RNA–Protein interactions for RNA: ENST00000264012.8

CDH3-201, Transcript of cadherin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH3, Length 4,929 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-201ENST00000264012 MSCO60682 206 aa14.29□□□□□ -0.12
CDH3-201ENST00000264012 SHBGP04278 402 aa14.29□□□□□ -0.12
CDH3-201ENST00000264012 MMP13P45452 471 aa14.29□□□□□ -0.12
CDH3-201ENST00000264012 MMRN1Q13201 1228 aa14.29□□□□□ -0.12
CDH3-201ENST00000264012 TMEM154Q6P9G4 183 aa14.29□□□□□ -0.12
CDH3-201ENST00000264012 PATL1Q86TB9 770 aaKnown RBP14.29□□□□□ -0.12
CDH3-201ENST00000264012 MTMR14Q8NCE2 650 aa14.29□□□□□ -0.12
CDH3-201ENST00000264012 LTN1O94822 1766 aa14.29□□□□□ -0.12
CDH3-201ENST00000264012 KLRC2P26717 231 aa14.29□□□□□ -0.12
CDH3-201ENST00000264012 MREGQ8N565 214 aa14.29□□□□□ -0.12
CDH3-201ENST00000264012 USP6NLQ92738 828 aa14.29□□□□□ -0.12
CDH3-201ENST00000264012 UROC1Q96N76 676 aa14.29□□□□□ -0.12
CDH3-201ENST00000264012 EIF2AQ9BY44 585 aaKnown RBP14.29□□□□□ -0.12
CDH3-201ENST00000264012 NMRK1Q9NWW6 199 aa14.29□□□□□ -0.12
CDH3-201ENST00000264012 ARHGAP28Q9P2N2 729 aa14.29□□□□□ -0.12
CDH3-201ENST00000264012 UBA2Q9UBT2 640 aaPredicted RBP14.29□□□□□ -0.12
CDH3-201ENST00000264012 UBDO15205 165 aa14.29□□□□□ -0.12
CDH3-201ENST00000264012 FGF10O15520 208 aaPredicted RBP14.29□□□□□ -0.12
CDH3-201ENST00000264012 ITGAVP06756 1048 aa14.29□□□□□ -0.12
CDH3-201ENST00000264012 PSMA4P25789 261 aaKnown RBP14.29□□□□□ -0.12
CDH3-201ENST00000264012 CD52P31358 61 aa14.29□□□□□ -0.12
CDH3-201ENST00000264012 NAB1Q13506 487 aa14.29□□□□□ -0.12
CDH3-201ENST00000264012 PSTKQ8IV42 348 aaKnown RBP14.29□□□□□ -0.12
CDH3-201ENST00000264012 OTULINQ96BN8 352 aa14.29□□□□□ -0.12
CDH3-201ENST00000264012 NXF3Q9H4D5 531 aaKnown RBP14.29□□□□□ -0.12
CDH3-201ENST00000264012 RAD54BQ9Y620 910 aa14.29□□□□□ -0.12
CDH3-201ENST00000264012 B4GALT4O60513 344 aa14.29□□□□□ -0.12
CDH3-201ENST00000264012 NOL4O94818 638 aa14.29□□□□□ -0.12
CDH3-201ENST00000264012 PLOD1Q02809 727 aaPredicted RBP14.29□□□□□ -0.12
CDH3-201ENST00000264012 ZNF670Q9BS34 389 aa14.29□□□□□ -0.12
CDH3-201ENST00000264012 CD248Q9HCU0 757 aa14.29□□□□□ -0.12
CDH3-201ENST00000264012 SEPT3Q9UH03 358 aa14.29□□□□□ -0.12
CDH3-201ENST00000264012 DPP7Q9UHL4 492 aa14.29□□□□□ -0.12
CDH3-201ENST00000264012 FCHO1O14526 889 aa14.28□□□□□ -0.12
CDH3-201ENST00000264012 USP2O75604 605 aaPredicted RBP14.28□□□□□ -0.12
CDH3-201ENST00000264012 ZCWPW2Q504Y3 356 aa14.28□□□□□ -0.12
CDH3-201ENST00000264012 OR52K1Q8NGK4 314 aa14.28□□□□□ -0.12
CDH3-201ENST00000264012 CLEC4DQ8WXI8 215 aa14.28□□□□□ -0.12
CDH3-201ENST00000264012 TAS2R13Q9NYV9 303 aa14.28□□□□□ -0.12
CDH3-201ENST00000264012 DTNAQ9Y4J8 743 aa14.28□□□□□ -0.12
CDH3-201ENST00000264012 NR5A2O00482 541 aa14.28□□□□□ -0.12
CDH3-201ENST00000264012 UBTFL6P0CB48 400 aaPredicted RBP14.28□□□□□ -0.12
CDH3-201ENST00000264012 ERVK-10P10266 1014 aa14.28□□□□□ -0.12
CDH3-201ENST00000264012 RAP1GDS1P52306 607 aa14.28□□□□□ -0.12
CDH3-201ENST00000264012 MAP3K10Q02779 954 aa14.28□□□□□ -0.12
CDH3-201ENST00000264012 AUHQ13825 339 aaKnown RBP14.28□□□□□ -0.12
CDH3-201ENST00000264012 NFYCQ13952 458 aa14.28□□□□□ -0.12
CDH3-201ENST00000264012 AGKQ53H12 422 aa14.28□□□□□ -0.12
CDH3-201ENST00000264012 PPP1R26Q5T8A7 1209 aaPredicted RBP14.28□□□□□ -0.12
CDH3-201ENST00000264012 C11orf96Q7Z7L8 435 aa14.28□□□□□ -0.12
CDH3-201ENST00000264012 HORMAD1Q86X24 394 aa14.28□□□□□ -0.12
CDH3-201ENST00000264012 ZBTB10Q96DT7 871 aa14.28□□□□□ -0.12
CDH3-201ENST00000264012 POLR1EQ9GZS1 481 aaKnown RBP14.28□□□□□ -0.12
CDH3-201ENST00000264012 ST6GALNAC4Q9H4F1 302 aa14.28□□□□□ -0.12
CDH3-201ENST00000264012 PRDM12Q9H4Q4 367 aa14.28□□□□□ -0.12
CDH3-201ENST00000264012 ACTR8Q9H981 624 aa14.28□□□□□ -0.12
CDH3-201ENST00000264012 UXTQ9UBK9 157 aaPredicted RBP14.28□□□□□ -0.12
CDH3-201ENST00000264012 PBLDP30039 288 aaPredicted RBP14.28□□□□□ -0.12
CDH3-201ENST00000264012 RPL9P32969 192 aaKnown RBP14.28□□□□□ -0.12
CDH3-201ENST00000264012 ATP5C1P36542 298 aaKnown RBP14.28□□□□□ -0.12
CDH3-201ENST00000264012 SP3Q02447 781 aa14.28□□□□□ -0.12
CDH3-201ENST00000264012 SCARA3Q6AZY7 606 aa14.28□□□□□ -0.12
CDH3-201ENST00000264012 ART4Q93070 314 aa14.28□□□□□ -0.12
CDH3-201ENST00000264012 MYLPFQ96A32 169 aa14.28□□□□□ -0.12
CDH3-201ENST00000264012 LENG9Q96B70 501 aa14.28□□□□□ -0.12
CDH3-201ENST00000264012 VPS50Q96JG6 964 aa14.28□□□□□ -0.12
CDH3-201ENST00000264012 DCLRE1BQ9H816 532 aa14.28□□□□□ -0.12
CDH3-201ENST00000264012 GIMAP4Q9NUV9 329 aa14.28□□□□□ -0.12
CDH3-201ENST00000264012 PNMA8BQ9ULN7 279 aaPredicted RBP14.28□□□□□ -0.12
CDH3-201ENST00000264012 AMHP03971 560 aa14.27□□□□□ -0.12
CDH3-201ENST00000264012 PLD1Q13393 1074 aa14.27□□□□□ -0.12
CDH3-201ENST00000264012 FAM110CQ1W6H9 321 aa14.27□□□□□ -0.12
CDH3-201ENST00000264012 NOMO2Q5JPE7 1267 aa14.27□□□□□ -0.12
CDH3-201ENST00000264012 GRAMD4Q6IC98 578 aa14.27□□□□□ -0.12
CDH3-201ENST00000264012 ZCCHC23Q6ZST2 131 aa14.27□□□□□ -0.12
CDH3-201ENST00000264012 GLT6D1Q7Z4J2 308 aa14.27□□□□□ -0.12
CDH3-201ENST00000264012 IL22Q9GZX6 179 aa14.27□□□□□ -0.12
CDH3-201ENST00000264012 CACNA1FO60840 1977 aa14.27□□□□□ -0.12
CDH3-201ENST00000264012 PEX10O60683 326 aa14.27□□□□□ -0.12
CDH3-201ENST00000264012 RNASEH1O60930 286 aaKnown RBP14.27□□□□□ -0.12
CDH3-201ENST00000264012 ATP4AP20648 1035 aa14.27□□□□□ -0.12
CDH3-201ENST00000264012 ARL4DP49703 201 aa14.27□□□□□ -0.12
CDH3-201ENST00000264012 CRADDP78560 199 aa14.27□□□□□ -0.12
CDH3-201ENST00000264012 WLSQ5T9L3 541 aa14.27□□□□□ -0.12
CDH3-201ENST00000264012 GFM2Q969S9 779 aaKnown RBP14.27□□□□□ -0.12
CDH3-201ENST00000264012 CDHR5Q9HBB8 845 aa14.27□□□□□ -0.12
CDH3-201ENST00000264012 TMEM191CA6NGB0 347 aa14.27□□□□□ -0.13
CDH3-201ENST00000264012 ALADP13716 330 aa14.27□□□□□ -0.13
CDH3-201ENST00000264012 ACADSP16219 412 aa14.27□□□□□ -0.13
CDH3-201ENST00000264012 ZNF7P17097 686 aaPredicted RBP14.27□□□□□ -0.13
CDH3-201ENST00000264012 ITGB6P18564 788 aa14.27□□□□□ -0.13
CDH3-201ENST00000264012 MMP8P22894 467 aa14.27□□□□□ -0.13
CDH3-201ENST00000264012 MAPK1P28482 360 aa14.27□□□□□ -0.13
CDH3-201ENST00000264012 FBXW4P57775 412 aa14.27□□□□□ -0.13
CDH3-201ENST00000264012 ZC3H12BQ5HYM0 836 aaKnown RBP14.27□□□□□ -0.13
CDH3-201ENST00000264012 NEPROQ6NW34 567 aa14.27□□□□□ -0.13
CDH3-201ENST00000264012 KYAT3Q6YP21 454 aaKnown RBP14.27□□□□□ -0.13
CDH3-201ENST00000264012 FAM9CQ8IZT9 166 aa14.27□□□□□ -0.13
CDH3-201ENST00000264012 FBXO39Q8N4B4 442 aa14.27□□□□□ -0.13
CDH3-201ENST00000264012 HELQQ8TDG4 1101 aa14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms