 714 aa14.39□□□□□ -0.11
SDC2-201ENST00000302190 NOMO1Q15155 1222 aa14.39□□□□□ -0.11
SDC2-201ENST00000302190 MTHFD1LQ6UB35 978 aa14.39□□□□□ -0.11
SDC2-201ENST00000302190 HPS6Q86YV9 775 aa14.39□□□□□ -0.11
SDC2-201ENST00000302190 GDPD5Q8WTR4 605 aa14.39□□□□□ -0.11
SDC2-201ENST00000302190 VPS39Q96JC1 886 aa14.39□□□□□ -0.11
SDC2-201ENST00000302190 TBCBQ99426 244 aa14.39□□□□□ -0.11
SDC2-201ENST00000302190 STRA6Q9BX79 667 aa14.39□□□□□ -0.11
SDC2-201ENST00000302190 AP5M1Q9H0R1 490 aa14.39□□□□□ -0.11
SDC2-201ENST00000302190 SEMA6AQ9H2E6 1030 aa14.39□□□□□ -0.11
SDC2-201ENST00000302190 CAAP1Q9H8G2 361 aa14.39□□□□□ -0.11
SDC2-201ENST00000302190 CLIC5Q9NZA1 410 aa14.39□□□□□ -0.11
SDC2-201ENST00000302190 VANGL2Q9ULK5 521 aa14.39□□□□□ -0.11
SDC2-201ENST00000302190 A6NHS1 94 aa14.39□□□□□ -0.11
SDC2-201ENST00000302190 BUD23O43709 281 aaKnown RBP14.39□□□□□ -0.11
SDC2-201ENST00000302190 MSCO60682 206 aa14.39□□□□□ -0.11
SDC2-201ENST00000302190 ATP6V1G1O75348 118 aa14.39□□□□□ -0.11
SDC2-201ENST00000302190 ARIH2O95376 493 aa14.39□□□□□ -0.11
SDC2-201ENST00000302190 IMPDH2P12268 514 aa14.39□□□□□ -0.11
SDC2-201ENST00000302190 PARP6Q2NL67 630 aa14.39□□□□□ -0.11
SDC2-201ENST00000302190 TRMT5Q32P41 509 aaKnown RBP14.39□□□□□ -0.11
SDC2-201ENST00000302190 FBXO47Q5MNV8 452 aa14.39□□□□□ -0.11
SDC2-201ENST00000302190 PRAMEF19Q5SWL8 479 aa14.39□□□□□ -0.11
SDC2-201ENST00000302190 CGB2Q6NT52 195 aa14.39□□□□□ -0.11
SDC2-201ENST00000302190 ZBTB46Q86UZ6 589 aa14.39□□□□□ -0.11
SDC2-201ENST00000302190 PCDH20Q8N6Y1 951 aaKnown RBP14.39□□□□□ -0.11
SDC2-201ENST00000302190 TDRD5Q8NAT2 981 aaKnown RBP14.39□□□□□ -0.11
SDC2-201ENST00000302190 PCDH19Q8TAB3 1148 aa14.39□□□□□ -0.11
SDC2-201ENST00000302190 SKA2Q8WVK7 121 aaPredicted RBP14.39□□□□□ -0.11
SDC2-201ENST00000302190 SPON2Q9BUD6 331 aa14.39□□□□□ -0.11
SDC2-201ENST00000302190 CPSF3Q9UKF6 684 aaKnown RBP14.39□□□□□ -0.11
SDC2-201ENST00000302190 CDY2AQ9Y6F7 541 aa14.39□□□□□ -0.11
SDC2-201ENST00000302190 CDY1Q9Y6F8 540 aa14.39□□□□□ -0.11
SDC2-201ENST00000302190 CITO14578 2027 aa14.39□□□□□ -0.11
SDC2-201ENST00000302190 SMAPO00193 183 aa14.39□□□□□ -0.11
SDC2-201ENST00000302190 MAGEB2O15479 319 aa14.39□□□□□ -0.11
SDC2-201ENST00000302190 PLA2G6O60733 806 aa14.39□□□□□ -0.11
SDC2-201ENST00000302190 NOL3O60936 208 aaKnown RBP14.39□□□□□ -0.11
SDC2-201ENST00000302190 SUPT3HO75486 399 aa14.39□□□□□ -0.11
SDC2-201ENST00000302190 RECQL4O94761 1208 aa14.39□□□□□ -0.11
SDC2-201ENST00000302190 VAPBO95292 243 aa14.39□□□□□ -0.11
SDC2-201ENST00000302190 ZNF252P-AS1Q0IIN9 211 aa14.39□□□□□ -0.11
SDC2-201ENST00000302190 MTA1Q13330 715 aa14.39□□□□□ -0.11
SDC2-201ENST00000302190 NRF1Q16656 503 aa14.39□□□□□ -0.11
SDC2-201ENST00000302190 PLEKHG4Q58EX7 1191 aa14.39□□□□□ -0.11
SDC2-201ENST00000302190 WDTC1Q8N5D0 677 aa14.39□□□□□ -0.11
SDC2-201ENST00000302190 NAT8LQ8N9F0 302 aa14.39□□□□□ -0.11
SDC2-201ENST00000302190 DNAJB3Q8WWF6 145 aa14.39□□□□□ -0.11
SDC2-201ENST00000302190 KCNK16Q96T55 309 aa14.39□□□□□ -0.11
SDC2-201ENST00000302190 EBNA1BP2Q99848 306 aaKnown RBP14.39□□□□□ -0.11
SDC2-201ENST00000302190 DPEP3Q9H4B8 488 aa14.39□□□□□ -0.11
SDC2-201ENST00000302190 TCF7L2Q9NQB0 619 aa14.39□□□□□ -0.11
SDC2-201ENST00000302190 TUBGCP4Q9UGJ1 667 aa14.39□□□□□ -0.11
SDC2-201ENST00000302190 PLLPQ9Y342 182 aa14.39□□□□□ -0.11
SDC2-201ENST00000302190 CASTOR2A6NHX0 329 aa14.38□□□□□ -0.11
SDC2-201ENST00000302190 RTP1P59025 263 aa14.38□□□□□ -0.11
SDC2-201ENST00000302190 CSHL1Q14406 222 aa14.38□□□□□ -0.11
SDC2-201ENST00000302190 CST9Q5W186 159 aa14.38□□□□□ -0.11
SDC2-201ENST00000302190 SLCO2A1Q92959 643 aa14.38□□□□□ -0.11
SDC2-201ENST00000302190 CYTH4Q9UIA0 394 aa14.38□□□□□ -0.11
SDC2-201ENST00000302190 MFHAS1Q9Y4C4 1052 aa14.38□□□□□ -0.11
SDC2-201ENST00000302190 ATP6AP2A0A1C7CYW4 349 aa14.38□□□□□ -0.11
SDC2-201ENST00000302190 ASB14A6NK59 587 aa14.38□□□□□ -0.11
SDC2-201ENST00000302190 AKAP10O43572 662 aa14.38□□□□□ -0.11
SDC2-201ENST00000302190 ATP6AP2O75787 350 aa14.38□□□□□ -0.11
SDC2-201ENST00000302190 EDN1P05305 212 aa14.38□□□□□ -0.11
SDC2-201ENST00000302190 ANPEPP15144 967 aa14.38□□□□□ -0.11
SDC2-201ENST00000302190 SKIV2L2P42285 1042 aaKnown RBP14.38□□□□□ -0.11
SDC2-201ENST00000302190 ASPAP45381 313 aa14.38□□□□□ -0.11
SDC2-201ENST00000302190 YWHAHQ04917 246 aaPredicted RBP14.38□□□□□ -0.11
SDC2-201ENST00000302190 PIGZQ86VD9 579 aa14.38□□□□□ -0.11
SDC2-201ENST00000302190 ZIC5Q96T25 663 aa14.38□□□□□ -0.11
SDC2-201ENST00000302190 WDCPQ9H6R7 721 aa14.38□□□□□ -0.11
SDC2-201ENST00000302190 COPS7BQ9H9Q2 264 aaPredicted RBP14.38□□□□□ -0.11
SDC2-201ENST00000302190 KRT82Q9NSB4 513 aa14.38□□□□□ -0.11
SDC2-201ENST00000302190 PPEF2O14830 753 aa14.38□□□□□ -0.11
SDC2-201ENST00000302190 B3GAT3O94766 335 aa14.38□□□□□ -0.11
SDC2-201ENST00000302190 CYP2B6P20813 491 aa14.38□□□□□ -0.11
SDC2-201ENST00000302190 PTP4A2Q12974 167 aa14.38□□□□□ -0.11
SDC2-201ENST00000302190 DGKDQ16760 1214 aa14.38□□□□□ -0.11
SDC2-201ENST00000302190 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP14.38□□□□□ -0.11
SDC2-201ENST00000302190 ADGRF2Q8IZF7 708 aa14.38□□□□□ -0.11
SDC2-201ENST00000302190 SH3TC2Q8TF17 1288 aa14.38□□□□□ -0.11
SDC2-201ENST00000302190 SYBUQ9NX95 663 aa14.38□□□□□ -0.11
SDC2-201ENST00000302190 KCNK4Q9NYG8 393 aa14.38□□□□□ -0.11
SDC2-201ENST00000302190 MAFBQ9Y5Q3 323 aaPredicted RBP14.38□□□□□ -0.11
SDC2-201ENST00000302190 SNX13Q9Y5W8 968 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms