RNA–Protein interactions for RNA: ENST00000265619.6

VAPB-201, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 3,596 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-201ENST00000265619 LRTOMTQ8WZ04 291 aa8.99□□□□□ -0.97
VAPB-201ENST00000265619 IL12RB2Q99665 862 aa8.99□□□□□ -0.97
VAPB-201ENST00000265619 CIB1Q99828 191 aa8.99□□□□□ -0.97
VAPB-201ENST00000265619 OSBPL11Q9BXB4 747 aa8.99□□□□□ -0.97
VAPB-201ENST00000265619 SLC7A5P2Q9GIP4 190 aa8.99□□□□□ -0.97
VAPB-201ENST00000265619 MUC3BQ9H195 1237 aa8.99□□□□□ -0.97
VAPB-201ENST00000265619 RIC8BQ9NVN3 520 aa8.99□□□□□ -0.97
VAPB-201ENST00000265619 GNPTGQ9UJJ9 305 aa8.99□□□□□ -0.97
VAPB-201ENST00000265619 RABGAP1Q9Y3P9 1069 aa8.99□□□□□ -0.97
VAPB-201ENST00000265619 NFASCO94856 1347 aa8.99□□□□□ -0.97
VAPB-201ENST00000265619 KBTBD13C9JR72 458 aa8.99□□□□□ -0.97
VAPB-201ENST00000265619 SGK1O00141 431 aa8.99□□□□□ -0.97
VAPB-201ENST00000265619 ARHGAP33O14559 1287 aa8.99□□□□□ -0.97
VAPB-201ENST00000265619 NRP1O14786 923 aa8.99□□□□□ -0.97
VAPB-201ENST00000265619 RFPL1O75677 317 aa8.99□□□□□ -0.97
VAPB-201ENST00000265619 C1QAP02745 245 aa8.99□□□□□ -0.97
VAPB-201ENST00000265619 COX4I1P13073 169 aa8.99□□□□□ -0.97
VAPB-201ENST00000265619 CKMT2P17540 419 aa8.99□□□□□ -0.97
VAPB-201ENST00000265619 MATN1P21941 496 aa8.99□□□□□ -0.97
VAPB-201ENST00000265619 ELK3P41970 407 aa8.99□□□□□ -0.97
VAPB-201ENST00000265619 BFSP1Q12934 665 aa8.99□□□□□ -0.97
VAPB-201ENST00000265619 IKBKEQ14164 716 aa8.99□□□□□ -0.97
VAPB-201ENST00000265619 STILQ15468 1287 aa8.99□□□□□ -0.97
VAPB-201ENST00000265619 SMAD1Q15797 465 aaKnown RBP8.99□□□□□ -0.97
VAPB-201ENST00000265619 PDPK2PQ6A1A2 396 aa8.99□□□□□ -0.97
VAPB-201ENST00000265619 GADL1Q6ZQY3 521 aa8.99□□□□□ -0.97
VAPB-201ENST00000265619 OSTM1Q86WC4 334 aa8.99□□□□□ -0.97
VAPB-201ENST00000265619 PALM2Q8IXS6 379 aa8.99□□□□□ -0.97
VAPB-201ENST00000265619 FAM71AQ8IYT1 594 aa8.99□□□□□ -0.97
VAPB-201ENST00000265619 PDZD8Q8NEN9 1154 aa8.99□□□□□ -0.97
VAPB-201ENST00000265619 POMGNT1Q8WZA1 660 aa8.99□□□□□ -0.97
VAPB-201ENST00000265619 SGF29Q96ES7 293 aa8.99□□□□□ -0.97
VAPB-201ENST00000265619 FIZ1Q96SL8 496 aa8.99□□□□□ -0.97
VAPB-201ENST00000265619 MARCH7Q9H992 704 aa8.99□□□□□ -0.97
VAPB-201ENST00000265619 AGPAT3Q9NRZ7 376 aa8.99□□□□□ -0.97
VAPB-201ENST00000265619 DKK3Q9UBP4 350 aa8.99□□□□□ -0.97
VAPB-201ENST00000265619 GABBR1Q9UBS5 961 aa8.99□□□□□ -0.97
VAPB-201ENST00000265619 TRAF6Q9Y4K3 522 aa8.99□□□□□ -0.97
VAPB-201ENST00000265619 BPTFQ12830 3046 aa8.99□□□□□ -0.97
VAPB-201ENST00000265619 HMX2A2RU54 273 aa8.99□□□□□ -0.97
VAPB-201ENST00000265619 NFIBO00712 420 aa8.99□□□□□ -0.97
VAPB-201ENST00000265619 GZMAP12544 262 aa8.99□□□□□ -0.97
VAPB-201ENST00000265619 PTPN2P17706 415 aa8.99□□□□□ -0.97
VAPB-201ENST00000265619 POLR2IP36954 125 aaKnown RBP8.99□□□□□ -0.97
VAPB-201ENST00000265619 OPRL1P41146 370 aa8.99□□□□□ -0.97
VAPB-201ENST00000265619 CLCQ05315 142 aa8.99□□□□□ -0.97
VAPB-201ENST00000265619 MOGQ16653 247 aa8.99□□□□□ -0.97
VAPB-201ENST00000265619 ZNF394Q53GI3 561 aa8.99□□□□□ -0.97
VAPB-201ENST00000265619 MTX3Q5HYI7 312 aa8.99□□□□□ -0.97
VAPB-201ENST00000265619 WDR45BQ5MNZ6 344 aa8.99□□□□□ -0.97
VAPB-201ENST00000265619 UBE2UQ5VVX9 321 aa8.99□□□□□ -0.97
VAPB-201ENST00000265619 SULF1Q8IWU6 871 aa8.99□□□□□ -0.97
VAPB-201ENST00000265619 NAT16Q8N8M0 369 aa8.99□□□□□ -0.97
VAPB-201ENST00000265619 LILRB4Q8NHJ6 448 aa8.99□□□□□ -0.97
VAPB-201ENST00000265619 OTUD5Q96G74 571 aa8.99□□□□□ -0.97
VAPB-201ENST00000265619 MARK4Q96L34 752 aa8.99□□□□□ -0.97
VAPB-201ENST00000265619 FBXL18Q96ME1 805 aa8.99□□□□□ -0.97
VAPB-201ENST00000265619 LENG8Q96PV6 779 aaPredicted RBP8.99□□□□□ -0.97
VAPB-201ENST00000265619 SYT17Q9BSW7 474 aa8.99□□□□□ -0.97
VAPB-201ENST00000265619 RPAP3Q9H6T3 665 aaPredicted RBP8.99□□□□□ -0.97
VAPB-201ENST00000265619 PLAC1Q9HBJ0 212 aa8.99□□□□□ -0.97
VAPB-201ENST00000265619 DUS2Q9NX74 493 aaKnown RBP8.99□□□□□ -0.97
VAPB-201ENST00000265619 KDM3AQ9Y4C1 1321 aa8.98□□□□□ -0.97
VAPB-201ENST00000265619 E2F8A0AVK6 867 aa8.98□□□□□ -0.97
VAPB-201ENST00000265619 ZNF195O14628 629 aa8.98□□□□□ -0.97
VAPB-201ENST00000265619 MGEA5O60502 916 aa8.98□□□□□ -0.97
VAPB-201ENST00000265619 BMP10O95393 424 aa8.98□□□□□ -0.97
VAPB-201ENST00000265619 SERPINB5P36952 375 aa8.98□□□□□ -0.97
VAPB-201ENST00000265619 HPCAL1P37235 193 aa8.98□□□□□ -0.97
VAPB-201ENST00000265619 PTPN9P43378 593 aa8.98□□□□□ -0.97
VAPB-201ENST00000265619 NUDT2P50583 147 aa8.98□□□□□ -0.97
VAPB-201ENST00000265619 AP3M2P53677 418 aa8.98□□□□□ -0.97
VAPB-201ENST00000265619 DYNLT1P63172 113 aa8.98□□□□□ -0.97
VAPB-201ENST00000265619 WASHC5Q12768 1159 aa8.98□□□□□ -0.97
VAPB-201ENST00000265619 TEDDM1Q5T9Z0 273 aa8.98□□□□□ -0.97
VAPB-201ENST00000265619 C11orf74Q86VG3 221 aa8.98□□□□□ -0.97
VAPB-201ENST00000265619 LDHDQ86WU2 507 aa8.98□□□□□ -0.97
VAPB-201ENST00000265619 MYCT1Q8N699 235 aa8.98□□□□□ -0.97
VAPB-201ENST00000265619 OR7G1Q8NGA0 311 aa8.98□□□□□ -0.97
VAPB-201ENST00000265619 EXD1Q8NHP7 514 aa8.98□□□□□ -0.97
VAPB-201ENST00000265619 AGR3Q8TD06 166 aa8.98□□□□□ -0.97
VAPB-201ENST00000265619 SLC44A1Q8WWI5 657 aa8.98□□□□□ -0.97
VAPB-201ENST00000265619 ALKBH8Q96BT7 664 aaKnown RBP8.98□□□□□ -0.97
VAPB-201ENST00000265619 VCPIP1Q96JH7 1222 aa8.98□□□□□ -0.97
VAPB-201ENST00000265619 CSF3RQ99062 836 aa8.98□□□□□ -0.97
VAPB-201ENST00000265619 FERMT1Q9BQL6 677 aa8.98□□□□□ -0.97
VAPB-201ENST00000265619 IRF2BPLQ9H1B7 796 aa8.98□□□□□ -0.97
VAPB-201ENST00000265619 NANOGQ9H9S0 305 aa8.98□□□□□ -0.97
VAPB-201ENST00000265619 CLK4Q9HAZ1 481 aaKnown RBP8.98□□□□□ -0.97
VAPB-201ENST00000265619 AASDHPPTQ9NRN7 309 aa8.98□□□□□ -0.97
VAPB-201ENST00000265619 SLC17A6Q9P2U8 582 aa8.98□□□□□ -0.97
VAPB-201ENST00000265619 FBXO9Q9UK97 447 aaPredicted RBP8.98□□□□□ -0.97
VAPB-201ENST00000265619 LRRC37AA6NMS7 1700 aa8.98□□□□□ -0.97
VAPB-201ENST00000265619 CAPNS1P04632 268 aa8.98□□□□□ -0.97
VAPB-201ENST00000265619 NFATC3Q12968 1075 aa8.98□□□□□ -0.97
VAPB-201ENST00000265619 ITIH5Q86UX2 942 aa8.98□□□□□ -0.97
VAPB-201ENST00000265619 TPH2Q8IWU9 490 aa8.98□□□□□ -0.97
VAPB-201ENST00000265619 ADGRF2Q8IZF7 708 aa8.98□□□□□ -0.97
VAPB-201ENST00000265619 CACTIN-AS1Q8N1I8 211 aa8.98□□□□□ -0.97
VAPB-201ENST00000265619 ELMOD1Q8N336 334 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms