RNA–Protein interactions for RNA: ENST00000265077.7

VCAN-201, Transcript of versican, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VCAN, Length 12,625 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-201ENST00000265077 FAM45BPQ6NSW5 357 aa5.82□□□□□ -1.48
VCAN-201ENST00000265077 NECAB2Q7Z6G3 386 aa5.82□□□□□ -1.48
VCAN-201ENST00000265077 DENND6AQ8IWF6 608 aa5.82□□□□□ -1.48
VCAN-201ENST00000265077 TBC1D19Q8N5T2 526 aa5.82□□□□□ -1.48
VCAN-201ENST00000265077 AFG1LQ8WV93 481 aa5.82□□□□□ -1.48
VCAN-201ENST00000265077 ATL1Q8WXF7 558 aa5.82□□□□□ -1.48
VCAN-201ENST00000265077 PAFAH2Q99487 392 aa5.82□□□□□ -1.48
VCAN-201ENST00000265077 MYOM1P52179 1685 aa5.82□□□□□ -1.48
VCAN-201ENST00000265077 GPD1P21695 349 aa5.82□□□□□ -1.48
VCAN-201ENST00000265077 ANXA11P50995 505 aaKnown RBP5.82□□□□□ -1.48
VCAN-201ENST00000265077 ANTXR2P58335 489 aa5.82□□□□□ -1.48
VCAN-201ENST00000265077 ARSHQ5FYA8 562 aa5.82□□□□□ -1.48
VCAN-201ENST00000265077 ZCCHC8Q6NZY4 707 aaKnown RBP5.82□□□□□ -1.48
VCAN-201ENST00000265077 DENND1BQ6P3S1 775 aa5.82□□□□□ -1.48
VCAN-201ENST00000265077 ASCC1Q8N9N2 400 aaKnown RBP5.82□□□□□ -1.48
VCAN-201ENST00000265077 VCPIP1Q96JH7 1222 aa5.82□□□□□ -1.48
VCAN-201ENST00000265077 WRNIP1Q96S55 665 aa5.82□□□□□ -1.48
VCAN-201ENST00000265077 TINF2Q9BSI4 451 aa5.82□□□□□ -1.48
VCAN-201ENST00000265077 UNKQ9C0B0 810 aaKnown RBP5.82□□□□□ -1.48
VCAN-201ENST00000265077 CDC42EP4Q9H3Q1 356 aaKnown RBP5.82□□□□□ -1.48
VCAN-201ENST00000265077 WDR6Q9NNW5 1121 aaKnown RBP5.82□□□□□ -1.48
VCAN-201ENST00000265077 TCF7L2Q9NQB0 619 aa5.82□□□□□ -1.48
VCAN-201ENST00000265077 TOR4AQ9NXH8 423 aa5.82□□□□□ -1.48
VCAN-201ENST00000265077 VANGL2Q9ULK5 521 aa5.82□□□□□ -1.48
VCAN-201ENST00000265077 TFR2Q9UP52 801 aa5.82□□□□□ -1.48
VCAN-201ENST00000265077 CLOCKO15516 846 aa5.82□□□□□ -1.48
VCAN-201ENST00000265077 SCARF1Q14162 830 aa5.82□□□□□ -1.48
VCAN-201ENST00000265077 ZNF829Q3KNS6 432 aaPredicted RBP5.82□□□□□ -1.48
VCAN-201ENST00000265077 SPDYE7PQ495Y7 208 aa5.82□□□□□ -1.48
VCAN-201ENST00000265077 ATP13A5Q4VNC0 1218 aa5.82□□□□□ -1.48
VCAN-201ENST00000265077 AARS2Q5JTZ9 985 aaKnown RBP5.82□□□□□ -1.48
VCAN-201ENST00000265077 IER5Q5VY09 327 aa5.82□□□□□ -1.48
VCAN-201ENST00000265077 RAB43Q86YS6 212 aa5.82□□□□□ -1.48
VCAN-201ENST00000265077 TMEM143Q96AN5 459 aa5.82□□□□□ -1.48
VCAN-201ENST00000265077 MED30Q96HR3 178 aa5.82□□□□□ -1.48
VCAN-201ENST00000265077 HEPHQ9BQS7 1158 aa5.82□□□□□ -1.48
VCAN-201ENST00000265077 CASS4Q9NQ75 786 aa5.82□□□□□ -1.48
VCAN-201ENST00000265077 SRP68Q9UHB9 627 aaKnown RBP5.82□□□□□ -1.48
VCAN-201ENST00000265077 PMF1-BGLAPU3KQ54 211 aa5.82□□□□□ -1.48
VCAN-201ENST00000265077 UBA6A0AVT1 1052 aaPredicted RBP5.82□□□□□ -1.48
VCAN-201ENST00000265077 FAM47E-STBD1D6RA91 191 aa5.82□□□□□ -1.48
VCAN-201ENST00000265077 MAPK1P28482 360 aa5.82□□□□□ -1.48
VCAN-201ENST00000265077 SOX11P35716 441 aa5.82□□□□□ -1.48
VCAN-201ENST00000265077 RAB25P57735 213 aa5.82□□□□□ -1.48
VCAN-201ENST00000265077 RPL26P61254 145 aaKnown RBP5.82□□□□□ -1.48
VCAN-201ENST00000265077 POU4F1Q01851 419 aa5.82□□□□□ -1.48
VCAN-201ENST00000265077 CUL2Q13617 745 aa5.82□□□□□ -1.48
VCAN-201ENST00000265077 EFR3AQ14156 821 aa5.82□□□□□ -1.48
VCAN-201ENST00000265077 PON2Q15165 354 aa5.82□□□□□ -1.48
VCAN-201ENST00000265077 GARNL3Q5VVW2 1013 aa5.82□□□□□ -1.48
VCAN-201ENST00000265077 SLC43A3Q8NBI5 491 aa5.82□□□□□ -1.48
VCAN-201ENST00000265077 MMP19Q99542 508 aa5.82□□□□□ -1.48
VCAN-201ENST00000265077 SERHL2Q9H4I8 314 aa5.82□□□□□ -1.48
VCAN-201ENST00000265077 NEK6Q9HC98 313 aa5.82□□□□□ -1.48
VCAN-201ENST00000265077 TBX20Q9UMR3 447 aa5.82□□□□□ -1.48
VCAN-201ENST00000265077 NOTCH3Q9UM47 2321 aa5.82□□□□□ -1.48
VCAN-201ENST00000265077 OR7A10O76100 309 aa5.82□□□□□ -1.48
VCAN-201ENST00000265077 CYP19A1P11511 503 aaPredicted RBP5.82□□□□□ -1.48
VCAN-201ENST00000265077 PCSK1P29120 753 aa5.82□□□□□ -1.48
VCAN-201ENST00000265077 PPM1LQ5SGD2 360 aa5.82□□□□□ -1.48
VCAN-201ENST00000265077 BROXQ5VW32 411 aa5.82□□□□□ -1.48
VCAN-201ENST00000265077 SLC26A11Q86WA9 606 aa5.82□□□□□ -1.48
VCAN-201ENST00000265077 SLC22A9Q8IVM8 553 aa5.82□□□□□ -1.48
VCAN-201ENST00000265077 FBXO25Q8TCJ0 367 aa5.82□□□□□ -1.48
VCAN-201ENST00000265077 LACRTQ9GZZ8 138 aa5.82□□□□□ -1.48
VCAN-201ENST00000265077 SLC6A15Q9H2J7 730 aa5.82□□□□□ -1.48
VCAN-201ENST00000265077 ANKRD6Q9Y2G4 727 aa5.82□□□□□ -1.48
VCAN-201ENST00000265077 ACTL7BQ9Y614 415 aa5.82□□□□□ -1.48
VCAN-201ENST00000265077 RBP1P09455 135 aa5.82□□□□□ -1.48
VCAN-201ENST00000265077 COG2Q14746 738 aa5.82□□□□□ -1.48
VCAN-201ENST00000265077 ALFQ53S48 1182 aa5.82□□□□□ -1.48
VCAN-201ENST00000265077 USP49Q70CQ1 688 aa5.82□□□□□ -1.48
VCAN-201ENST00000265077 ENDOVQ8N8Q3 282 aaKnown RBP5.82□□□□□ -1.48
VCAN-201ENST00000265077 MND1Q9BWT6 205 aa5.82□□□□□ -1.48
VCAN-201ENST00000265077 SORCS3Q9UPU3 1222 aa5.82□□□□□ -1.48
VCAN-201ENST00000265077 STON1Q9Y6Q2 735 aa5.82□□□□□ -1.48
VCAN-201ENST00000265077 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP5.82□□□□□ -1.48
VCAN-201ENST00000265077 AGPSO00116 658 aa5.82□□□□□ -1.48
VCAN-201ENST00000265077 SSX5O60225 188 aa5.82□□□□□ -1.48
VCAN-201ENST00000265077 VPS4BO75351 444 aa5.82□□□□□ -1.48
VCAN-201ENST00000265077 KATNA1O75449 491 aa5.82□□□□□ -1.48
VCAN-201ENST00000265077 ACOT2P49753 483 aa5.82□□□□□ -1.48
VCAN-201ENST00000265077 MROH9Q5TGP6 573 aa5.82□□□□□ -1.48
VCAN-201ENST00000265077 SLC7A5P2Q9GIP4 190 aa5.82□□□□□ -1.48
VCAN-201ENST00000265077 EBF3Q9H4W6 596 aa5.82□□□□□ -1.48
VCAN-201ENST00000265077 POLR1BQ9H9Y6 1135 aa5.82□□□□□ -1.48
VCAN-201ENST00000265077 CAMSAP3Q9P1Y5 1249 aaPredicted RBP5.82□□□□□ -1.48
VCAN-201ENST00000265077 SCN2AQ99250 2005 aa5.82□□□□□ -1.48
VCAN-201ENST00000265077 LOC100653049A0A140TA62 436 aa5.82□□□□□ -1.48
VCAN-201ENST00000265077 NCAM2O15394 837 aa5.82□□□□□ -1.48
VCAN-201ENST00000265077 KRT34O76011 436 aa5.82□□□□□ -1.48
VCAN-201ENST00000265077 HSMCR30P0CW71 290 aa5.82□□□□□ -1.48
VCAN-201ENST00000265077 IFI30P13284 250 aa5.82□□□□□ -1.48
VCAN-201ENST00000265077 HK2P52789 917 aa5.82□□□□□ -1.48
VCAN-201ENST00000265077 GTF2H3Q13889 308 aa5.82□□□□□ -1.48
VCAN-201ENST00000265077 SNAP47Q5SQN1 464 aa5.82□□□□□ -1.48
VCAN-201ENST00000265077 RASSF6Q6ZTQ3 369 aa5.82□□□□□ -1.48
VCAN-201ENST00000265077 PHC2Q8IXK0 858 aa5.82□□□□□ -1.48
VCAN-201ENST00000265077 ZCCHC9Q8N567 271 aaKnown RBP5.82□□□□□ -1.48
VCAN-201ENST00000265077 RORBQ92753 470 aa5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms