RNA–Protein interactions for RNA: ENST00000263121.11

SMARCB1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMARCB1, Length 1,690 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-201ENST00000263121 HEATR6Q6AI08 1181 aaKnown RBP23.56■■□□□ 1.36
SMARCB1-201ENST00000263121 HS6ST3Q8IZP7 471 aa23.56■■□□□ 1.36
SMARCB1-201ENST00000263121 ELMOD1Q8N336 334 aa23.56■■□□□ 1.36
SMARCB1-201ENST00000263121 GDF15Q99988 308 aa23.56■■□□□ 1.36
SMARCB1-201ENST00000263121 KLF16Q9BXK1 252 aaPredicted RBP23.56■■□□□ 1.36
SMARCB1-201ENST00000263121 VANGL2Q9ULK5 521 aa23.56■■□□□ 1.36
SMARCB1-201ENST00000263121 CLASP2O75122 1294 aaKnown RBP23.55■■□□□ 1.36
SMARCB1-201ENST00000263121 GABRR2P28476 465 aa23.55■■□□□ 1.36
SMARCB1-201ENST00000263121 PPM1LQ5SGD2 360 aa23.55■■□□□ 1.36
SMARCB1-201ENST00000263121 RAP1GAP2Q684P5 730 aa23.55■■□□□ 1.36
SMARCB1-201ENST00000263121 NADSYN1Q6IA69 706 aa23.55■■□□□ 1.36
SMARCB1-201ENST00000263121 GAREM2Q75VX8 874 aa23.55■■□□□ 1.36
SMARCB1-201ENST00000263121 NLRP14Q86W24 1093 aa23.55■■□□□ 1.36
SMARCB1-201ENST00000263121 RTL3Q8N8U3 475 aaKnown RBP23.55■■□□□ 1.36
SMARCB1-201ENST00000263121 SLC22A17Q8WUG5 538 aa23.55■■□□□ 1.36
SMARCB1-201ENST00000263121 HTR3CQ8WXA8 447 aa23.55■■□□□ 1.36
SMARCB1-201ENST00000263121 BRD8Q9H0E9 1235 aa23.55■■□□□ 1.36
SMARCB1-201ENST00000263121 PAK5Q9P286 719 aa23.55■■□□□ 1.36
SMARCB1-201ENST00000263121 FARP1Q9Y4F1 1045 aaPredicted RBP23.55■■□□□ 1.36
SMARCB1-201ENST00000263121 CLUHO75153 1309 aa23.55■■□□□ 1.36
SMARCB1-201ENST00000263121 C5orf60A6NFR6 353 aa23.54■■□□□ 1.36
SMARCB1-201ENST00000263121 GCATO75600 419 aa23.54■■□□□ 1.36
SMARCB1-201ENST00000263121 ZNF189O75820 626 aaPredicted RBP23.54■■□□□ 1.36
SMARCB1-201ENST00000263121 STC2O76061 302 aa23.54■■□□□ 1.36
SMARCB1-201ENST00000263121 MX2P20592 715 aa23.54■■□□□ 1.36
SMARCB1-201ENST00000263121 DHX9Q08211 1270 aaKnown RBP23.54■■□□□ 1.36
SMARCB1-201ENST00000263121 MORF4L2Q15014 288 aa23.54■■□□□ 1.36
SMARCB1-201ENST00000263121 FBXL22Q6P050 247 aa23.54■■□□□ 1.36
SMARCB1-201ENST00000263121 LRRC31Q6UY01 552 aa23.54■■□□□ 1.36
SMARCB1-201ENST00000263121 PCGF5Q86SE9 256 aa23.54■■□□□ 1.36
SMARCB1-201ENST00000263121 LZTR1Q8N653 840 aa23.54■■□□□ 1.36
SMARCB1-201ENST00000263121 AZIN2Q96A70 460 aa23.54■■□□□ 1.36
SMARCB1-201ENST00000263121 HDAC11Q96DB2 347 aa23.54■■□□□ 1.36
SMARCB1-201ENST00000263121 PBX4Q9BYU1 374 aa23.54■■□□□ 1.36
SMARCB1-201ENST00000263121 MAN1C1Q9NR34 630 aa23.54■■□□□ 1.36
SMARCB1-201ENST00000263121 MPP6Q9NZW5 540 aa23.54■■□□□ 1.36
SMARCB1-201ENST00000263121 SHOC2Q9UQ13 582 aa23.54■■□□□ 1.36
SMARCB1-201ENST00000263121 DENND4CQ5VZ89 1909 aa23.54■■□□□ 1.36
SMARCB1-201ENST00000263121 DRGXA6NNA5 263 aa23.54■■□□□ 1.36
SMARCB1-201ENST00000263121 CCL16O15467 120 aa23.54■■□□□ 1.36
SMARCB1-201ENST00000263121 ACSL4O60488 711 aa23.54■■□□□ 1.36
SMARCB1-201ENST00000263121 HARS2P49590 506 aaKnown RBP23.54■■□□□ 1.36
SMARCB1-201ENST00000263121 PPIDQ08752 370 aaKnown RBP23.54■■□□□ 1.36
SMARCB1-201ENST00000263121 ARHGAP12Q8IWW6 846 aa23.54■■□□□ 1.36
SMARCB1-201ENST00000263121 CPT1BQ92523 772 aa23.54■■□□□ 1.36
SMARCB1-201ENST00000263121 ZFRQ96KR1 1074 aaKnown RBP23.54■■□□□ 1.36
SMARCB1-201ENST00000263121 ZYG11BQ9C0D3 744 aa23.54■■□□□ 1.36
SMARCB1-201ENST00000263121 RHOQP17081 205 aa23.53■■□□□ 1.36
SMARCB1-201ENST00000263121 HOXA9P31269 272 aa23.53■■□□□ 1.36
SMARCB1-201ENST00000263121 ACTN2P35609 894 aa23.53■■□□□ 1.36
SMARCB1-201ENST00000263121 GARSP41250 739 aaKnown RBP23.53■■□□□ 1.36
SMARCB1-201ENST00000263121 IRAK1P51617 712 aa23.53■■□□□ 1.36
SMARCB1-201ENST00000263121 AP1B1Q10567 949 aa23.53■■□□□ 1.36
SMARCB1-201ENST00000263121 AFMIDQ63HM1 303 aa23.53■■□□□ 1.36
SMARCB1-201ENST00000263121 C4orf22Q6V702 233 aa23.53■■□□□ 1.36
SMARCB1-201ENST00000263121 CHSY1Q86X52 802 aa23.53■■□□□ 1.36
SMARCB1-201ENST00000263121 CCNYQ8ND76 341 aa23.53■■□□□ 1.36
SMARCB1-201ENST00000263121 CCDC110Q8TBZ0 833 aa23.53■■□□□ 1.36
SMARCB1-201ENST00000263121 PRCCQ92733 491 aaPredicted RBP23.53■■□□□ 1.36
SMARCB1-201ENST00000263121 IGSF8Q969P0 613 aa23.53■■□□□ 1.36
SMARCB1-201ENST00000263121 P2RY11Q96G91 374 aa23.53■■□□□ 1.36
SMARCB1-201ENST00000263121 SLC22A12Q96S37 553 aa23.53■■□□□ 1.36
SMARCB1-201ENST00000263121 FOXP3Q9BZS1 431 aa23.53■■□□□ 1.36
SMARCB1-201ENST00000263121 TRPC7Q9HCX4 862 aa23.53■■□□□ 1.36
SMARCB1-201ENST00000263121 GKN1Q9NS71 199 aa23.53■■□□□ 1.36
SMARCB1-201ENST00000263121 DOCK4Q8N1I0 1966 aa23.52■■□□□ 1.36
SMARCB1-201ENST00000263121 HSFX4A0A1B0GTS1 333 aaPredicted RBP23.52■■□□□ 1.36
SMARCB1-201ENST00000263121 HSFX3A0A1B0GWH4 333 aaPredicted RBP23.52■■□□□ 1.36
SMARCB1-201ENST00000263121 KLKB1P03952 638 aa23.52■■□□□ 1.36
SMARCB1-201ENST00000263121 EPCAMP16422 314 aa23.52■■□□□ 1.36
SMARCB1-201ENST00000263121 TACR2P21452 398 aa23.52■■□□□ 1.36
SMARCB1-201ENST00000263121 CDC25CP30307 473 aa23.52■■□□□ 1.36
SMARCB1-201ENST00000263121 CHKAP35790 457 aa23.52■■□□□ 1.36
SMARCB1-201ENST00000263121 UAP1Q16222 522 aaPredicted RBP23.52■■□□□ 1.36
SMARCB1-201ENST00000263121 C5orf22Q49AR2 442 aa23.52■■□□□ 1.36
SMARCB1-201ENST00000263121 FAM133BQ5BKY9 247 aaKnown RBP23.52■■□□□ 1.36
SMARCB1-201ENST00000263121 TXNDC8Q6A555 127 aa23.52■■□□□ 1.36
SMARCB1-201ENST00000263121 HOOK3Q86VS8 718 aa23.52■■□□□ 1.36
SMARCB1-201ENST00000263121 PPIL6Q8IXY8 311 aa23.52■■□□□ 1.36
SMARCB1-201ENST00000263121 ZCCHC9Q8N567 271 aaKnown RBP23.52■■□□□ 1.36
SMARCB1-201ENST00000263121 NAT8LQ8N9F0 302 aa23.52■■□□□ 1.36
SMARCB1-201ENST00000263121 MRPS31Q92665 395 aaKnown RBP23.52■■□□□ 1.36
SMARCB1-201ENST00000263121 CELF6Q96J87 481 aaKnown RBP23.52■■□□□ 1.36
SMARCB1-201ENST00000263121 TSPYL1Q9H0U9 437 aa23.52■■□□□ 1.36
SMARCB1-201ENST00000263121 ASAH2Q9NR71 780 aa23.52■■□□□ 1.36
SMARCB1-201ENST00000263121 NDFIP2Q9NV92 336 aa23.52■■□□□ 1.36
SMARCB1-201ENST00000263121 TMEM248Q9NWD8 314 aa23.52■■□□□ 1.36
SMARCB1-201ENST00000263121 FAM53CQ9NYF3 392 aa23.52■■□□□ 1.36
SMARCB1-201ENST00000263121 CHD9Q3L8U1 2897 aa23.52■■□□□ 1.35
SMARCB1-201ENST00000263121 CHD7Q9P2D1 2997 aa23.51■■□□□ 1.35
SMARCB1-201ENST00000263121 A0A0A0MRY4 1105 aa23.51■■□□□ 1.35
SMARCB1-201ENST00000263121 GOLGA6L7A0A1B0GV03 622 aa23.51■■□□□ 1.35
SMARCB1-201ENST00000263121 MBL2P11226 248 aaPredicted RBP23.51■■□□□ 1.35
SMARCB1-201ENST00000263121 HSD17B3P37058 310 aa23.51■■□□□ 1.35
SMARCB1-201ENST00000263121 SLC11A2P49281 568 aa23.51■■□□□ 1.35
SMARCB1-201ENST00000263121 EPHA5P54756 1037 aa23.51■■□□□ 1.35
SMARCB1-201ENST00000263121 CYP4F8P98187 520 aa23.51■■□□□ 1.35
SMARCB1-201ENST00000263121 SLMAPQ14BN4 828 aa23.51■■□□□ 1.35
SMARCB1-201ENST00000263121 SPDYCQ5MJ68 293 aa23.51■■□□□ 1.35
SMARCB1-201ENST00000263121 SPATA13Q96N96 652 aa23.51■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms