RNA–Protein interactions for RNA: ENST00000264723.8

CSPG5-201, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CSPG5, Length 4,080 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-201ENST00000264723 METTL18O95568 372 aa20.32■□□□□ 0.84
CSPG5-201ENST00000264723 CSH1P0DML2 217 aa20.32■□□□□ 0.84
CSPG5-201ENST00000264723 CSH2P0DML3 217 aa20.32■□□□□ 0.84
CSPG5-201ENST00000264723 ACADSP16219 412 aa20.32■□□□□ 0.84
CSPG5-201ENST00000264723 XPAP23025 273 aaPredicted RBP20.32■□□□□ 0.84
CSPG5-201ENST00000264723 MBTD1Q05BQ5 628 aa20.32■□□□□ 0.84
CSPG5-201ENST00000264723 MAP2K5Q13163 448 aa20.32■□□□□ 0.84
CSPG5-201ENST00000264723 MAGEC3Q8TD91 643 aa20.32■□□□□ 0.84
CSPG5-201ENST00000264723 AZIN2Q96A70 460 aa20.32■□□□□ 0.84
CSPG5-201ENST00000264723 TBCBQ99426 244 aa20.32■□□□□ 0.84
CSPG5-201ENST00000264723 PHACTR1Q9C0D0 580 aa20.32■□□□□ 0.84
CSPG5-201ENST00000264723 LRCH1Q9Y2L9 728 aa20.32■□□□□ 0.84
CSPG5-201ENST00000264723 KIF3CO14782 793 aa20.31■□□□□ 0.84
CSPG5-201ENST00000264723 CCNHP51946 323 aaPredicted RBP20.31■□□□□ 0.84
CSPG5-201ENST00000264723 PLK1P53350 603 aa20.31■□□□□ 0.84
CSPG5-201ENST00000264723 PCDH19Q8TAB3 1148 aa20.31■□□□□ 0.84
CSPG5-201ENST00000264723 EBNA1BP2Q99848 306 aaKnown RBP20.31■□□□□ 0.84
CSPG5-201ENST00000264723 VCX3AQ9NNX9 186 aa20.31■□□□□ 0.84
CSPG5-201ENST00000264723 ZNF358Q9NW07 568 aa20.31■□□□□ 0.84
CSPG5-201ENST00000264723 CYTH4Q9UIA0 394 aa20.31■□□□□ 0.84
CSPG5-201ENST00000264723 RUVBL2Q9Y230 463 aaKnown RBP20.31■□□□□ 0.84
CSPG5-201ENST00000264723 C2CD2Q9Y426 696 aa20.31■□□□□ 0.84
CSPG5-201ENST00000264723 PAPPAQ13219 1627 aa20.31■□□□□ 0.84
CSPG5-201ENST00000264723 A0A096LPK6 155 aa20.31■□□□□ 0.84
CSPG5-201ENST00000264723 TBL3Q12788 808 aaKnown RBP20.31■□□□□ 0.84
CSPG5-201ENST00000264723 CNBD2Q96M20 576 aa20.31■□□□□ 0.84
CSPG5-201ENST00000264723 CATSPER2Q96P56 530 aa20.31■□□□□ 0.84
CSPG5-201ENST00000264723 MTG1Q9BT17 334 aaPredicted RBP20.31■□□□□ 0.84
CSPG5-201ENST00000264723 ZCWPW1Q9H0M4 648 aa20.31■□□□□ 0.84
CSPG5-201ENST00000264723 SDCBP2Q9H190 292 aa20.31■□□□□ 0.84
CSPG5-201ENST00000264723 SCAMP3O14828 347 aaKnown RBP20.31■□□□□ 0.84
CSPG5-201ENST00000264723 CILPO75339 1184 aa20.31■□□□□ 0.84
CSPG5-201ENST00000264723 SREBF2Q12772 1141 aa20.31■□□□□ 0.84
CSPG5-201ENST00000264723 CGB2Q6NT52 195 aa20.31■□□□□ 0.84
CSPG5-201ENST00000264723 C10orf107Q8IVU9 208 aa20.31■□□□□ 0.84
CSPG5-201ENST00000264723 LRRC43Q8N309 656 aa20.31■□□□□ 0.84
CSPG5-201ENST00000264723 B3GALNT2Q8NCR0 500 aa20.31■□□□□ 0.84
CSPG5-201ENST00000264723 PIWIL2Q8TC59 973 aaKnown RBP20.31■□□□□ 0.84
CSPG5-201ENST00000264723 WDR60Q8WVS4 1066 aa20.31■□□□□ 0.84
CSPG5-201ENST00000264723 DDX60LQ5H9U9 1706 aaKnown RBP20.3■□□□□ 0.84
CSPG5-201ENST00000264723 TCEA3O75764 348 aa20.3■□□□□ 0.84
CSPG5-201ENST00000264723 MMP3P08254 477 aa20.3■□□□□ 0.84
CSPG5-201ENST00000264723 LHX1P48742 406 aa20.3■□□□□ 0.84
CSPG5-201ENST00000264723 OLIG2Q13516 323 aa20.3■□□□□ 0.84
CSPG5-201ENST00000264723 APBA2Q99767 749 aa20.3■□□□□ 0.84
CSPG5-201ENST00000264723 FRMD8Q9BZ67 464 aaPredicted RBP20.3■□□□□ 0.84
CSPG5-201ENST00000264723 ST3GAL5Q9UNP4 418 aa20.3■□□□□ 0.84
CSPG5-201ENST00000264723 PLLPQ9Y342 182 aa20.3■□□□□ 0.84
CSPG5-201ENST00000264723 SMIM28A0A1B0GU29 152 aa20.3■□□□□ 0.84
CSPG5-201ENST00000264723 DCAKDQ8WVC6 231 aa20.3■□□□□ 0.84
CSPG5-201ENST00000264723 DPEP3Q9H4B8 488 aa20.3■□□□□ 0.84
CSPG5-201ENST00000264723 KCNH4Q9UQ05 1017 aa20.3■□□□□ 0.84
CSPG5-201ENST00000264723 MAGEA13PA6NCF6 341 aa20.3■□□□□ 0.84
CSPG5-201ENST00000264723 ATP6V1C1P21283 382 aa20.3■□□□□ 0.84
CSPG5-201ENST00000264723 YWHAHQ04917 246 aaPredicted RBP20.3■□□□□ 0.84
CSPG5-201ENST00000264723 FLOT2Q14254 428 aa20.3■□□□□ 0.84
CSPG5-201ENST00000264723 CDHR3Q6ZTQ4 885 aa20.3■□□□□ 0.84
CSPG5-201ENST00000264723 DCP1BQ8IZD4 617 aaKnown RBP20.3■□□□□ 0.84
CSPG5-201ENST00000264723 PPHLN1Q8NEY8 458 aaKnown RBP20.3■□□□□ 0.84
CSPG5-201ENST00000264723 NMD3Q96D46 503 aaKnown RBP20.3■□□□□ 0.84
CSPG5-201ENST00000264723 GCNAQ96QF7 691 aa20.3■□□□□ 0.84
CSPG5-201ENST00000264723 ZNF184Q99676 751 aaPredicted RBP20.3■□□□□ 0.84
CSPG5-201ENST00000264723 KCNK4Q9NYG8 393 aa20.3■□□□□ 0.84
CSPG5-201ENST00000264723 ARHGAP26Q9UNA1 814 aa20.3■□□□□ 0.84
CSPG5-201ENST00000264723 AURKCQ9UQB9 309 aa20.3■□□□□ 0.84
CSPG5-201ENST00000264723 TSPAN1O60635 241 aa20.29■□□□□ 0.84
CSPG5-201ENST00000264723 TFE3P19532 575 aaPredicted RBP20.29■□□□□ 0.84
CSPG5-201ENST00000264723 MPP3Q13368 585 aa20.29■□□□□ 0.84
CSPG5-201ENST00000264723 SDHAF4Q5VUM1 108 aa20.29■□□□□ 0.84
CSPG5-201ENST00000264723 LRRC8EQ6NSJ5 796 aa20.29■□□□□ 0.84
CSPG5-201ENST00000264723 TAS2R42Q7RTR8 314 aa20.29■□□□□ 0.84
CSPG5-201ENST00000264723 ILKAPQ9H0C8 392 aaPredicted RBP20.29■□□□□ 0.84
CSPG5-201ENST00000264723 TMPRSS4Q9NRS4 437 aa20.29■□□□□ 0.84
CSPG5-201ENST00000264723 DCDC2Q9UHG0 476 aa20.29■□□□□ 0.84
CSPG5-201ENST00000264723 VANGL2Q9ULK5 521 aa20.29■□□□□ 0.84
CSPG5-201ENST00000264723 CDY1Q9Y6F8 540 aa20.29■□□□□ 0.84
CSPG5-201ENST00000264723 ETS2P15036 469 aa20.29■□□□□ 0.84
CSPG5-201ENST00000264723 YBX3P16989 372 aaKnown RBP eCLIP20.29■□□□□ 0.84
CSPG5-201ENST00000264723 CD52P31358 61 aa20.29■□□□□ 0.84
CSPG5-201ENST00000264723 CTXN3Q4LDR2 81 aa20.29■□□□□ 0.84
CSPG5-201ENST00000264723 TDRPQ86YL5 185 aa20.29■□□□□ 0.84
CSPG5-201ENST00000264723 ULK2Q8IYT8 1036 aa20.29■□□□□ 0.84
CSPG5-201ENST00000264723 OMDQ99983 421 aa20.29■□□□□ 0.84
CSPG5-201ENST00000264723 NHSL1Q5SYE7 1610 aa20.29■□□□□ 0.84
CSPG5-201ENST00000264723 NAGLUP54802 743 aa20.29■□□□□ 0.84
CSPG5-201ENST00000264723 TRMT5Q32P41 509 aaKnown RBP20.29■□□□□ 0.84
CSPG5-201ENST00000264723 ZSCAN18Q8TBC5 510 aaPredicted RBP20.29■□□□□ 0.84
CSPG5-201ENST00000264723 PEBP4Q96S96 227 aa20.29■□□□□ 0.84
CSPG5-201ENST00000264723 TKTL2Q9H0I9 626 aa20.29■□□□□ 0.84
CSPG5-201ENST00000264723 MANSC4A6NHS7 340 aaPredicted RBP20.28■□□□□ 0.84
CSPG5-201ENST00000264723 BRCC3P46736 316 aa20.28■□□□□ 0.84
CSPG5-201ENST00000264723 LPCAT4Q643R3 524 aa20.28■□□□□ 0.84
CSPG5-201ENST00000264723 LCA5Q86VQ0 697 aa20.28■□□□□ 0.84
CSPG5-201ENST00000264723 FBXO32Q969P5 355 aa20.28■□□□□ 0.84
CSPG5-201ENST00000264723 MAML3Q96JK9 1138 aa20.28■□□□□ 0.84
CSPG5-201ENST00000264723 CATSPERBQ9H7T0 1116 aa20.28■□□□□ 0.84
CSPG5-201ENST00000264723 ARHGEF38Q9NXL2 777 aa20.28■□□□□ 0.84
CSPG5-201ENST00000264723 AK5Q9Y6K8 562 aa20.28■□□□□ 0.84
CSPG5-201ENST00000264723 TBX10O75333 385 aa20.28■□□□□ 0.84
CSPG5-201ENST00000264723 C22orf31O95567 290 aa20.28■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms