RNA–Protein interactions for RNA: ENST00000296794.10

ARHGEF28-201, Transcript of Rho guanine nucleotide exchange factor 28, humanhuman

TSL 5 BASIC

Gene ARHGEF28, Length 5,246 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28-201ENST00000296794 TPP1O14773 563 aa16.39■□□□□ 0.21
ARHGEF28-201ENST00000296794 DDX3YO15523 660 aaKnown RBP16.39■□□□□ 0.21
ARHGEF28-201ENST00000296794 KRT36O76013 467 aa16.39■□□□□ 0.21
ARHGEF28-201ENST00000296794 LGALS2P05162 132 aa16.39■□□□□ 0.21
ARHGEF28-201ENST00000296794 ITGAVP06756 1048 aa16.39■□□□□ 0.21
ARHGEF28-201ENST00000296794 TPBGLP0DKB5 382 aa16.39■□□□□ 0.21
ARHGEF28-201ENST00000296794 FCGR1AP12314 374 aa16.39■□□□□ 0.21
ARHGEF28-201ENST00000296794 SWT1Q5T5J6 900 aaKnown RBP16.39■□□□□ 0.21
ARHGEF28-201ENST00000296794 FAM171A1Q5VUB5 890 aa16.39■□□□□ 0.21
ARHGEF28-201ENST00000296794 ZFP1Q6P2D0 407 aa16.39■□□□□ 0.21
ARHGEF28-201ENST00000296794 RIPOR1Q6ZS17 1223 aa16.39■□□□□ 0.21
ARHGEF28-201ENST00000296794 PTF1AQ7RTS3 328 aa16.39■□□□□ 0.21
ARHGEF28-201ENST00000296794 OTOAQ7RTW8 1153 aa16.39■□□□□ 0.21
ARHGEF28-201ENST00000296794 CERS5Q8N5B7 392 aa16.39■□□□□ 0.21
ARHGEF28-201ENST00000296794 PIWIL2Q8TC59 973 aaKnown RBP16.39■□□□□ 0.21
ARHGEF28-201ENST00000296794 SENP6Q9GZR1 1112 aaPredicted RBP16.39■□□□□ 0.21
ARHGEF28-201ENST00000296794 PORCNQ9H237 461 aa16.39■□□□□ 0.21
ARHGEF28-201ENST00000296794 IKZF4Q9H2S9 585 aa16.39■□□□□ 0.21
ARHGEF28-201ENST00000296794 NMRAL1Q9HBL8 299 aa16.39■□□□□ 0.21
ARHGEF28-201ENST00000296794 LZTS3O60299 673 aaPredicted RBP16.39■□□□□ 0.21
ARHGEF28-201ENST00000296794 ATP6V1B2P21281 511 aa16.39■□□□□ 0.21
ARHGEF28-201ENST00000296794 BEX3Q00994 111 aa16.39■□□□□ 0.21
ARHGEF28-201ENST00000296794 DEFB106AQ8N104 65 aa16.39■□□□□ 0.21
ARHGEF28-201ENST00000296794 RMND5BQ96G75 393 aaPredicted RBP16.39■□□□□ 0.21
ARHGEF28-201ENST00000296794 TTYH3Q9C0H2 523 aa16.39■□□□□ 0.21
ARHGEF28-201ENST00000296794 PRR23AA6NEV1 266 aa16.39■□□□□ 0.21
ARHGEF28-201ENST00000296794 HACD1B0YJ81 288 aa16.39■□□□□ 0.21
ARHGEF28-201ENST00000296794 GOLGA8TH3BQL2 631 aa16.39■□□□□ 0.21
ARHGEF28-201ENST00000296794 ATP4AP20648 1035 aa16.39■□□□□ 0.21
ARHGEF28-201ENST00000296794 AKAP5P24588 427 aa16.39■□□□□ 0.21
ARHGEF28-201ENST00000296794 FASP25445 335 aa16.39■□□□□ 0.21
ARHGEF28-201ENST00000296794 PRKAA2P54646 552 aa16.39■□□□□ 0.21
ARHGEF28-201ENST00000296794 OXCT1P55809 520 aa16.39■□□□□ 0.21
ARHGEF28-201ENST00000296794 TAS2R40P59535 323 aa16.39■□□□□ 0.21
ARHGEF28-201ENST00000296794 NAB1Q13506 487 aa16.39■□□□□ 0.21
ARHGEF28-201ENST00000296794 IKBKEQ14164 716 aa16.39■□□□□ 0.21
ARHGEF28-201ENST00000296794 FASTKQ14296 549 aaKnown RBP16.39■□□□□ 0.21
ARHGEF28-201ENST00000296794 CXCL17Q6UXB2 119 aa16.39■□□□□ 0.21
ARHGEF28-201ENST00000296794 CIPCQ9C0C6 399 aa16.39■□□□□ 0.21
ARHGEF28-201ENST00000296794 FBXO44Q9H4M3 255 aa16.39■□□□□ 0.21
ARHGEF28-201ENST00000296794 SYTL2Q9HCH5 934 aa16.39■□□□□ 0.21
ARHGEF28-201ENST00000296794 TSC22D4Q9Y3Q8 395 aa16.39■□□□□ 0.21
ARHGEF28-201ENST00000296794 USP12O75317 370 aa16.38■□□□□ 0.21
ARHGEF28-201ENST00000296794 GLP2RO95838 553 aa16.38■□□□□ 0.21
ARHGEF28-201ENST00000296794 SLURP2P0DP57 97 aa16.38■□□□□ 0.21
ARHGEF28-201ENST00000296794 NPY2RP49146 381 aa16.38■□□□□ 0.21
ARHGEF28-201ENST00000296794 NOMO3P69849 1222 aa16.38■□□□□ 0.21
ARHGEF28-201ENST00000296794 UBE3AQ05086 875 aa16.38■□□□□ 0.21
ARHGEF28-201ENST00000296794 TTLL9Q3SXZ7 439 aa16.38■□□□□ 0.21
ARHGEF28-201ENST00000296794 DEPDC1Q5TB30 811 aa16.38■□□□□ 0.21
ARHGEF28-201ENST00000296794 DHFR2Q86XF0 187 aa16.38■□□□□ 0.21
ARHGEF28-201ENST00000296794 CENPLQ8N0S6 344 aaPredicted RBP16.38■□□□□ 0.21
ARHGEF28-201ENST00000296794 PPP1R10Q96QC0 940 aaKnown RBP16.38■□□□□ 0.21
ARHGEF28-201ENST00000296794 CDK5RAP1Q96SZ6 601 aaKnown RBP16.38■□□□□ 0.21
ARHGEF28-201ENST00000296794 DDX18Q9NVP1 670 aaKnown RBP16.38■□□□□ 0.21
ARHGEF28-201ENST00000296794 VPS28Q9UK41 221 aa16.38■□□□□ 0.21
ARHGEF28-201ENST00000296794 PLA2G4CQ9UP65 541 aa16.38■□□□□ 0.21
ARHGEF28-201ENST00000296794 ERI2A8K979 691 aaKnown RBP16.38■□□□□ 0.21
ARHGEF28-201ENST00000296794 AGPSO00116 658 aa16.38■□□□□ 0.21
ARHGEF28-201ENST00000296794 TULP2O00295 520 aa16.38■□□□□ 0.21
ARHGEF28-201ENST00000296794 VAPBO95292 243 aa16.38■□□□□ 0.21
ARHGEF28-201ENST00000296794 ACAT1P24752 427 aaKnown RBP16.38■□□□□ 0.21
ARHGEF28-201ENST00000296794 RPL7AP62424 266 aaKnown RBP16.38■□□□□ 0.21
ARHGEF28-201ENST00000296794 SLC25A3Q00325 362 aa16.38■□□□□ 0.21
ARHGEF28-201ENST00000296794 NT5DC4Q86YG4 428 aa16.38■□□□□ 0.21
ARHGEF28-201ENST00000296794 PHF13Q86YI8 300 aaPredicted RBP16.38■□□□□ 0.21
ARHGEF28-201ENST00000296794 APBA2Q99767 749 aa16.38■□□□□ 0.21
ARHGEF28-201ENST00000296794 SPATA16Q9BXB7 569 aa16.38■□□□□ 0.21
ARHGEF28-201ENST00000296794 EMILIN2Q9BXX0 1053 aa16.38■□□□□ 0.21
ARHGEF28-201ENST00000296794 PIF1Q9H611 641 aa16.38■□□□□ 0.21
ARHGEF28-201ENST00000296794 TIMM13Q9Y5L4 95 aaPredicted RBP16.38■□□□□ 0.21
ARHGEF28-201ENST00000296794 MRASO14807 208 aa16.38■□□□□ 0.21
ARHGEF28-201ENST00000296794 FKTNO75072 461 aa16.38■□□□□ 0.21
ARHGEF28-201ENST00000296794 ERVK-10P10266 1014 aa16.38■□□□□ 0.21
ARHGEF28-201ENST00000296794 BST1Q10588 318 aa16.38■□□□□ 0.21
ARHGEF28-201ENST00000296794 AARS2Q5JTZ9 985 aaKnown RBP16.38■□□□□ 0.21
ARHGEF28-201ENST00000296794 LRRC8DQ7L1W4 858 aa16.38■□□□□ 0.21
ARHGEF28-201ENST00000296794 OOSP2Q86WS3 158 aa16.38■□□□□ 0.21
ARHGEF28-201ENST00000296794 B4GALNT2Q8NHY0 566 aa16.38■□□□□ 0.21
ARHGEF28-201ENST00000296794 ZFRQ96KR1 1074 aaKnown RBP16.38■□□□□ 0.21
ARHGEF28-201ENST00000296794 KCTD14Q9BQ13 255 aaPredicted RBP16.38■□□□□ 0.21
ARHGEF28-201ENST00000296794 UBXN6Q9BZV1 441 aa16.38■□□□□ 0.21
ARHGEF28-201ENST00000296794 FAM192AQ9GZU8 254 aa16.38■□□□□ 0.21
ARHGEF28-201ENST00000296794 NEUROG2Q9H2A3 272 aa16.38■□□□□ 0.21
ARHGEF28-201ENST00000296794 TLR8Q9NR97 1041 aaKnown RBP16.38■□□□□ 0.21
ARHGEF28-201ENST00000296794 TBC1D13Q9NVG8 400 aa16.38■□□□□ 0.21
ARHGEF28-201ENST00000296794 ZNF470Q6ECI4 717 aa16.38■□□□□ 0.21
ARHGEF28-201ENST00000296794 CYP2R1Q6VVX0 501 aa16.38■□□□□ 0.21
ARHGEF28-201ENST00000296794 TRABD2AQ86V40 505 aa16.38■□□□□ 0.21
ARHGEF28-201ENST00000296794 USP6NLQ92738 828 aa16.38■□□□□ 0.21
ARHGEF28-201ENST00000296794 ACSS3Q9H6R3 686 aa16.38■□□□□ 0.21
ARHGEF28-201ENST00000296794 COPS7BQ9H9Q2 264 aaPredicted RBP16.38■□□□□ 0.21
ARHGEF28-201ENST00000296794 ITM2BQ9Y287 266 aa16.38■□□□□ 0.21
ARHGEF28-201ENST00000296794 hCG_1818297A0A087WSY0 165 aa16.37■□□□□ 0.21
ARHGEF28-201ENST00000296794 UBA1P22314 1058 aaKnown RBP16.37■□□□□ 0.21
ARHGEF28-201ENST00000296794 PKNOX1P55347 436 aa16.37■□□□□ 0.21
ARHGEF28-201ENST00000296794 MAP2K5Q13163 448 aa16.37■□□□□ 0.21
ARHGEF28-201ENST00000296794 XRCC4Q13426 336 aa16.37■□□□□ 0.21
ARHGEF28-201ENST00000296794 LRP10Q7Z4F1 713 aa16.37■□□□□ 0.21
ARHGEF28-201ENST00000296794 CARNMT1Q8N4J0 409 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 161.5 ms