RNA–Protein interactions for RNA: ENST00000298173.7

GTF2A1-201, Transcript of general transcription factor IIA subunit 1, humanhuman

TSL 2

Gene GTF2A1, Length 1,677 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-201ENST00000298173 BZW1Q7L1Q6 419 aaKnown RBP25.37■■□□□ 1.65
GTF2A1-201ENST00000298173 ZC3H18Q86VM9 953 aaKnown RBP25.37■■□□□ 1.65
GTF2A1-201ENST00000298173 NLRP14Q86W24 1093 aa25.37■■□□□ 1.65
GTF2A1-201ENST00000298173 EPB41L5Q9HCM4 733 aa25.37■■□□□ 1.65
GTF2A1-201ENST00000298173 DZANK1Q9NVP4 752 aa25.37■■□□□ 1.65
GTF2A1-201ENST00000298173 LMCD1Q9NZU5 365 aa25.37■■□□□ 1.65
GTF2A1-201ENST00000298173 RAD54BQ9Y620 910 aa25.37■■□□□ 1.65
GTF2A1-201ENST00000298173 C2orf16Q68DN1 1984 aa25.37■■□□□ 1.65
GTF2A1-201ENST00000298173 HELZP42694 1942 aaKnown RBP25.36■■□□□ 1.65
GTF2A1-201ENST00000298173 BCLAF3A2AJT9 711 aaKnown RBP25.36■■□□□ 1.65
GTF2A1-201ENST00000298173 DYNC1I1O14576 645 aa25.36■■□□□ 1.65
GTF2A1-201ENST00000298173 MAP3K6O95382 1288 aa25.36■■□□□ 1.65
GTF2A1-201ENST00000298173 LATS1O95835 1130 aa25.36■■□□□ 1.65
GTF2A1-201ENST00000298173 TACR2P21452 398 aa25.36■■□□□ 1.65
GTF2A1-201ENST00000298173 SLC6A4P31645 630 aa25.36■■□□□ 1.65
GTF2A1-201ENST00000298173 DRG2P55039 364 aaKnown RBP25.36■■□□□ 1.65
GTF2A1-201ENST00000298173 VSNL1P62760 191 aa25.36■■□□□ 1.65
GTF2A1-201ENST00000298173 TRADDQ15628 312 aa25.36■■□□□ 1.65
GTF2A1-201ENST00000298173 TCEAL5Q5H9L2 206 aa25.36■■□□□ 1.65
GTF2A1-201ENST00000298173 GPR158Q5T848 1215 aa25.36■■□□□ 1.65
GTF2A1-201ENST00000298173 NPWQ8N729 165 aa25.36■■□□□ 1.65
GTF2A1-201ENST00000298173 EFHBQ8N7U6 833 aa25.36■■□□□ 1.65
GTF2A1-201ENST00000298173 SMG7Q92540 1137 aaKnown RBP25.36■■□□□ 1.65
GTF2A1-201ENST00000298173 IGSF8Q969P0 613 aa25.36■■□□□ 1.65
GTF2A1-201ENST00000298173 MYEOVQ96EZ4 313 aa25.36■■□□□ 1.65
GTF2A1-201ENST00000298173 CCDC114Q96M63 670 aa25.36■■□□□ 1.65
GTF2A1-201ENST00000298173 IGFLR1Q9H665 355 aa25.36■■□□□ 1.65
GTF2A1-201ENST00000298173 C10orf88Q9H8K7 445 aa25.36■■□□□ 1.65
GTF2A1-201ENST00000298173 USP29Q9HBJ7 922 aa25.36■■□□□ 1.65
GTF2A1-201ENST00000298173 MPP6Q9NZW5 540 aa25.36■■□□□ 1.65
GTF2A1-201ENST00000298173 UTP11Q9Y3A2 253 aaKnown RBP25.36■■□□□ 1.65
GTF2A1-201ENST00000298173 SPDYE4A6NLX3 237 aa25.36■■□□□ 1.65
GTF2A1-201ENST00000298173 ZNF197O14709 1029 aa25.36■■□□□ 1.65
GTF2A1-201ENST00000298173 GAS8O95995 478 aa25.36■■□□□ 1.65
GTF2A1-201ENST00000298173 CKMP06732 381 aa25.36■■□□□ 1.65
GTF2A1-201ENST00000298173 STIP1P31948 543 aaKnown RBP25.36■■□□□ 1.65
GTF2A1-201ENST00000298173 ADGRF1Q5T601 910 aa25.36■■□□□ 1.65
GTF2A1-201ENST00000298173 POTEHQ6S545 545 aa25.36■■□□□ 1.65
GTF2A1-201ENST00000298173 TMC5Q6UXY8 1006 aa25.36■■□□□ 1.65
GTF2A1-201ENST00000298173 Q6ZNB5 142 aa25.36■■□□□ 1.65
GTF2A1-201ENST00000298173 CMTM8Q8IZV2 173 aa25.36■■□□□ 1.65
GTF2A1-201ENST00000298173 ZYG11BQ9C0D3 744 aa25.36■■□□□ 1.65
GTF2A1-201ENST00000298173 RAB17Q9H0T7 212 aa25.36■■□□□ 1.65
GTF2A1-201ENST00000298173 ZNF212Q9UDV6 495 aa25.36■■□□□ 1.65
GTF2A1-201ENST00000298173 ARHGAP26Q9UNA1 814 aa25.36■■□□□ 1.65
GTF2A1-201ENST00000298173 IRF1P10914 325 aa25.35■■□□□ 1.65
GTF2A1-201ENST00000298173 RHOQP17081 205 aa25.35■■□□□ 1.65
GTF2A1-201ENST00000298173 IRAK1P51617 712 aa25.35■■□□□ 1.65
GTF2A1-201ENST00000298173 PTK6Q13882 451 aa25.35■■□□□ 1.65
GTF2A1-201ENST00000298173 ARHGAP15Q53QZ3 475 aa25.35■■□□□ 1.65
GTF2A1-201ENST00000298173 CCNI2Q6ZMN8 369 aaPredicted RBP25.35■■□□□ 1.65
GTF2A1-201ENST00000298173 HTR3DQ70Z44 454 aa25.35■■□□□ 1.65
GTF2A1-201ENST00000298173 TP53INP2Q8IXH6 220 aa25.35■■□□□ 1.65
GTF2A1-201ENST00000298173 IFT20Q8IY31 132 aa25.35■■□□□ 1.65
GTF2A1-201ENST00000298173 RTL3Q8N8U3 475 aaKnown RBP25.35■■□□□ 1.65
GTF2A1-201ENST00000298173 ZMYM5Q9UJ78 669 aa25.35■■□□□ 1.65
GTF2A1-201ENST00000298173 H7C0C1 242 aa25.34■■□□□ 1.65
GTF2A1-201ENST00000298173 IVDP26440 423 aa25.34■■□□□ 1.65
GTF2A1-201ENST00000298173 TNFRSF8P28908 595 aa25.34■■□□□ 1.65
GTF2A1-201ENST00000298173 SERPINB6P35237 376 aa25.34■■□□□ 1.65
GTF2A1-201ENST00000298173 ATP5OP48047 213 aa25.34■■□□□ 1.65
GTF2A1-201ENST00000298173 GDF10P55107 478 aa25.34■■□□□ 1.65
GTF2A1-201ENST00000298173 ALFQ53S48 1182 aa25.34■■□□□ 1.65
GTF2A1-201ENST00000298173 DARS2Q6PI48 645 aaKnown RBP25.34■■□□□ 1.65
GTF2A1-201ENST00000298173 CHSY1Q86X52 802 aa25.34■■□□□ 1.65
GTF2A1-201ENST00000298173 LZTR1Q8N653 840 aa25.34■■□□□ 1.65
GTF2A1-201ENST00000298173 GLIS1Q8NBF1 620 aa25.34■■□□□ 1.65
GTF2A1-201ENST00000298173 CASKIN2Q8WXE0 1202 aa25.34■■□□□ 1.65
GTF2A1-201ENST00000298173 PIDD1Q9HB75 910 aa25.34■■□□□ 1.65
GTF2A1-201ENST00000298173 NDFIP2Q9NV92 336 aa25.34■■□□□ 1.65
GTF2A1-201ENST00000298173 TMEM248Q9NWD8 314 aa25.34■■□□□ 1.65
GTF2A1-201ENST00000298173 ESYT3A0FGR9 886 aa25.33■■□□□ 1.65
GTF2A1-201ENST00000298173 HACD1B0YJ81 288 aa25.33■■□□□ 1.65
GTF2A1-201ENST00000298173 CNTN5O94779 1100 aa25.33■■□□□ 1.65
GTF2A1-201ENST00000298173 MCM3P25205 808 aa25.33■■□□□ 1.65
GTF2A1-201ENST00000298173 PPP1R7Q15435 360 aa25.33■■□□□ 1.65
GTF2A1-201ENST00000298173 SLC45A4Q5BKX6 768 aa25.33■■□□□ 1.65
GTF2A1-201ENST00000298173 AFMIDQ63HM1 303 aa25.33■■□□□ 1.65
GTF2A1-201ENST00000298173 B4GALNT4Q76KP1 1039 aa25.33■■□□□ 1.65
GTF2A1-201ENST00000298173 FAM217AQ8IXS0 508 aa25.33■■□□□ 1.65
GTF2A1-201ENST00000298173 ANKRD7Q92527 254 aa25.33■■□□□ 1.65
GTF2A1-201ENST00000298173 TTYH1Q9H313 450 aaPredicted RBP25.33■■□□□ 1.65
GTF2A1-201ENST00000298173 RETREG1Q9H6L5 497 aa25.33■■□□□ 1.65
GTF2A1-201ENST00000298173 F5H5T6 163 aa25.32■■□□□ 1.64
GTF2A1-201ENST00000298173 GFRA2O00451 464 aa25.32■■□□□ 1.64
GTF2A1-201ENST00000298173 NCAM2O15394 837 aa25.32■■□□□ 1.64
GTF2A1-201ENST00000298173 LINC01565O15544 149 aa25.32■■□□□ 1.64
GTF2A1-201ENST00000298173 KRT14P02533 472 aa25.32■■□□□ 1.64
GTF2A1-201ENST00000298173 H2AFXP16104 143 aaPredicted RBP25.32■■□□□ 1.64
GTF2A1-201ENST00000298173 GALNT2Q10471 571 aa25.32■■□□□ 1.64
GTF2A1-201ENST00000298173 PDK1Q15118 436 aa25.32■■□□□ 1.64
GTF2A1-201ENST00000298173 RFWD3Q6PCD5 774 aa25.32■■□□□ 1.64
GTF2A1-201ENST00000298173 GSTA5Q7RTV2 222 aa25.32■■□□□ 1.64
GTF2A1-201ENST00000298173 ARHGAP12Q8IWW6 846 aa25.32■■□□□ 1.64
GTF2A1-201ENST00000298173 NETO2Q8NC67 525 aa25.32■■□□□ 1.64
GTF2A1-201ENST00000298173 RTP4Q96DX8 246 aa25.32■■□□□ 1.64
GTF2A1-201ENST00000298173 RPRD1AQ96P16 312 aaPredicted RBP25.32■■□□□ 1.64
GTF2A1-201ENST00000298173 QKIQ96PU8 341 aaKnown RBP eCLIP25.32■■□□□ 1.64
GTF2A1-201ENST00000298173 PRDM12Q9H4Q4 367 aa25.32■■□□□ 1.64
GTF2A1-201ENST00000298173 PRRC2BQ5JSZ5 2229 aaKnown RBP25.32■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms