RNA–Protein interactions for RNA: ENST00000289292.11

SHROOM4-201, Transcript of shroom family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHROOM4, Length 6,261 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4-201ENST00000289292 SHPRHQ149N8 1683 aa15.65■□□□□ 0.1
SHROOM4-201ENST00000289292 LPCAT4Q643R3 524 aa15.65■□□□□ 0.1
SHROOM4-201ENST00000289292 LRMDAQ9H2I8 198 aa15.65■□□□□ 0.1
SHROOM4-201ENST00000289292 KCNQ5Q9NR82 932 aa15.65■□□□□ 0.1
SHROOM4-201ENST00000289292 RGS18Q9NS28 235 aa15.65■□□□□ 0.1
SHROOM4-201ENST00000289292 GSNP06396 782 aa15.65■□□□□ 0.1
SHROOM4-201ENST00000289292 RPL22P35268 128 aaKnown RBP15.65■□□□□ 0.1
SHROOM4-201ENST00000289292 C1orf186Q6ZWK4 172 aa15.65■□□□□ 0.1
SHROOM4-201ENST00000289292 OR52K1Q8NGK4 314 aa15.65■□□□□ 0.1
SHROOM4-201ENST00000289292 AVENQ9NQS1 362 aaPredicted RBP15.65■□□□□ 0.1
SHROOM4-201ENST00000289292 PCDHB8Q9UN66 801 aa15.65■□□□□ 0.1
SHROOM4-201ENST00000289292 FMO1Q01740 532 aa15.64■□□□□ 0.09
SHROOM4-201ENST00000289292 PDK4Q16654 411 aa15.64■□□□□ 0.09
SHROOM4-201ENST00000289292 IRF2BP2Q7Z5L9 587 aa15.64■□□□□ 0.09
SHROOM4-201ENST00000289292 MAGEE2Q8TD90 523 aaPredicted RBP15.64■□□□□ 0.09
SHROOM4-201ENST00000289292 PURBQ96QR8 312 aaKnown RBP15.64■□□□□ 0.09
SHROOM4-201ENST00000289292 CORO1CQ9ULV4 474 aaPredicted RBP15.64■□□□□ 0.09
SHROOM4-201ENST00000289292 DRG1Q9Y295 367 aaKnown RBP15.64■□□□□ 0.09
SHROOM4-201ENST00000289292 KIDINS220Q9ULH0 1771 aa15.64■□□□□ 0.09
SHROOM4-201ENST00000289292 SH3BGRLO75368 114 aa15.64■□□□□ 0.09
SHROOM4-201ENST00000289292 ATG7O95352 703 aa15.64■□□□□ 0.09
SHROOM4-201ENST00000289292 STAU1O95793 577 aaKnown RBP15.64■□□□□ 0.09
SHROOM4-201ENST00000289292 DGCR6Q14129 220 aa15.64■□□□□ 0.09
SHROOM4-201ENST00000289292 MYBPC2Q14324 1141 aa15.64■□□□□ 0.09
SHROOM4-201ENST00000289292 OSMRQ99650 979 aa15.64■□□□□ 0.09
SHROOM4-201ENST00000289292 STK39Q9UEW8 545 aa15.64■□□□□ 0.09
SHROOM4-201ENST00000289292 KIAA1257Q9ULG3 409 aa15.64■□□□□ 0.09
SHROOM4-201ENST00000289292 FZD1Q9UP38 647 aa15.64■□□□□ 0.09
SHROOM4-201ENST00000289292 KANSL1LA0AUZ9 987 aa15.64■□□□□ 0.09
SHROOM4-201ENST00000289292 C17orf102A2RUQ5 167 aa15.64■□□□□ 0.09
SHROOM4-201ENST00000289292 ASS1P00966 412 aaKnown RBP15.64■□□□□ 0.09
SHROOM4-201ENST00000289292 LDLRP01130 860 aa15.64■□□□□ 0.09
SHROOM4-201ENST00000289292 RPS7P62081 194 aaKnown RBP15.64■□□□□ 0.09
SHROOM4-201ENST00000289292 ROR2Q01974 943 aaKnown RBP15.64■□□□□ 0.09
SHROOM4-201ENST00000289292 UBASH3BQ8TF42 649 aa15.64■□□□□ 0.09
SHROOM4-201ENST00000289292 APBB2Q92870 758 aa15.64■□□□□ 0.09
SHROOM4-201ENST00000289292 BST1Q10588 318 aa15.64■□□□□ 0.09
SHROOM4-201ENST00000289292 ZNF268Q14587 947 aaPredicted RBP15.64■□□□□ 0.09
SHROOM4-201ENST00000289292 DHDDSQ86SQ9 333 aa15.64■□□□□ 0.09
SHROOM4-201ENST00000289292 FAM81AQ8TBF8 368 aa15.64■□□□□ 0.09
SHROOM4-201ENST00000289292 FBXO32Q969P5 355 aa15.64■□□□□ 0.09
SHROOM4-201ENST00000289292 CLPTM1LQ96KA5 538 aa15.64■□□□□ 0.09
SHROOM4-201ENST00000289292 KRT84Q9NSB2 600 aa15.64■□□□□ 0.09
SHROOM4-201ENST00000289292 DDX43Q9NXZ2 648 aaKnown RBP15.64■□□□□ 0.09
SHROOM4-201ENST00000289292 UBAP1Q9NZ09 502 aa15.64■□□□□ 0.09
SHROOM4-201ENST00000289292 SNX8Q9Y5X2 465 aa15.64■□□□□ 0.09
SHROOM4-201ENST00000289292 H0YC42 278 aa15.64■□□□□ 0.09
SHROOM4-201ENST00000289292 DDX5P17844 614 aaKnown RBP15.64■□□□□ 0.09
SHROOM4-201ENST00000289292 ATP6V1C1P21283 382 aa15.64■□□□□ 0.09
SHROOM4-201ENST00000289292 RRM2P31350 389 aa15.64■□□□□ 0.09
SHROOM4-201ENST00000289292 HALP42357 657 aa15.64■□□□□ 0.09
SHROOM4-201ENST00000289292 HPCAP84074 193 aa15.64■□□□□ 0.09
SHROOM4-201ENST00000289292 CRELD2Q6UXH1 353 aaPredicted RBP15.64■□□□□ 0.09
SHROOM4-201ENST00000289292 ERO1BQ86YB8 467 aa15.64■□□□□ 0.09
SHROOM4-201ENST00000289292 EID3Q8N140 333 aa15.64■□□□□ 0.09
SHROOM4-201ENST00000289292 TNS2Q63HR2 1409 aa15.63■□□□□ 0.09
SHROOM4-201ENST00000289292 GNG14A0A1W2PPG7 69 aa15.63■□□□□ 0.09
SHROOM4-201ENST00000289292 APOC4-APOC2K7ER74 178 aa15.63■□□□□ 0.09
SHROOM4-201ENST00000289292 EFCAB14O75071 495 aa15.63■□□□□ 0.09
SHROOM4-201ENST00000289292 APOC2P02655 101 aa15.63■□□□□ 0.09
SHROOM4-201ENST00000289292 GSTM1P09488 218 aa15.63■□□□□ 0.09
SHROOM4-201ENST00000289292 GRIA3P42263 894 aa15.63■□□□□ 0.09
SHROOM4-201ENST00000289292 RPL14P50914 215 aaKnown RBP15.63■□□□□ 0.09
SHROOM4-201ENST00000289292 LSM3P62310 102 aaKnown RBP15.63■□□□□ 0.09
SHROOM4-201ENST00000289292 FOLH1Q04609 750 aa15.63■□□□□ 0.09
SHROOM4-201ENST00000289292 CDH17Q12864 832 aa15.63■□□□□ 0.09
SHROOM4-201ENST00000289292 DDR2Q16832 855 aa15.63■□□□□ 0.09
SHROOM4-201ENST00000289292 RNF220Q5VTB9 566 aa15.63■□□□□ 0.09
SHROOM4-201ENST00000289292 ZFP1Q6P2D0 407 aa15.63■□□□□ 0.09
SHROOM4-201ENST00000289292 CCDC149Q6ZUS6 474 aa15.63■□□□□ 0.09
SHROOM4-201ENST00000289292 HDDC2Q7Z4H3 204 aa15.63■□□□□ 0.09
SHROOM4-201ENST00000289292 NECAB2Q7Z6G3 386 aa15.63■□□□□ 0.09
SHROOM4-201ENST00000289292 DEFB106AQ8N104 65 aa15.63■□□□□ 0.09
SHROOM4-201ENST00000289292 LPCAT1Q8NF37 534 aa15.63■□□□□ 0.09
SHROOM4-201ENST00000289292 PPP1R13LQ8WUF5 828 aa15.63■□□□□ 0.09
SHROOM4-201ENST00000289292 PLEKHG4BQ96PX9 1271 aa15.63■□□□□ 0.09
SHROOM4-201ENST00000289292 CHKBQ9Y259 395 aa15.63■□□□□ 0.09
SHROOM4-201ENST00000289292 SESN1Q9Y6P5 492 aa15.63■□□□□ 0.09
SHROOM4-201ENST00000289292 NUDT17P0C025 328 aa15.63■□□□□ 0.09
SHROOM4-201ENST00000289292 SNAPC2Q13487 334 aa15.63■□□□□ 0.09
SHROOM4-201ENST00000289292 KRR1Q13601 381 aaKnown RBP15.63■□□□□ 0.09
SHROOM4-201ENST00000289292 SWT1Q5T5J6 900 aaKnown RBP15.63■□□□□ 0.09
SHROOM4-201ENST00000289292 OMDQ99983 421 aa15.63■□□□□ 0.09
SHROOM4-201ENST00000289292 SEMA4BQ9NPR2 832 aaPredicted RBP15.63■□□□□ 0.09
SHROOM4-201ENST00000289292 ADCY6O43306 1168 aa15.63■□□□□ 0.09
SHROOM4-201ENST00000289292 ALDH1A1P00352 501 aa15.63■□□□□ 0.09
SHROOM4-201ENST00000289292 SCNN1BP51168 640 aa15.63■□□□□ 0.09
SHROOM4-201ENST00000289292 DGKKQ5KSL6 1271 aa15.63■□□□□ 0.09
SHROOM4-201ENST00000289292 ARMC4Q5T2S8 1044 aa15.63■□□□□ 0.09
SHROOM4-201ENST00000289292 ILDR2Q71H61 639 aa15.63■□□□□ 0.09
SHROOM4-201ENST00000289292 ULK2Q8IYT8 1036 aa15.63■□□□□ 0.09
SHROOM4-201ENST00000289292 BDH2Q9BUT1 245 aa15.63■□□□□ 0.09
SHROOM4-201ENST00000289292 SLC25A27O95847 323 aa15.63■□□□□ 0.09
SHROOM4-201ENST00000289292 THPOP40225 353 aa15.63■□□□□ 0.09
SHROOM4-201ENST00000289292 PERM1Q5SV97 790 aa15.63■□□□□ 0.09
SHROOM4-201ENST00000289292 ZNF618Q5T7W0 954 aa15.63■□□□□ 0.09
SHROOM4-201ENST00000289292 TNS4Q8IZW8 715 aa15.63■□□□□ 0.09
SHROOM4-201ENST00000289292 DHRSXQ8N5I4 330 aa15.63■□□□□ 0.09
SHROOM4-201ENST00000289292 VGLL2Q8N8G2 317 aa15.63■□□□□ 0.09
SHROOM4-201ENST00000289292 VPS33AQ96AX1 596 aa15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms