RNA–Protein interactions for RNA: ENST00000291458.9

CCDC58-201, Transcript of coiled-coil domain containing 58, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC58, Length 720 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-201ENST00000291458 MAP7D1Q3KQU3 841 aa10.13□□□□□ -0.79
CCDC58-201ENST00000291458 PIK3R6Q5UE93 754 aa10.13□□□□□ -0.79
CCDC58-201ENST00000291458 MBLAC2Q68D91 279 aa10.13□□□□□ -0.79
CCDC58-201ENST00000291458 OLFML1Q6UWY5 402 aa10.13□□□□□ -0.79
CCDC58-201ENST00000291458 LPCAT2Q7L5N7 544 aa10.13□□□□□ -0.79
CCDC58-201ENST00000291458 TMEM110Q86TL2 294 aa10.13□□□□□ -0.79
CCDC58-201ENST00000291458 FAM124AQ86V42 546 aa10.13□□□□□ -0.79
CCDC58-201ENST00000291458 CCDC117Q8IWD4 279 aaPredicted RBP10.13□□□□□ -0.79
CCDC58-201ENST00000291458 GPR161Q8N6U8 529 aaKnown RBP10.13□□□□□ -0.79
CCDC58-201ENST00000291458 TMEM35BQ8NCS4 154 aa10.13□□□□□ -0.79
CCDC58-201ENST00000291458 STK32AQ8WU08 396 aa10.13□□□□□ -0.79
CCDC58-201ENST00000291458 CPA5Q8WXQ8 436 aa10.13□□□□□ -0.79
CCDC58-201ENST00000291458 GABRG3Q99928 467 aa10.13□□□□□ -0.79
CCDC58-201ENST00000291458 EDEM2Q9BV94 578 aa10.13□□□□□ -0.79
CCDC58-201ENST00000291458 TRIM62Q9BVG3 475 aa10.13□□□□□ -0.79
CCDC58-201ENST00000291458 MTG2Q9H4K7 406 aa10.13□□□□□ -0.79
CCDC58-201ENST00000291458 THAP10Q9P2Z0 257 aaPredicted RBP10.13□□□□□ -0.79
CCDC58-201ENST00000291458 SLC27A6Q9Y2P4 619 aa10.13□□□□□ -0.79
CCDC58-201ENST00000291458 SNX10Q9Y5X0 201 aa10.13□□□□□ -0.79
CCDC58-201ENST00000291458 IGHV1OR15-9A0A0B4J2B8 117 aa10.12□□□□□ -0.79
CCDC58-201ENST00000291458 MED19A0JLT2 244 aaPredicted RBP10.12□□□□□ -0.79
CCDC58-201ENST00000291458 BCLAF3A2AJT9 711 aaKnown RBP10.12□□□□□ -0.79
CCDC58-201ENST00000291458 LGALS16A8MUM7 142 aa10.12□□□□□ -0.79
CCDC58-201ENST00000291458 F5H5T6 163 aa10.12□□□□□ -0.79
CCDC58-201ENST00000291458 H0Y626 953 aa10.12□□□□□ -0.79
CCDC58-201ENST00000291458 M0QYT0 321 aa10.12□□□□□ -0.79
CCDC58-201ENST00000291458 GJB6O95452 261 aa10.12□□□□□ -0.79
CCDC58-201ENST00000291458 CAVIN2O95810 425 aa10.12□□□□□ -0.79
CCDC58-201ENST00000291458 S1PR4O95977 384 aa10.12□□□□□ -0.79
CCDC58-201ENST00000291458 CFIP05156 583 aa10.12□□□□□ -0.79
CCDC58-201ENST00000291458 POLR2EP19388 210 aaKnown RBP10.12□□□□□ -0.79
CCDC58-201ENST00000291458 ABCB4P21439 1286 aa10.12□□□□□ -0.79
CCDC58-201ENST00000291458 IRAK1P51617 712 aa10.12□□□□□ -0.79
CCDC58-201ENST00000291458 BPIFB4P59827 614 aa10.12□□□□□ -0.79
CCDC58-201ENST00000291458 RING1Q06587 406 aa10.12□□□□□ -0.79
CCDC58-201ENST00000291458 MS4A13Q5J8X5 152 aa10.12□□□□□ -0.79
CCDC58-201ENST00000291458 EFHC1Q5JVL4 640 aa10.12□□□□□ -0.79
CCDC58-201ENST00000291458 LYSMD4Q5XG99 296 aa10.12□□□□□ -0.79
CCDC58-201ENST00000291458 AHI1Q8N157 1196 aa10.12□□□□□ -0.79
CCDC58-201ENST00000291458 ATP6V0D2Q8N8Y2 350 aa10.12□□□□□ -0.79
CCDC58-201ENST00000291458 NEK11Q8NG66 645 aa10.12□□□□□ -0.79
CCDC58-201ENST00000291458 OLIG1Q8TAK6 271 aa10.12□□□□□ -0.79
CCDC58-201ENST00000291458 NETO1Q8TDF5 533 aa10.12□□□□□ -0.79
CCDC58-201ENST00000291458 EPS8L1Q8TE68 723 aa10.12□□□□□ -0.79
CCDC58-201ENST00000291458 WFIKKN2Q8TEU8 576 aa10.12□□□□□ -0.79
CCDC58-201ENST00000291458 SNX19Q92543 992 aa10.12□□□□□ -0.79
CCDC58-201ENST00000291458 SLC39A13Q96H72 371 aa10.12□□□□□ -0.79
CCDC58-201ENST00000291458 ZC3H10Q96K80 434 aaKnown RBP10.12□□□□□ -0.79
CCDC58-201ENST00000291458 MRGPRX1Q96LB2 322 aa10.12□□□□□ -0.79
CCDC58-201ENST00000291458 HSPA12BQ96MM6 686 aa10.12□□□□□ -0.79
CCDC58-201ENST00000291458 SLC2A13Q96QE2 648 aa10.12□□□□□ -0.79
CCDC58-201ENST00000291458 DDX50Q9BQ39 737 aaKnown RBP10.12□□□□□ -0.79
CCDC58-201ENST00000291458 C11orf70Q9BRQ4 267 aa10.12□□□□□ -0.79
CCDC58-201ENST00000291458 NAA15Q9BXJ9 866 aaKnown RBP10.12□□□□□ -0.79
CCDC58-201ENST00000291458 STK33Q9BYT3 514 aa10.12□□□□□ -0.79
CCDC58-201ENST00000291458 LHX5Q9H2C1 402 aa10.12□□□□□ -0.79
CCDC58-201ENST00000291458 PRDM16Q9HAZ2 1276 aa10.12□□□□□ -0.79
CCDC58-201ENST00000291458 METTL5Q9NRN9 209 aaKnown RBP10.12□□□□□ -0.79
CCDC58-201ENST00000291458 STOML2Q9UJZ1 356 aa10.12□□□□□ -0.79
CCDC58-201ENST00000291458 FBXO10Q9UK96 956 aa10.12□□□□□ -0.79
CCDC58-201ENST00000291458 STARD13Q9Y3M8 1113 aa10.12□□□□□ -0.79
CCDC58-201ENST00000291458 MEI4A8MW99 385 aa10.11□□□□□ -0.79
CCDC58-201ENST00000291458 PRR5-ARHGAP8B1AHC4 643 aa10.11□□□□□ -0.79
CCDC58-201ENST00000291458 GFRA2O00451 464 aa10.11□□□□□ -0.79
CCDC58-201ENST00000291458 LRP3O75074 770 aa10.11□□□□□ -0.79
CCDC58-201ENST00000291458 NDUFS2O75306 463 aa10.11□□□□□ -0.79
CCDC58-201ENST00000291458 LUC7L3O95232 432 aaKnown RBP10.11□□□□□ -0.79
CCDC58-201ENST00000291458 ZNF806P0C7X5 589 aa10.11□□□□□ -0.79
CCDC58-201ENST00000291458 PDGFRAP16234 1089 aa10.11□□□□□ -0.79
CCDC58-201ENST00000291458 ITPKAP23677 461 aa10.11□□□□□ -0.79
CCDC58-201ENST00000291458 SOX5P35711 763 aa10.11□□□□□ -0.79
CCDC58-201ENST00000291458 CSKP41240 450 aa10.11□□□□□ -0.79
CCDC58-201ENST00000291458 CTSOP43234 321 aaPredicted RBP10.11□□□□□ -0.79
CCDC58-201ENST00000291458 MAPK8P45983 427 aa10.11□□□□□ -0.79
CCDC58-201ENST00000291458 ATXN1P54253 815 aaKnown RBP10.11□□□□□ -0.79
CCDC58-201ENST00000291458 ZNF445P59923 1031 aa10.11□□□□□ -0.79
CCDC58-201ENST00000291458 ARHGAP8P85298 464 aa10.11□□□□□ -0.79
CCDC58-201ENST00000291458 SLC6A3Q01959 620 aa10.11□□□□□ -0.79
CCDC58-201ENST00000291458 NNTQ13423 1086 aa10.11□□□□□ -0.79
CCDC58-201ENST00000291458 PUM1Q14671 1186 aaKnown RBP eCLIP10.11□□□□□ -0.79
CCDC58-201ENST00000291458 NUMA1Q14980 2115 aa10.11□□□□□ -0.79
CCDC58-201ENST00000291458 EIF4HQ15056 248 aaKnown RBP10.11□□□□□ -0.79
CCDC58-201ENST00000291458 FSCBQ5H9T9 825 aa10.11□□□□□ -0.79
CCDC58-201ENST00000291458 CT47A1Q5JQC4 288 aaPredicted RBP10.11□□□□□ -0.79
CCDC58-201ENST00000291458 OTUD1Q5VV17 481 aaPredicted RBP10.11□□□□□ -0.79
CCDC58-201ENST00000291458 RNF43Q68DV7 783 aa10.11□□□□□ -0.79
CCDC58-201ENST00000291458 SLC26A9Q7LBE3 791 aa10.11□□□□□ -0.79
CCDC58-201ENST00000291458 ADIPOR2Q86V24 386 aa10.11□□□□□ -0.79
CCDC58-201ENST00000291458 C11orf74Q86VG3 221 aa10.11□□□□□ -0.79
CCDC58-201ENST00000291458 ERICH1Q86X53 443 aa10.11□□□□□ -0.79
CCDC58-201ENST00000291458 RGL4Q8IZJ4 473 aa10.11□□□□□ -0.79
CCDC58-201ENST00000291458 SLC30A5Q8TAD4 765 aa10.11□□□□□ -0.79
CCDC58-201ENST00000291458 LOXL4Q96JB6 756 aa10.11□□□□□ -0.79
CCDC58-201ENST00000291458 BTN2A3PQ96KV6 586 aa10.11□□□□□ -0.79
CCDC58-201ENST00000291458 RPRD1AQ96P16 312 aaPredicted RBP10.11□□□□□ -0.79
CCDC58-201ENST00000291458 TBCBQ99426 244 aa10.11□□□□□ -0.79
CCDC58-201ENST00000291458 SLC2A11Q9BYW1 496 aa10.11□□□□□ -0.79
CCDC58-201ENST00000291458 MKRN2Q9H000 416 aaKnown RBP10.11□□□□□ -0.79
CCDC58-201ENST00000291458 SIK2Q9H0K1 926 aa10.11□□□□□ -0.79
CCDC58-201ENST00000291458 TMPRSS4Q9NRS4 437 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 153.5 ms