RNA–Protein interactions for RNA: ENST00000267199.8

VPS33A-201, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS33A, Length 4,586 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-201ENST00000267199 C2orf69Q8N8R5 385 aa11.81□□□□□ -0.52
VPS33A-201ENST00000267199 CASS4Q9NQ75 786 aa11.81□□□□□ -0.52
VPS33A-201ENST00000267199 PDE4DIPQ5VU43 2346 aa11.81□□□□□ -0.52
VPS33A-201ENST00000267199 UMODL1Q5DID0 1318 aa11.81□□□□□ -0.52
VPS33A-201ENST00000267199 C5P01031 1676 aa11.81□□□□□ -0.52
VPS33A-201ENST00000267199 MRASO14807 208 aa11.81□□□□□ -0.52
VPS33A-201ENST00000267199 HMBSP08397 361 aa11.81□□□□□ -0.52
VPS33A-201ENST00000267199 FASP25445 335 aa11.81□□□□□ -0.52
VPS33A-201ENST00000267199 NR1H2P55055 460 aa11.81□□□□□ -0.52
VPS33A-201ENST00000267199 FAM182AQ5T1J6 154 aa11.81□□□□□ -0.52
VPS33A-201ENST00000267199 ZFP1Q6P2D0 407 aa11.81□□□□□ -0.52
VPS33A-201ENST00000267199 DHFR2Q86XF0 187 aa11.81□□□□□ -0.52
VPS33A-201ENST00000267199 JOSD2Q8TAC2 188 aa11.81□□□□□ -0.52
VPS33A-201ENST00000267199 ACSS2Q9NR19 701 aa11.81□□□□□ -0.52
VPS33A-201ENST00000267199 PNPOQ9NVS9 261 aa11.81□□□□□ -0.52
VPS33A-201ENST00000267199 GPRC5DQ9NZD1 345 aa11.81□□□□□ -0.52
VPS33A-201ENST00000267199 RRN3P2A6NIE6 340 aa11.81□□□□□ -0.52
VPS33A-201ENST00000267199 PTGES3LE9PB15 166 aa11.81□□□□□ -0.52
VPS33A-201ENST00000267199 H0YGN5 161 aa11.81□□□□□ -0.52
VPS33A-201ENST00000267199 WDR47O94967 919 aa11.81□□□□□ -0.52
VPS33A-201ENST00000267199 NFICP08651 508 aa11.81□□□□□ -0.52
VPS33A-201ENST00000267199 EPHA3P29320 983 aa11.81□□□□□ -0.52
VPS33A-201ENST00000267199 BST2Q10589 180 aaKnown RBP11.81□□□□□ -0.52
VPS33A-201ENST00000267199 PRKAA1Q13131 559 aa11.81□□□□□ -0.52
VPS33A-201ENST00000267199 FBXO47Q5MNV8 452 aa11.81□□□□□ -0.52
VPS33A-201ENST00000267199 PERM1Q5SV97 790 aa11.81□□□□□ -0.52
VPS33A-201ENST00000267199 ERO1BQ86YB8 467 aa11.81□□□□□ -0.52
VPS33A-201ENST00000267199 P3H2Q8IVL5 708 aa11.81□□□□□ -0.52
VPS33A-201ENST00000267199 GIPC3Q8TF64 312 aa11.81□□□□□ -0.52
VPS33A-201ENST00000267199 SLC16A10Q8TF71 515 aa11.81□□□□□ -0.52
VPS33A-201ENST00000267199 HTR3CQ8WXA8 447 aa11.81□□□□□ -0.52
VPS33A-201ENST00000267199 TSPAN17Q96FV3 270 aa11.81□□□□□ -0.52
VPS33A-201ENST00000267199 MTFR1LQ9H019 292 aa11.81□□□□□ -0.52
VPS33A-201ENST00000267199 COG4Q9H9E3 785 aa11.81□□□□□ -0.52
VPS33A-201ENST00000267199 NFS1Q9Y697 457 aa11.81□□□□□ -0.52
VPS33A-201ENST00000267199 NCF1BA6NI72 391 aaPredicted RBP11.8□□□□□ -0.52
VPS33A-201ENST00000267199 ZNF839A8K0R7 811 aa11.8□□□□□ -0.52
VPS33A-201ENST00000267199 NCF1CA8MVU1 366 aaPredicted RBP11.8□□□□□ -0.52
VPS33A-201ENST00000267199 ZSCAN9O15535 394 aaPredicted RBP11.8□□□□□ -0.52
VPS33A-201ENST00000267199 PYGLP06737 847 aa11.8□□□□□ -0.52
VPS33A-201ENST00000267199 NCF1P14598 390 aaPredicted RBP11.8□□□□□ -0.52
VPS33A-201ENST00000267199 VCLP18206 1134 aa11.8□□□□□ -0.52
VPS33A-201ENST00000267199 HLA-DPA1P20036 260 aa11.8□□□□□ -0.52
VPS33A-201ENST00000267199 PEX2P28328 305 aa11.8□□□□□ -0.52
VPS33A-201ENST00000267199 HOXD13P35453 343 aa11.8□□□□□ -0.52
VPS33A-201ENST00000267199 ETFBP38117 255 aa11.8□□□□□ -0.52
VPS33A-201ENST00000267199 SCNN1BP51168 640 aa11.8□□□□□ -0.52
VPS33A-201ENST00000267199 ACVR2BQ13705 512 aa11.8□□□□□ -0.52
VPS33A-201ENST00000267199 FASTKQ14296 549 aaKnown RBP11.8□□□□□ -0.52
VPS33A-201ENST00000267199 TMEM132BQ14DG7 1078 aa11.8□□□□□ -0.52
VPS33A-201ENST00000267199 DCAF12L1Q5VU92 463 aa11.8□□□□□ -0.52
VPS33A-201ENST00000267199 EEF1DP3Q658K8 133 aa11.8□□□□□ -0.52
VPS33A-201ENST00000267199 TRAF7Q6Q0C0 670 aa11.8□□□□□ -0.52
VPS33A-201ENST00000267199 NOL6Q9H6R4 1146 aaKnown RBP11.8□□□□□ -0.52
VPS33A-201ENST00000267199 NSMCE4AQ9NXX6 385 aa11.8□□□□□ -0.52
VPS33A-201ENST00000267199 ITGA11Q9UKX5 1188 aa11.8□□□□□ -0.52
VPS33A-201ENST00000267199 A0A087WXM4 84 aa11.8□□□□□ -0.52
VPS33A-201ENST00000267199 PLA2G6O60733 806 aa11.8□□□□□ -0.52
VPS33A-201ENST00000267199 RTN3O95197 1032 aaPredicted RBP11.8□□□□□ -0.52
VPS33A-201ENST00000267199 SERPINA6P08185 405 aa11.8□□□□□ -0.52
VPS33A-201ENST00000267199 RAP1GDS1P52306 607 aa11.8□□□□□ -0.52
VPS33A-201ENST00000267199 POU6F1Q14863 301 aa11.8□□□□□ -0.52
VPS33A-201ENST00000267199 GALNTL6Q49A17 601 aa11.8□□□□□ -0.52
VPS33A-201ENST00000267199 KYAT3Q6YP21 454 aaKnown RBP11.8□□□□□ -0.52
VPS33A-201ENST00000267199 TMC7Q7Z402 723 aa11.8□□□□□ -0.52
VPS33A-201ENST00000267199 NETO2Q8NC67 525 aa11.8□□□□□ -0.52
VPS33A-201ENST00000267199 RCN3Q96D15 328 aa11.8□□□□□ -0.52
VPS33A-201ENST00000267199 ZFYVE19Q96K21 471 aa11.8□□□□□ -0.52
VPS33A-201ENST00000267199 SYT15Q9BQS2 421 aa11.8□□□□□ -0.52
VPS33A-201ENST00000267199 BBS2Q9BXC9 721 aa11.8□□□□□ -0.52
VPS33A-201ENST00000267199 DGCR6LQ9BY27 220 aa11.8□□□□□ -0.52
VPS33A-201ENST00000267199 SCN3BQ9NY72 215 aa11.8□□□□□ -0.52
VPS33A-201ENST00000267199 TMEM59LQ9UK28 342 aa11.8□□□□□ -0.52
VPS33A-201ENST00000267199 CROTQ9UKG9 612 aa11.8□□□□□ -0.52
VPS33A-201ENST00000267199 RGS5O15539 181 aa11.8□□□□□ -0.52
VPS33A-201ENST00000267199 ZNF862O60290 1169 aa11.8□□□□□ -0.52
VPS33A-201ENST00000267199 TM7SF2O76062 418 aa11.8□□□□□ -0.52
VPS33A-201ENST00000267199 ASMTLO95671 621 aa11.8□□□□□ -0.52
VPS33A-201ENST00000267199 GJB1P08034 283 aa11.8□□□□□ -0.52
VPS33A-201ENST00000267199 CYP2B6P20813 491 aa11.8□□□□□ -0.52
VPS33A-201ENST00000267199 ACAT1P24752 427 aaKnown RBP11.8□□□□□ -0.52
VPS33A-201ENST00000267199 CDK7P50613 346 aa11.8□□□□□ -0.52
VPS33A-201ENST00000267199 SATL1Q86VE3 508 aa11.8□□□□□ -0.52
VPS33A-201ENST00000267199 ADGRF2Q8IZF7 708 aa11.8□□□□□ -0.52
VPS33A-201ENST00000267199 L3MBTL3Q96JM7 780 aaPredicted RBP11.8□□□□□ -0.52
VPS33A-201ENST00000267199 FAM210AQ96ND0 272 aa11.8□□□□□ -0.52
VPS33A-201ENST00000267199 EBF3Q9H4W6 596 aa11.8□□□□□ -0.52
VPS33A-201ENST00000267199 VANGL2Q9ULK5 521 aa11.8□□□□□ -0.52
VPS33A-201ENST00000267199 CST3P01034 146 aaPredicted RBP11.79□□□□□ -0.52
VPS33A-201ENST00000267199 SLC6A3Q01959 620 aa11.79□□□□□ -0.52
VPS33A-201ENST00000267199 CHRNB3Q05901 458 aa11.79□□□□□ -0.52
VPS33A-201ENST00000267199 MIER2Q8N344 545 aa11.79□□□□□ -0.52
VPS33A-201ENST00000267199 COPS5Q92905 334 aa11.79□□□□□ -0.52
VPS33A-201ENST00000267199 ZNF333Q96JL9 665 aa11.79□□□□□ -0.52
VPS33A-201ENST00000267199 ST6GALNAC4Q9H4F1 302 aa11.79□□□□□ -0.52
VPS33A-201ENST00000267199 NMRAL1Q9HBL8 299 aa11.79□□□□□ -0.52
VPS33A-201ENST00000267199 S100A14Q9HCY8 104 aa11.79□□□□□ -0.52
VPS33A-201ENST00000267199 XPNPEP3Q9NQH7 507 aa11.79□□□□□ -0.52
VPS33A-201ENST00000267199 TMA7Q9Y2S6 64 aaKnown RBP11.79□□□□□ -0.52
VPS33A-201ENST00000267199 PRPF4O43172 522 aaKnown RBP eCLIP11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms