RNA–Protein interactions for RNA: ENST00000266546.10

CLSTN3-201, Transcript of calsyntenin 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CLSTN3, Length 4,185 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-201ENST00000266546 GRM5P41594 1212 aa11.82□□□□□ -0.52
CLSTN3-201ENST00000266546 ALDH1A3P47895 512 aa11.82□□□□□ -0.52
CLSTN3-201ENST00000266546 FLT3LGP49771 235 aa11.82□□□□□ -0.52
CLSTN3-201ENST00000266546 PRMT2P55345 433 aa11.82□□□□□ -0.52
CLSTN3-201ENST00000266546 YWHAHQ04917 246 aaPredicted RBP11.82□□□□□ -0.52
CLSTN3-201ENST00000266546 GRIK3Q13003 919 aa11.82□□□□□ -0.52
CLSTN3-201ENST00000266546 ZFP1Q6P2D0 407 aa11.82□□□□□ -0.52
CLSTN3-201ENST00000266546 THEM5Q8N1Q8 247 aa11.82□□□□□ -0.52
CLSTN3-201ENST00000266546 APPL2Q8NEU8 664 aa11.82□□□□□ -0.52
CLSTN3-201ENST00000266546 TMCO1Q9UM00 188 aa11.82□□□□□ -0.52
CLSTN3-201ENST00000266546 C2orf71A6NGG8 1288 aa11.81□□□□□ -0.52
CLSTN3-201ENST00000266546 LACTBL1A8MY62 500 aa11.81□□□□□ -0.52
CLSTN3-201ENST00000266546 CDK7P50613 346 aa11.81□□□□□ -0.52
CLSTN3-201ENST00000266546 FASTKD3Q14CZ7 662 aaKnown RBP11.81□□□□□ -0.52
CLSTN3-201ENST00000266546 EFHC2Q5JST6 749 aa11.81□□□□□ -0.52
CLSTN3-201ENST00000266546 ZBTB49Q6ZSB9 765 aa11.81□□□□□ -0.52
CLSTN3-201ENST00000266546 NPLOC4Q8TAT6 608 aa11.81□□□□□ -0.52
CLSTN3-201ENST00000266546 BORCS6Q96GS4 357 aa11.81□□□□□ -0.52
CLSTN3-201ENST00000266546 CLPTM1LQ96KA5 538 aa11.81□□□□□ -0.52
CLSTN3-201ENST00000266546 NAT9Q9BTE0 207 aa11.81□□□□□ -0.52
CLSTN3-201ENST00000266546 DCUN1D5Q9BTE7 237 aa11.81□□□□□ -0.52
CLSTN3-201ENST00000266546 PAIP1Q9H074 479 aaKnown RBP11.81□□□□□ -0.52
CLSTN3-201ENST00000266546 C12orf65Q9H3J6 166 aaKnown RBP11.81□□□□□ -0.52
CLSTN3-201ENST00000266546 COPS7BQ9H9Q2 264 aaPredicted RBP11.81□□□□□ -0.52
CLSTN3-201ENST00000266546 EML4Q9HC35 981 aaKnown RBP11.81□□□□□ -0.52
CLSTN3-201ENST00000266546 WASF2Q9Y6W5 498 aa11.81□□□□□ -0.52
CLSTN3-201ENST00000266546 PRR5-ARHGAP8B1AHC4 643 aa11.81□□□□□ -0.52
CLSTN3-201ENST00000266546 TBX10O75333 385 aa11.81□□□□□ -0.52
CLSTN3-201ENST00000266546 TM7SF2O76062 418 aa11.81□□□□□ -0.52
CLSTN3-201ENST00000266546 TOMM70O94826 608 aa11.81□□□□□ -0.52
CLSTN3-201ENST00000266546 GNRH1P01148 92 aa11.81□□□□□ -0.52
CLSTN3-201ENST00000266546 ITGAVP06756 1048 aa11.81□□□□□ -0.52
CLSTN3-201ENST00000266546 PDGFRBP09619 1106 aa11.81□□□□□ -0.52
CLSTN3-201ENST00000266546 HSPA1AP0DMV8 641 aaKnown RBP11.81□□□□□ -0.52
CLSTN3-201ENST00000266546 HSPA1BP0DMV9 641 aaKnown RBP11.81□□□□□ -0.52
CLSTN3-201ENST00000266546 UQCRBP14927 111 aa11.81□□□□□ -0.52
CLSTN3-201ENST00000266546 TFE3P19532 575 aaPredicted RBP11.81□□□□□ -0.52
CLSTN3-201ENST00000266546 ARHGAP8P85298 464 aa11.81□□□□□ -0.52
CLSTN3-201ENST00000266546 CRHR2Q13324 411 aa11.81□□□□□ -0.52
CLSTN3-201ENST00000266546 UBAP2LQ14157 1087 aaKnown RBP11.81□□□□□ -0.52
CLSTN3-201ENST00000266546 KRT72Q14CN4 511 aa11.81□□□□□ -0.52
CLSTN3-201ENST00000266546 TDRD10Q5VZ19 366 aaKnown RBP11.81□□□□□ -0.52
CLSTN3-201ENST00000266546 LLGL2Q6P1M3 1020 aa11.81□□□□□ -0.52
CLSTN3-201ENST00000266546 RMND5BQ96G75 393 aaPredicted RBP11.81□□□□□ -0.52
CLSTN3-201ENST00000266546 CDRT15Q96T59 188 aa11.81□□□□□ -0.52
CLSTN3-201ENST00000266546 FSD1LQ9BXM9 530 aa11.81□□□□□ -0.52
CLSTN3-201ENST00000266546 CPSF3Q9UKF6 684 aaKnown RBP11.81□□□□□ -0.52
CLSTN3-201ENST00000266546 APOC4-APOC2K7ER74 178 aa11.81□□□□□ -0.52
CLSTN3-201ENST00000266546 APOC2P02655 101 aa11.81□□□□□ -0.52
CLSTN3-201ENST00000266546 C4BPAP04003 597 aaKnown RBP11.81□□□□□ -0.52
CLSTN3-201ENST00000266546 ATN1P54259 1190 aaPredicted RBP11.81□□□□□ -0.52
CLSTN3-201ENST00000266546 UGP2Q16851 508 aa11.81□□□□□ -0.52
CLSTN3-201ENST00000266546 LRRC38Q5VT99 294 aa11.81□□□□□ -0.52
CLSTN3-201ENST00000266546 C10orf82Q8WW14 230 aa11.81□□□□□ -0.52
CLSTN3-201ENST00000266546 SEC14L1Q92503 715 aa11.81□□□□□ -0.52
CLSTN3-201ENST00000266546 SYT15Q9BQS2 421 aa11.81□□□□□ -0.52
CLSTN3-201ENST00000266546 ZMYND8Q9ULU4 1186 aaPredicted RBP11.81□□□□□ -0.52
CLSTN3-201ENST00000266546 CCDC85CA6NKD9 419 aa11.8□□□□□ -0.52
CLSTN3-201ENST00000266546 MAN1A2O60476 641 aa11.8□□□□□ -0.52
CLSTN3-201ENST00000266546 MAGEC1O60732 1142 aa11.8□□□□□ -0.52
CLSTN3-201ENST00000266546 SERPINA6P08185 405 aa11.8□□□□□ -0.52
CLSTN3-201ENST00000266546 BEX3Q00994 111 aa11.8□□□□□ -0.52
CLSTN3-201ENST00000266546 MBTD1Q05BQ5 628 aa11.8□□□□□ -0.52
CLSTN3-201ENST00000266546 RWDD4Q6NW29 188 aaKnown RBP11.8□□□□□ -0.52
CLSTN3-201ENST00000266546 C16orf46Q6P387 395 aa11.8□□□□□ -0.52
CLSTN3-201ENST00000266546 KYAT3Q6YP21 454 aaKnown RBP11.8□□□□□ -0.52
CLSTN3-201ENST00000266546 RINLQ6ZS11 566 aa11.8□□□□□ -0.52
CLSTN3-201ENST00000266546 CAPNS2Q96L46 248 aa11.8□□□□□ -0.52
CLSTN3-201ENST00000266546 MECRQ9BV79 373 aa11.8□□□□□ -0.52
CLSTN3-201ENST00000266546 PAPPA2Q9BXP8 1791 aa11.8□□□□□ -0.52
CLSTN3-201ENST00000266546 IGKV6-21A0A0C4DH24 114 aa11.8□□□□□ -0.52
CLSTN3-201ENST00000266546 SEPT4O43236 478 aa11.8□□□□□ -0.52
CLSTN3-201ENST00000266546 DEAF1O75398 565 aaPredicted RBP11.8□□□□□ -0.52
CLSTN3-201ENST00000266546 TCEA3O75764 348 aa11.8□□□□□ -0.52
CLSTN3-201ENST00000266546 ASS1P00966 412 aaKnown RBP11.8□□□□□ -0.52
CLSTN3-201ENST00000266546 CTSHP09668 335 aa11.8□□□□□ -0.52
CLSTN3-201ENST00000266546 ME2P23368 584 aa11.8□□□□□ -0.52
CLSTN3-201ENST00000266546 PAX3P23760 479 aa11.8□□□□□ -0.52
CLSTN3-201ENST00000266546 RPL7AP62424 266 aaKnown RBP11.8□□□□□ -0.52
CLSTN3-201ENST00000266546 NME3Q13232 169 aa11.8□□□□□ -0.52
CLSTN3-201ENST00000266546 LPCAT4Q643R3 524 aa11.8□□□□□ -0.52
CLSTN3-201ENST00000266546 MYLK4Q86YV6 388 aaPredicted RBP11.8□□□□□ -0.52
CLSTN3-201ENST00000266546 DDIASQ8IXT1 998 aa11.8□□□□□ -0.52
CLSTN3-201ENST00000266546 SEMA4DQ92854 862 aa11.8□□□□□ -0.52
CLSTN3-201ENST00000266546 HMX1Q9NP08 348 aaPredicted RBP11.8□□□□□ -0.52
CLSTN3-201ENST00000266546 GPATCH2LQ9NWQ4 482 aa11.8□□□□□ -0.52
CLSTN3-201ENST00000266546 TRDMT1O14717 391 aaKnown RBP11.8□□□□□ -0.52
CLSTN3-201ENST00000266546 PFDN6O15212 129 aa11.8□□□□□ -0.52
CLSTN3-201ENST00000266546 APOA4P06727 396 aa11.8□□□□□ -0.52
CLSTN3-201ENST00000266546 DARSP14868 501 aaKnown RBP11.8□□□□□ -0.52
CLSTN3-201ENST00000266546 THPOP40225 353 aa11.8□□□□□ -0.52
CLSTN3-201ENST00000266546 FOLH1Q04609 750 aa11.8□□□□□ -0.52
CLSTN3-201ENST00000266546 PDK2Q15119 407 aa11.8□□□□□ -0.52
CLSTN3-201ENST00000266546 EEF1DP3Q658K8 133 aa11.8□□□□□ -0.52
CLSTN3-201ENST00000266546 PATL1Q86TB9 770 aaKnown RBP11.8□□□□□ -0.52
CLSTN3-201ENST00000266546 SNX32Q86XE0 403 aa11.8□□□□□ -0.52
CLSTN3-201ENST00000266546 TDRPQ86YL5 185 aa11.8□□□□□ -0.52
CLSTN3-201ENST00000266546 CLVS1Q8IUQ0 354 aaPredicted RBP11.8□□□□□ -0.52
CLSTN3-201ENST00000266546 TDRD5Q8NAT2 981 aaKnown RBP11.8□□□□□ -0.52
CLSTN3-201ENST00000266546 CNPY3Q9BT09 278 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms