RNA–Protein interactions for RNA: ENST00000275036.11

HMGN3-201, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

TSL 1 (best) BASIC

Gene HMGN3, Length 831 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-201ENST00000275036 EVLQ9UI08 416 aaPredicted RBP14.94□□□□□ -0.02
HMGN3-201ENST00000275036 INTS6Q9UL03 887 aaKnown RBP14.94□□□□□ -0.02
HMGN3-201ENST00000275036 CEP83Q9Y592 693 aa14.94□□□□□ -0.02
HMGN3-201ENST00000275036 TIMM44O43615 452 aa14.93□□□□□ -0.02
HMGN3-201ENST00000275036 ZNF217O75362 1048 aa14.93□□□□□ -0.02
HMGN3-201ENST00000275036 EPHX1P07099 455 aa14.93□□□□□ -0.02
HMGN3-201ENST00000275036 TPM2P07951 284 aa14.93□□□□□ -0.02
HMGN3-201ENST00000275036 KCNA4P22459 653 aa14.93□□□□□ -0.02
HMGN3-201ENST00000275036 NOS2P35228 1153 aa14.93□□□□□ -0.02
HMGN3-201ENST00000275036 SOX5P35711 763 aa14.93□□□□□ -0.02
HMGN3-201ENST00000275036 NOMO3P69849 1222 aa14.93□□□□□ -0.02
HMGN3-201ENST00000275036 ZNF33AQ06730 810 aa14.93□□□□□ -0.02
HMGN3-201ENST00000275036 STARD3Q14849 445 aa14.93□□□□□ -0.02
HMGN3-201ENST00000275036 TRNP1Q6NT89 227 aa14.93□□□□□ -0.02
HMGN3-201ENST00000275036 CAVIN1Q6NZI2 390 aaKnown RBP14.93□□□□□ -0.02
HMGN3-201ENST00000275036 SERPINA13PQ6UXR4 307 aa14.93□□□□□ -0.02
HMGN3-201ENST00000275036 SLC36A4Q6YBV0 504 aa14.93□□□□□ -0.02
HMGN3-201ENST00000275036 CHSY1Q86X52 802 aa14.93□□□□□ -0.02
HMGN3-201ENST00000275036 ZDHHC17Q8IUH5 632 aa14.93□□□□□ -0.02
HMGN3-201ENST00000275036 CARNMT1Q8N4J0 409 aa14.93□□□□□ -0.02
HMGN3-201ENST00000275036 ATP6V0D2Q8N8Y2 350 aa14.93□□□□□ -0.02
HMGN3-201ENST00000275036 CPA5Q8WXQ8 436 aa14.93□□□□□ -0.02
HMGN3-201ENST00000275036 C18orf8Q96DM3 657 aa14.93□□□□□ -0.02
HMGN3-201ENST00000275036 MYO19Q96H55 970 aa14.93□□□□□ -0.02
HMGN3-201ENST00000275036 HSPA12BQ96MM6 686 aa14.93□□□□□ -0.02
HMGN3-201ENST00000275036 PRDM16Q9HAZ2 1276 aa14.93□□□□□ -0.02
HMGN3-201ENST00000275036 ANLNQ9NQW6 1124 aa14.93□□□□□ -0.02
HMGN3-201ENST00000275036 KNL1Q8NG31 2342 aa14.93□□□□□ -0.02
HMGN3-201ENST00000275036 I6L893 689 aaPredicted RBP14.92□□□□□ -0.02
HMGN3-201ENST00000275036 GIPC1O14908 333 aa14.92□□□□□ -0.02
HMGN3-201ENST00000275036 LUC7L3O95232 432 aaKnown RBP14.92□□□□□ -0.02
HMGN3-201ENST00000275036 KCNK5O95279 499 aa14.92□□□□□ -0.02
HMGN3-201ENST00000275036 LSM8O95777 96 aaKnown RBP14.92□□□□□ -0.02
HMGN3-201ENST00000275036 ENGP17813 658 aa14.92□□□□□ -0.02
HMGN3-201ENST00000275036 CDK11BP21127 795 aaKnown RBP14.92□□□□□ -0.02
HMGN3-201ENST00000275036 MATKP42679 507 aa14.92□□□□□ -0.02
HMGN3-201ENST00000275036 IRAK1P51617 712 aa14.92□□□□□ -0.02
HMGN3-201ENST00000275036 SNX16P57768 344 aa14.92□□□□□ -0.02
HMGN3-201ENST00000275036 RNASE9P60153 205 aaKnown RBP14.92□□□□□ -0.02
HMGN3-201ENST00000275036 FMO1Q01740 532 aa14.92□□□□□ -0.02
HMGN3-201ENST00000275036 CDR2Q01850 454 aa14.92□□□□□ -0.02
HMGN3-201ENST00000275036 ARID5AQ03989 594 aa14.92□□□□□ -0.02
HMGN3-201ENST00000275036 UBXN1Q04323 297 aa14.92□□□□□ -0.02
HMGN3-201ENST00000275036 NME3Q13232 169 aa14.92□□□□□ -0.02
HMGN3-201ENST00000275036 FNDC3BQ53EP0 1204 aaKnown RBP14.92□□□□□ -0.02
HMGN3-201ENST00000275036 N4BP2L1Q5TBK1 243 aaPredicted RBP14.92□□□□□ -0.02
HMGN3-201ENST00000275036 NAA35Q5VZE5 725 aa14.92□□□□□ -0.02
HMGN3-201ENST00000275036 SLC23A3Q6PIS1 610 aa14.92□□□□□ -0.02
HMGN3-201ENST00000275036 METTL3Q86U44 580 aaKnown RBP14.92□□□□□ -0.02
HMGN3-201ENST00000275036 ERICH1Q86X53 443 aa14.92□□□□□ -0.02
HMGN3-201ENST00000275036 CIR1Q86X95 450 aaPredicted RBP14.92□□□□□ -0.02
HMGN3-201ENST00000275036 TMPRSS6Q8IU80 811 aa14.92□□□□□ -0.02
HMGN3-201ENST00000275036 DHX40Q8IX18 779 aaKnown RBP14.92□□□□□ -0.02
HMGN3-201ENST00000275036 NT5C3BQ969T7 300 aa14.92□□□□□ -0.02
HMGN3-201ENST00000275036 TTC17Q96AE7 1141 aa14.92□□□□□ -0.02
HMGN3-201ENST00000275036 ZNF419Q96HQ0 510 aaPredicted RBP14.92□□□□□ -0.02
HMGN3-201ENST00000275036 ERGIC2Q96RQ1 377 aa14.92□□□□□ -0.02
HMGN3-201ENST00000275036 NPY6RQ99463 290 aa14.92□□□□□ -0.02
HMGN3-201ENST00000275036 MTG2Q9H4K7 406 aa14.92□□□□□ -0.02
HMGN3-201ENST00000275036 ITM2CQ9NQX7 267 aa14.92□□□□□ -0.02
HMGN3-201ENST00000275036 PIGVQ9NUD9 493 aa14.92□□□□□ -0.02
HMGN3-201ENST00000275036 WSB2Q9NYS7 404 aaPredicted RBP14.92□□□□□ -0.02
HMGN3-201ENST00000275036 TYW5A2RUC4 315 aaKnown RBP14.91□□□□□ -0.02
HMGN3-201ENST00000275036 M0QYT0 321 aa14.91□□□□□ -0.02
HMGN3-201ENST00000275036 TEX33O43247 280 aa14.91□□□□□ -0.02
HMGN3-201ENST00000275036 SYNCRIPO60506 623 aaKnown RBP14.91□□□□□ -0.02
HMGN3-201ENST00000275036 CYP1A1P04798 512 aaPredicted RBP14.91□□□□□ -0.02
HMGN3-201ENST00000275036 DLDP09622 509 aaKnown RBP14.91□□□□□ -0.02
HMGN3-201ENST00000275036 POLR2EP19388 210 aaKnown RBP14.91□□□□□ -0.02
HMGN3-201ENST00000275036 MAOBP27338 520 aa14.91□□□□□ -0.02
HMGN3-201ENST00000275036 CD6P30203 668 aa14.91□□□□□ -0.02
HMGN3-201ENST00000275036 CCR1P32246 355 aa14.91□□□□□ -0.02
HMGN3-201ENST00000275036 FLT3P36888 993 aa14.91□□□□□ -0.02
HMGN3-201ENST00000275036 SCNN1AP37088 669 aa14.91□□□□□ -0.02
HMGN3-201ENST00000275036 GGCXP38435 758 aa14.91□□□□□ -0.02
HMGN3-201ENST00000275036 CSKP41240 450 aa14.91□□□□□ -0.02
HMGN3-201ENST00000275036 CTSOP43234 321 aaPredicted RBP14.91□□□□□ -0.02
HMGN3-201ENST00000275036 TPMTP51580 245 aa14.91□□□□□ -0.02
HMGN3-201ENST00000275036 CAMK2GQ13555 558 aaPredicted RBP14.91□□□□□ -0.02
HMGN3-201ENST00000275036 FAM102AQ5T9C2 384 aaPredicted RBP14.91□□□□□ -0.02
HMGN3-201ENST00000275036 FBXL22Q6P050 247 aa14.91□□□□□ -0.02
HMGN3-201ENST00000275036 ZNF677Q86XU0 584 aa14.91□□□□□ -0.02
HMGN3-201ENST00000275036 ANKRD20A12PQ8NF67 263 aa14.91□□□□□ -0.02
HMGN3-201ENST00000275036 RNF34Q969K3 372 aa14.91□□□□□ -0.02
HMGN3-201ENST00000275036 IGSF8Q969P0 613 aa14.91□□□□□ -0.02
HMGN3-201ENST00000275036 TOE1Q96GM8 510 aaKnown RBP14.91□□□□□ -0.02
HMGN3-201ENST00000275036 MRGPRX3Q96LB0 322 aa14.91□□□□□ -0.02
HMGN3-201ENST00000275036 SPAG5Q96R06 1193 aa14.91□□□□□ -0.02
HMGN3-201ENST00000275036 TBCBQ99426 244 aa14.91□□□□□ -0.02
HMGN3-201ENST00000275036 BPIFA3Q9BQP9 254 aa14.91□□□□□ -0.02
HMGN3-201ENST00000275036 FUCA2Q9BTY2 467 aa14.91□□□□□ -0.02
HMGN3-201ENST00000275036 CAPN10Q9HC96 672 aa14.91□□□□□ -0.02
HMGN3-201ENST00000275036 TMEM9BQ9NQ34 198 aa14.91□□□□□ -0.02
HMGN3-201ENST00000275036 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP14.91□□□□□ -0.02
HMGN3-201ENST00000275036 F5H5T6 163 aa14.9□□□□□ -0.02
HMGN3-201ENST00000275036 H0Y626 953 aa14.9□□□□□ -0.02
HMGN3-201ENST00000275036 GOLGA8SH3BPF8 625 aa14.9□□□□□ -0.02
HMGN3-201ENST00000275036 ZBTB24O43167 697 aaPredicted RBP14.9□□□□□ -0.02
HMGN3-201ENST00000275036 PAGE1O75459 146 aa14.9□□□□□ -0.02
HMGN3-201ENST00000275036 ADCY5O95622 1261 aa14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms