RNA–Protein interactions for RNA: ENST00000287936.8

HMGCR-201, Transcript of 3-hydroxy-3-methylglutaryl-CoA reductase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCR, Length 4,585 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCR-201ENST00000287936 CDYLQ9Y232 598 aa10.3□□□□□ -0.76
HMGCR-201ENST00000287936 SMIM28A0A1B0GU29 152 aa10.29□□□□□ -0.76
HMGCR-201ENST00000287936 EIF4E1BA6NMX2 242 aaKnown RBP10.29□□□□□ -0.76
HMGCR-201ENST00000287936 KCNK1O00180 336 aa10.29□□□□□ -0.76
HMGCR-201ENST00000287936 TRAFD1O14545 582 aaPredicted RBP10.29□□□□□ -0.76
HMGCR-201ENST00000287936 GIPC1O14908 333 aa10.29□□□□□ -0.76
HMGCR-201ENST00000287936 THP07101 528 aa10.29□□□□□ -0.76
HMGCR-201ENST00000287936 CSH1P0DML2 217 aa10.29□□□□□ -0.76
HMGCR-201ENST00000287936 CSH2P0DML3 217 aa10.29□□□□□ -0.76
HMGCR-201ENST00000287936 THRAP10827 490 aa10.29□□□□□ -0.76
HMGCR-201ENST00000287936 NRLP54845 237 aa10.29□□□□□ -0.76
HMGCR-201ENST00000287936 CSE1LP55060 971 aaKnown RBP10.29□□□□□ -0.76
HMGCR-201ENST00000287936 ABCE1P61221 599 aaKnown RBP10.29□□□□□ -0.76
HMGCR-201ENST00000287936 KCNMB4Q86W47 210 aa10.29□□□□□ -0.76
HMGCR-201ENST00000287936 CALML6Q8TD86 181 aa10.29□□□□□ -0.76
HMGCR-201ENST00000287936 LRRN4Q8WUT4 740 aa10.29□□□□□ -0.76
HMGCR-201ENST00000287936 FAM193BQ96PV7 902 aaPredicted RBP10.29□□□□□ -0.76
HMGCR-201ENST00000287936 ARHGEF4Q9NR80 690 aa10.29□□□□□ -0.76
HMGCR-201ENST00000287936 MKS1Q9NXB0 559 aa10.29□□□□□ -0.76
HMGCR-201ENST00000287936 SEC23IPQ9Y6Y8 1000 aaKnown RBP10.29□□□□□ -0.76
HMGCR-201ENST00000287936 A0A096LPK6 155 aa10.29□□□□□ -0.76
HMGCR-201ENST00000287936 E2F8A0AVK6 867 aa10.29□□□□□ -0.76
HMGCR-201ENST00000287936 MFSD11O43934 449 aa10.29□□□□□ -0.76
HMGCR-201ENST00000287936 PEX11AO75192 247 aa10.29□□□□□ -0.76
HMGCR-201ENST00000287936 METTL18O95568 372 aa10.29□□□□□ -0.76
HMGCR-201ENST00000287936 IL1BP01584 269 aa10.29□□□□□ -0.76
HMGCR-201ENST00000287936 LTFP02788 710 aa10.29□□□□□ -0.76
HMGCR-201ENST00000287936 MLH1P40692 756 aa10.29□□□□□ -0.76
HMGCR-201ENST00000287936 ANKRD20A4Q4UJ75 823 aa10.29□□□□□ -0.76
HMGCR-201ENST00000287936 RABGAP1LQ5R372 815 aa10.29□□□□□ -0.76
HMGCR-201ENST00000287936 CCDC185Q8N715 623 aa10.29□□□□□ -0.76
HMGCR-201ENST00000287936 TSPAN17Q96FV3 270 aa10.29□□□□□ -0.76
HMGCR-201ENST00000287936 OLFM3Q96PB7 478 aa10.29□□□□□ -0.76
HMGCR-201ENST00000287936 LBHD1Q9BQE6 289 aaPredicted RBP10.29□□□□□ -0.76
HMGCR-201ENST00000287936 SYBUQ9NX95 663 aa10.29□□□□□ -0.76
HMGCR-201ENST00000287936 DTLQ9NZJ0 730 aa10.29□□□□□ -0.76
HMGCR-201ENST00000287936 JCHAINP01591 159 aa10.29□□□□□ -0.76
HMGCR-201ENST00000287936 TPBGLP0DKB5 382 aa10.29□□□□□ -0.76
HMGCR-201ENST00000287936 ERVK-10P10266 1014 aa10.29□□□□□ -0.76
HMGCR-201ENST00000287936 TAF2Q6P1X5 1199 aa10.29□□□□□ -0.76
HMGCR-201ENST00000287936 GPR142Q7Z601 462 aa10.29□□□□□ -0.76
HMGCR-201ENST00000287936 TLK2Q86UE8 772 aa10.29□□□□□ -0.76
HMGCR-201ENST00000287936 FAM228AQ86W67 206 aa10.29□□□□□ -0.76
HMGCR-201ENST00000287936 ICA1LQ8NDH6 482 aa10.29□□□□□ -0.76
HMGCR-201ENST00000287936 SMARCD1Q96GM5 515 aa10.29□□□□□ -0.76
HMGCR-201ENST00000287936 HNRNPABQ99729 332 aaKnown RBP10.29□□□□□ -0.76
HMGCR-201ENST00000287936 EFHD1Q9BUP0 239 aa10.29□□□□□ -0.76
HMGCR-201ENST00000287936 IL22Q9GZX6 179 aa10.29□□□□□ -0.76
HMGCR-201ENST00000287936 CCDC68Q9H2F9 335 aa10.29□□□□□ -0.76
HMGCR-201ENST00000287936 DPEP3Q9H4B8 488 aa10.29□□□□□ -0.76
HMGCR-201ENST00000287936 EML4Q9HC35 981 aaKnown RBP10.29□□□□□ -0.76
HMGCR-201ENST00000287936 DLGAP2Q9P1A6 1054 aa10.29□□□□□ -0.76
HMGCR-201ENST00000287936 FZD10Q9ULW2 581 aa10.29□□□□□ -0.76
HMGCR-201ENST00000287936 DOCK1Q14185 1865 aa10.29□□□□□ -0.76
HMGCR-201ENST00000287936 TMEM114B3SHH9 223 aa10.29□□□□□ -0.76
HMGCR-201ENST00000287936 F8W8V4 182 aa10.29□□□□□ -0.76
HMGCR-201ENST00000287936 PFDN6O15212 129 aa10.29□□□□□ -0.76
HMGCR-201ENST00000287936 CNMDO75829 334 aa10.29□□□□□ -0.76
HMGCR-201ENST00000287936 KRT36O76013 467 aa10.29□□□□□ -0.76
HMGCR-201ENST00000287936 ENDOD1O94919 500 aa10.29□□□□□ -0.76
HMGCR-201ENST00000287936 RPLP2P05387 115 aaKnown RBP10.29□□□□□ -0.76
HMGCR-201ENST00000287936 CRADDP78560 199 aa10.29□□□□□ -0.76
HMGCR-201ENST00000287936 STXBP5Q5T5C0 1151 aa10.29□□□□□ -0.76
HMGCR-201ENST00000287936 SPATA2LQ8IUW3 424 aaPredicted RBP10.29□□□□□ -0.76
HMGCR-201ENST00000287936 MAB21L3Q8N8X9 362 aa10.29□□□□□ -0.76
HMGCR-201ENST00000287936 IPMKQ8NFU5 416 aa10.29□□□□□ -0.76
HMGCR-201ENST00000287936 OR52K1Q8NGK4 314 aa10.29□□□□□ -0.76
HMGCR-201ENST00000287936 AGR3Q8TD06 166 aa10.29□□□□□ -0.76
HMGCR-201ENST00000287936 EIF2AQ9BY44 585 aaKnown RBP10.29□□□□□ -0.76
HMGCR-201ENST00000287936 UBE2OQ9C0C9 1292 aaKnown RBP10.29□□□□□ -0.76
HMGCR-201ENST00000287936 VCX3AQ9NNX9 186 aa10.29□□□□□ -0.76
HMGCR-201ENST00000287936 PIH1D1Q9NWS0 290 aaKnown RBP10.29□□□□□ -0.76
HMGCR-201ENST00000287936 DNAJC25-GNG10A0A024R161 153 aa10.28□□□□□ -0.76
HMGCR-201ENST00000287936 ZBTB42B2RXF5 422 aa10.28□□□□□ -0.76
HMGCR-201ENST00000287936 CYP2C18P33260 490 aa10.28□□□□□ -0.76
HMGCR-201ENST00000287936 RPS6KA2Q15349 733 aa10.28□□□□□ -0.76
HMGCR-201ENST00000287936 SOWAHAQ2M3V2 549 aa10.28□□□□□ -0.76
HMGCR-201ENST00000287936 WSCD1Q658N2 575 aa10.28□□□□□ -0.76
HMGCR-201ENST00000287936 TIGD7Q6NT04 549 aaPredicted RBP10.28□□□□□ -0.76
HMGCR-201ENST00000287936 TIFABQ6ZNK6 161 aa10.28□□□□□ -0.76
HMGCR-201ENST00000287936 TDRD5Q8NAT2 981 aaKnown RBP10.28□□□□□ -0.76
HMGCR-201ENST00000287936 SENP8Q96LD8 212 aa10.28□□□□□ -0.76
HMGCR-201ENST00000287936 PFDN4Q9NQP4 134 aa10.28□□□□□ -0.76
HMGCR-201ENST00000287936 CNGB3Q9NQW8 809 aa10.28□□□□□ -0.76
HMGCR-201ENST00000287936 PTCH2Q9Y6C5 1203 aa10.28□□□□□ -0.76
HMGCR-201ENST00000287936 LOC100653049A0A140TA62 436 aa10.28□□□□□ -0.76
HMGCR-201ENST00000287936 KRT34O76011 436 aa10.28□□□□□ -0.76
HMGCR-201ENST00000287936 ERCC2P18074 760 aa10.28□□□□□ -0.76
HMGCR-201ENST00000287936 WARSP23381 471 aaKnown RBP10.28□□□□□ -0.76
HMGCR-201ENST00000287936 CCNFP41002 786 aa10.28□□□□□ -0.76
HMGCR-201ENST00000287936 GLUD2P49448 558 aa10.28□□□□□ -0.76
HMGCR-201ENST00000287936 CRYBB1P53674 252 aaPredicted RBP10.28□□□□□ -0.76
HMGCR-201ENST00000287936 MED21Q13503 144 aa10.28□□□□□ -0.76
HMGCR-201ENST00000287936 INTS6LQ5JSJ4 861 aaKnown RBP10.28□□□□□ -0.76
HMGCR-201ENST00000287936 RARS2Q5T160 578 aaKnown RBP10.28□□□□□ -0.76
HMGCR-201ENST00000287936 SEL1L3Q68CR1 1132 aa10.28□□□□□ -0.76
HMGCR-201ENST00000287936 TRMT10BQ6PF06 316 aaKnown RBP10.28□□□□□ -0.76
HMGCR-201ENST00000287936 SCN4BQ8IWT1 228 aa10.28□□□□□ -0.76
HMGCR-201ENST00000287936 ELMO2Q96JJ3 720 aa10.28□□□□□ -0.76
HMGCR-201ENST00000287936 ARHGEF38Q9NXL2 777 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 126.1 ms