RNA–Protein interactions for RNA: ENST00000263741.11

SDF4-201, Transcript of stromal cell derived factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SDF4, Length 2,079 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-201ENST00000263741 NTAN1Q96AB6 310 aa18.93■□□□□ 0.62
SDF4-201ENST00000263741 ZDHHC4Q9NPG8 344 aa18.93■□□□□ 0.62
SDF4-201ENST00000263741 MPP6Q9NZW5 540 aa18.93■□□□□ 0.62
SDF4-201ENST00000263741 FZD10Q9ULW2 581 aa18.93■□□□□ 0.62
SDF4-201ENST00000263741 USP18Q9UMW8 372 aa18.93■□□□□ 0.62
SDF4-201ENST00000263741 NUP205Q92621 2012 aa18.93■□□□□ 0.62
SDF4-201ENST00000263741 E9PAM4 449 aa18.93■□□□□ 0.62
SDF4-201ENST00000263741 PI15O43692 258 aa18.93■□□□□ 0.62
SDF4-201ENST00000263741 PRPSAP2O60256 369 aa18.93■□□□□ 0.62
SDF4-201ENST00000263741 MTA2O94776 668 aa18.93■□□□□ 0.62
SDF4-201ENST00000263741 PROSCO94903 275 aa18.93■□□□□ 0.62
SDF4-201ENST00000263741 GLULP15104 373 aa18.93■□□□□ 0.62
SDF4-201ENST00000263741 MLLT6P55198 1093 aaPredicted RBP18.93■□□□□ 0.62
SDF4-201ENST00000263741 TAS2R40P59535 323 aa18.93■□□□□ 0.62
SDF4-201ENST00000263741 ALFQ53S48 1182 aa18.93■□□□□ 0.62
SDF4-201ENST00000263741 EFHC2Q5JST6 749 aa18.93■□□□□ 0.62
SDF4-201ENST00000263741 PHTF2Q8N3S3 785 aa18.93■□□□□ 0.62
SDF4-201ENST00000263741 PJA1Q8NG27 643 aa18.93■□□□□ 0.62
SDF4-201ENST00000263741 PBXIP1Q96AQ6 731 aa18.93■□□□□ 0.62
SDF4-201ENST00000263741 HAPLN3Q96S86 360 aa18.93■□□□□ 0.62
SDF4-201ENST00000263741 ARHGEF4Q9NR80 690 aa18.93■□□□□ 0.62
SDF4-201ENST00000263741 KLHL11Q9NVR0 708 aa18.93■□□□□ 0.62
SDF4-201ENST00000263741 AP4E1Q9UPM8 1137 aa18.93■□□□□ 0.62
SDF4-201ENST00000263741 ADGRG1Q9Y653 693 aa18.93■□□□□ 0.62
SDF4-201ENST00000263741 FAM170BA6NMN3 283 aa18.92■□□□□ 0.62
SDF4-201ENST00000263741 MAN2B1O00754 1011 aa18.92■□□□□ 0.62
SDF4-201ENST00000263741 DCNP07585 359 aaKnown RBP18.92■□□□□ 0.62
SDF4-201ENST00000263741 SLC25A11Q02978 314 aaKnown RBP18.92■□□□□ 0.62
SDF4-201ENST00000263741 SCAPQ12770 1279 aa18.92■□□□□ 0.62
SDF4-201ENST00000263741 TMEM196Q5HYL7 178 aa18.92■□□□□ 0.62
SDF4-201ENST00000263741 TFAP2DQ7Z6R9 452 aa18.92■□□□□ 0.62
SDF4-201ENST00000263741 CCDC105Q8IYK2 499 aa18.92■□□□□ 0.62
SDF4-201ENST00000263741 ZNF687Q8N1G0 1237 aa18.92■□□□□ 0.62
SDF4-201ENST00000263741 XPO6Q96QU8 1125 aaKnown RBP18.92■□□□□ 0.62
SDF4-201ENST00000263741 DHX35Q9H5Z1 703 aaKnown RBP18.92■□□□□ 0.62
SDF4-201ENST00000263741 DEC1Q9P2X7 70 aa18.92■□□□□ 0.62
SDF4-201ENST00000263741 OR12D3Q9UGF7 316 aa18.92■□□□□ 0.62
SDF4-201ENST00000263741 WDFY4Q6ZS81 3184 aa18.92■□□□□ 0.62
SDF4-201ENST00000263741 CHD5Q8TDI0 1954 aa18.91■□□□□ 0.62
SDF4-201ENST00000263741 TYW5A2RUC4 315 aaKnown RBP18.91■□□□□ 0.62
SDF4-201ENST00000263741 DGKGP49619 791 aa18.91■□□□□ 0.62
SDF4-201ENST00000263741 KRT83P78385 493 aa18.91■□□□□ 0.62
SDF4-201ENST00000263741 FSCBQ5H9T9 825 aa18.91■□□□□ 0.62
SDF4-201ENST00000263741 GRAMD4Q6IC98 578 aa18.91■□□□□ 0.62
SDF4-201ENST00000263741 Q6ZS52 159 aa18.91■□□□□ 0.62
SDF4-201ENST00000263741 MFN1Q8IWA4 741 aa18.91■□□□□ 0.62
SDF4-201ENST00000263741 HSPH1Q92598 858 aa18.91■□□□□ 0.62
SDF4-201ENST00000263741 MSANTD3Q96H12 275 aa18.91■□□□□ 0.62
SDF4-201ENST00000263741 PNKPQ96T60 521 aa18.91■□□□□ 0.62
SDF4-201ENST00000263741 NEU3Q9UQ49 428 aa18.91■□□□□ 0.62
SDF4-201ENST00000263741 CREB3O43889 395 aa18.91■□□□□ 0.62
SDF4-201ENST00000263741 BUB1BO60566 1050 aaPredicted RBP18.91■□□□□ 0.62
SDF4-201ENST00000263741 LRIG2O94898 1065 aa18.91■□□□□ 0.62
SDF4-201ENST00000263741 LUC7L3O95232 432 aaKnown RBP18.91■□□□□ 0.62
SDF4-201ENST00000263741 KAT7O95251 611 aa18.91■□□□□ 0.62
SDF4-201ENST00000263741 HLA-FP30511 346 aa18.91■□□□□ 0.62
SDF4-201ENST00000263741 CD70P32970 193 aa18.91■□□□□ 0.62
SDF4-201ENST00000263741 PCK1P35558 622 aa18.91■□□□□ 0.62
SDF4-201ENST00000263741 SEC13P55735 322 aa18.91■□□□□ 0.62
SDF4-201ENST00000263741 AMPD2Q01433 879 aa18.91■□□□□ 0.62
SDF4-201ENST00000263741 GEN1Q17RS7 908 aa18.91■□□□□ 0.62
SDF4-201ENST00000263741 RABGAP1LQ5R372 815 aa18.91■□□□□ 0.62
SDF4-201ENST00000263741 CCAR2Q8N163 923 aaKnown RBP18.91■□□□□ 0.62
SDF4-201ENST00000263741 ZMYND15Q9H091 742 aa18.91■□□□□ 0.62
SDF4-201ENST00000263741 ABCB8Q9NUT2 735 aa18.91■□□□□ 0.62
SDF4-201ENST00000263741 ZNF318Q5VUA4 2279 aa18.91■□□□□ 0.62
SDF4-201ENST00000263741 MUC22E2RYF6 1773 aaPredicted RBP18.9■□□□□ 0.62
SDF4-201ENST00000263741 MACROD2A1Z1Q3 448 aa18.9■□□□□ 0.62
SDF4-201ENST00000263741 CISD3P0C7P0 127 aa18.9■□□□□ 0.62
SDF4-201ENST00000263741 CDH18Q13634 790 aa18.9■□□□□ 0.62
SDF4-201ENST00000263741 PPP6R3Q5H9R7 873 aaPredicted RBP18.9■□□□□ 0.62
SDF4-201ENST00000263741 MANEALQ5VSG8 457 aa18.9■□□□□ 0.62
SDF4-201ENST00000263741 RWDD4Q6NW29 188 aaKnown RBP18.9■□□□□ 0.62
SDF4-201ENST00000263741 NYAP1Q6ZVC0 841 aa18.9■□□□□ 0.62
SDF4-201ENST00000263741 TERB1Q8NA31 727 aa18.9■□□□□ 0.62
SDF4-201ENST00000263741 OR52K2Q8NGK3 314 aa18.9■□□□□ 0.62
SDF4-201ENST00000263741 ZNF592Q92610 1267 aa18.9■□□□□ 0.62
SDF4-201ENST00000263741 C1orf74Q96LT6 269 aa18.9■□□□□ 0.62
SDF4-201ENST00000263741 KCTD15Q96SI1 283 aaPredicted RBP18.9■□□□□ 0.62
SDF4-201ENST00000263741 CACNA1IQ9P0X4 2223 aa18.9■□□□□ 0.62
SDF4-201ENST00000263741 TUBB4AP04350 444 aa18.89■□□□□ 0.62
SDF4-201ENST00000263741 GRSF1Q12849 480 aaKnown RBP eCLIP18.89■□□□□ 0.62
SDF4-201ENST00000263741 MTA1Q13330 715 aa18.89■□□□□ 0.62
SDF4-201ENST00000263741 FZD5Q13467 585 aa18.89■□□□□ 0.62
SDF4-201ENST00000263741 CCINQ13939 588 aa18.89■□□□□ 0.62
SDF4-201ENST00000263741 ACAP1Q15027 740 aa18.89■□□□□ 0.62
SDF4-201ENST00000263741 TCEAL1Q15170 157 aa18.89■□□□□ 0.62
SDF4-201ENST00000263741 ATP13A4Q4VNC1 1196 aa18.89■□□□□ 0.62
SDF4-201ENST00000263741 ERMARDQ5T6L9 678 aa18.89■□□□□ 0.62
SDF4-201ENST00000263741 LRRC31Q6UY01 552 aa18.89■□□□□ 0.62
SDF4-201ENST00000263741 OSBPL2Q9H1P3 480 aa18.89■□□□□ 0.62
SDF4-201ENST00000263741 STAU2Q9NUL3 570 aaKnown RBP eCLIP18.89■□□□□ 0.62
SDF4-201ENST00000263741 NYNRINQ9P2P1 1898 aaKnown RBP18.89■□□□□ 0.61
SDF4-201ENST00000263741 A0A1B0GVM2 712 aa18.89■□□□□ 0.61
SDF4-201ENST00000263741 TCAF2A6NFQ2 919 aa18.89■□□□□ 0.61
SDF4-201ENST00000263741 PRRT4C9JH25 899 aa18.89■□□□□ 0.61
SDF4-201ENST00000263741 H0Y626 953 aa18.89■□□□□ 0.61
SDF4-201ENST00000263741 PJA2O43164 708 aa18.89■□□□□ 0.61
SDF4-201ENST00000263741 APODP05090 189 aa18.89■□□□□ 0.61
SDF4-201ENST00000263741 RARAP10276 462 aa18.89■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms