RNA–Protein interactions for RNA: ENST00000270349.11

SLC6A3-201, Transcript of solute carrier family 6 member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC6A3, Length 3,936 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A3-201ENST00000270349 ZBED2Q9BTP6 218 aa12.11□□□□□ -0.47
SLC6A3-201ENST00000270349 CSNK1G1Q9HCP0 422 aa12.11□□□□□ -0.47
SLC6A3-201ENST00000270349 PNPLA8Q9NP80 782 aa12.11□□□□□ -0.47
SLC6A3-201ENST00000270349 MARCH2Q9P0N8 246 aa12.11□□□□□ -0.47
SLC6A3-201ENST00000270349 TTC3P53804 2025 aa12.11□□□□□ -0.47
SLC6A3-201ENST00000270349 C5orf60A6NFR6 353 aa12.1□□□□□ -0.47
SLC6A3-201ENST00000270349 ZNF487B1APH4 448 aa12.1□□□□□ -0.47
SLC6A3-201ENST00000270349 TCP11X1B4DZS4 312 aa12.1□□□□□ -0.47
SLC6A3-201ENST00000270349 GCATO75600 419 aa12.1□□□□□ -0.47
SLC6A3-201ENST00000270349 FAM107AO95990 144 aa12.1□□□□□ -0.47
SLC6A3-201ENST00000270349 RAG1P15918 1043 aa12.1□□□□□ -0.47
SLC6A3-201ENST00000270349 CXCR3P49682 368 aa12.1□□□□□ -0.47
SLC6A3-201ENST00000270349 FAM47EQ6ZV65 393 aa12.1□□□□□ -0.47
SLC6A3-201ENST00000270349 LRRC6Q86X45 466 aa12.1□□□□□ -0.47
SLC6A3-201ENST00000270349 ATP6V0D2Q8N8Y2 350 aa12.1□□□□□ -0.47
SLC6A3-201ENST00000270349 SPPL2BQ8TCT7 592 aa12.1□□□□□ -0.47
SLC6A3-201ENST00000270349 LRRC8CQ8TDW0 803 aa12.1□□□□□ -0.47
SLC6A3-201ENST00000270349 PABPC5Q96DU9 382 aaKnown RBP12.1□□□□□ -0.47
SLC6A3-201ENST00000270349 C11orf84Q9BUA3 381 aaPredicted RBP12.1□□□□□ -0.47
SLC6A3-201ENST00000270349 ZCWPW1Q9H0M4 648 aa12.1□□□□□ -0.47
SLC6A3-201ENST00000270349 ELAC1Q9H777 363 aaKnown RBP12.1□□□□□ -0.47
SLC6A3-201ENST00000270349 MPP6Q9NZW5 540 aa12.1□□□□□ -0.47
SLC6A3-201ENST00000270349 PRRG1O14668 218 aa12.1□□□□□ -0.47
SLC6A3-201ENST00000270349 OAZ2O95190 189 aa12.1□□□□□ -0.47
SLC6A3-201ENST00000270349 VAV1P15498 845 aa12.1□□□□□ -0.47
SLC6A3-201ENST00000270349 FAM189BP81408 668 aa12.1□□□□□ -0.47
SLC6A3-201ENST00000270349 KCNJ11Q14654 390 aa12.1□□□□□ -0.47
SLC6A3-201ENST00000270349 PSMD5Q16401 504 aa12.1□□□□□ -0.47
SLC6A3-201ENST00000270349 USP41Q3LFD5 358 aa12.1□□□□□ -0.47
SLC6A3-201ENST00000270349 BRMS1LQ5PSV4 323 aa12.1□□□□□ -0.47
SLC6A3-201ENST00000270349 TP53INP2Q8IXH6 220 aa12.1□□□□□ -0.47
SLC6A3-201ENST00000270349 TTC9BQ8N6N2 239 aa12.1□□□□□ -0.47
SLC6A3-201ENST00000270349 PPP1R14CQ8TAE6 165 aa12.1□□□□□ -0.47
SLC6A3-201ENST00000270349 RPRD1AQ96P16 312 aaPredicted RBP12.1□□□□□ -0.47
SLC6A3-201ENST00000270349 KIF9Q9HAQ2 790 aa12.1□□□□□ -0.47
SLC6A3-201ENST00000270349 SP110Q9HB58 689 aa12.1□□□□□ -0.47
SLC6A3-201ENST00000270349 CYP4F11Q9HBI6 524 aa12.1□□□□□ -0.47
SLC6A3-201ENST00000270349 WDR6Q9NNW5 1121 aaKnown RBP12.1□□□□□ -0.47
SLC6A3-201ENST00000270349 NUP205Q92621 2012 aa12.1□□□□□ -0.47
SLC6A3-201ENST00000270349 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.1□□□□□ -0.47
SLC6A3-201ENST00000270349 HHLA1C9JL84 531 aa12.1□□□□□ -0.47
SLC6A3-201ENST00000270349 GALTP07902 379 aa12.1□□□□□ -0.47
SLC6A3-201ENST00000270349 MGAT1P26572 445 aa12.1□□□□□ -0.47
SLC6A3-201ENST00000270349 ZNF135P52742 658 aaPredicted RBP12.1□□□□□ -0.47
SLC6A3-201ENST00000270349 PDE1BQ01064 536 aa12.1□□□□□ -0.47
SLC6A3-201ENST00000270349 TGS1Q96RS0 853 aaKnown RBP12.1□□□□□ -0.47
SLC6A3-201ENST00000270349 ACSS3Q9H6R3 686 aa12.1□□□□□ -0.47
SLC6A3-201ENST00000270349 NMUR1Q9HB89 426 aa12.1□□□□□ -0.47
SLC6A3-201ENST00000270349 CEP350Q5VT06 3117 aa12.1□□□□□ -0.47
SLC6A3-201ENST00000270349 TCRBV9S1A1TA0A576 114 aa12.09□□□□□ -0.47
SLC6A3-201ENST00000270349 WDR27A2RRH5 827 aa12.09□□□□□ -0.47
SLC6A3-201ENST00000270349 SDR42E2A6NKP2 422 aa12.09□□□□□ -0.47
SLC6A3-201ENST00000270349 KRT38O76015 456 aa12.09□□□□□ -0.47
SLC6A3-201ENST00000270349 TBX18O95935 607 aa12.09□□□□□ -0.47
SLC6A3-201ENST00000270349 VEPH1Q14D04 833 aa12.09□□□□□ -0.47
SLC6A3-201ENST00000270349 PARP6Q2NL67 630 aa12.09□□□□□ -0.47
SLC6A3-201ENST00000270349 SLC43A3Q8NBI5 491 aa12.09□□□□□ -0.47
SLC6A3-201ENST00000270349 YME1L1Q96TA2 773 aa12.09□□□□□ -0.47
SLC6A3-201ENST00000270349 FSD1LQ9BXM9 530 aa12.09□□□□□ -0.47
SLC6A3-201ENST00000270349 SAGE1Q9NXZ1 904 aa12.09□□□□□ -0.47
SLC6A3-201ENST00000270349 DONSONQ9NYP3 566 aa12.09□□□□□ -0.47
SLC6A3-201ENST00000270349 CORO7P57737 925 aa12.09□□□□□ -0.47
SLC6A3-201ENST00000270349 OTUD1Q5VV17 481 aaPredicted RBP12.09□□□□□ -0.47
SLC6A3-201ENST00000270349 PM20D1Q6GTS8 502 aa12.09□□□□□ -0.47
SLC6A3-201ENST00000270349 CD300LGQ6UXG3 332 aa12.09□□□□□ -0.47
SLC6A3-201ENST00000270349 SLC39A5Q6ZMH5 540 aa12.09□□□□□ -0.47
SLC6A3-201ENST00000270349 ZNF567Q8N184 647 aa12.09□□□□□ -0.47
SLC6A3-201ENST00000270349 CCDC197Q8NCU1 140 aa12.09□□□□□ -0.47
SLC6A3-201ENST00000270349 IPMKQ8NFU5 416 aa12.09□□□□□ -0.47
SLC6A3-201ENST00000270349 TET1Q8NFU7 2136 aa12.09□□□□□ -0.47
SLC6A3-201ENST00000270349 CLUHO75153 1309 aa12.09□□□□□ -0.47
SLC6A3-201ENST00000270349 ZNF189O75820 626 aaPredicted RBP12.09□□□□□ -0.47
SLC6A3-201ENST00000270349 GRIA1P42261 906 aa12.09□□□□□ -0.47
SLC6A3-201ENST00000270349 ALDH1A3P47895 512 aa12.09□□□□□ -0.47
SLC6A3-201ENST00000270349 GPX6P59796 221 aa12.09□□□□□ -0.47
SLC6A3-201ENST00000270349 SEPT6Q14141 434 aa12.09□□□□□ -0.47
SLC6A3-201ENST00000270349 RTP2Q5QGT7 225 aa12.09□□□□□ -0.47
SLC6A3-201ENST00000270349 CCDC91Q7Z6B0 441 aa12.09□□□□□ -0.47
SLC6A3-201ENST00000270349 RELL1Q8IUW5 271 aa12.09□□□□□ -0.47
SLC6A3-201ENST00000270349 LRRC34Q8IZ02 419 aa12.09□□□□□ -0.47
SLC6A3-201ENST00000270349 CASD1Q96PB1 797 aa12.09□□□□□ -0.47
SLC6A3-201ENST00000270349 PRKAG2Q9UGJ0 569 aa12.09□□□□□ -0.47
SLC6A3-201ENST00000270349 SMG5Q9UPR3 1016 aaKnown RBP12.09□□□□□ -0.47
SLC6A3-201ENST00000270349 TRIM49D1C9J1S8 452 aa12.08□□□□□ -0.47
SLC6A3-201ENST00000270349 COPEO14579 308 aa12.08□□□□□ -0.47
SLC6A3-201ENST00000270349 LPXNO60711 386 aa12.08□□□□□ -0.47
SLC6A3-201ENST00000270349 IRF1P10914 325 aa12.08□□□□□ -0.47
SLC6A3-201ENST00000270349 CES3Q6UWW8 571 aa12.08□□□□□ -0.47
SLC6A3-201ENST00000270349 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.08□□□□□ -0.47
SLC6A3-201ENST00000270349 NT5C3BQ969T7 300 aa12.08□□□□□ -0.47
SLC6A3-201ENST00000270349 THOC1Q96FV9 657 aaKnown RBP12.08□□□□□ -0.47
SLC6A3-201ENST00000270349 SLC13A1Q9BZW2 595 aa12.08□□□□□ -0.47
SLC6A3-201ENST00000270349 RPS6KL1Q9Y6S9 549 aa12.08□□□□□ -0.47
SLC6A3-201ENST00000270349 TMEM189-UBE2V1I3L0A0 370 aa12.08□□□□□ -0.48
SLC6A3-201ENST00000270349 PARNO95453 639 aaKnown RBP12.08□□□□□ -0.48
SLC6A3-201ENST00000270349 NFKB1P19838 968 aa12.08□□□□□ -0.48
SLC6A3-201ENST00000270349 SAT1P21673 171 aa12.08□□□□□ -0.48
SLC6A3-201ENST00000270349 RAP1GAP2Q684P5 730 aa12.08□□□□□ -0.48
SLC6A3-201ENST00000270349 TRAF7Q6Q0C0 670 aa12.08□□□□□ -0.48
SLC6A3-201ENST00000270349 RNF19BQ6ZMZ0 732 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms