RNA–Protein interactions for RNA: ENST00000262676.9

TTC39A-202, Transcript of tetratricopeptide repeat domain 39A, humanhuman

TSL 2 BASIC

Gene TTC39A, Length 6,287 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-202ENST00000262676 SMPD4Q9NXE4 827 aa13.13□□□□□ -0.31
TTC39A-202ENST00000262676 VPS9D1Q9Y2B5 631 aa13.13□□□□□ -0.31
TTC39A-202ENST00000262676 TPRKBQ9Y3C4 175 aa13.13□□□□□ -0.31
TTC39A-202ENST00000262676 ZNF541Q9H0D2 1346 aa13.13□□□□□ -0.31
TTC39A-202ENST00000262676 S100A6P06703 90 aa13.13□□□□□ -0.31
TTC39A-202ENST00000262676 EIF2S3P41091 472 aaKnown RBP13.13□□□□□ -0.31
TTC39A-202ENST00000262676 NR6A1Q15406 480 aa13.13□□□□□ -0.31
TTC39A-202ENST00000262676 CCDC153Q494R4 210 aa13.13□□□□□ -0.31
TTC39A-202ENST00000262676 FAM171A1Q5VUB5 890 aa13.13□□□□□ -0.31
TTC39A-202ENST00000262676 STK32CQ86UX6 486 aa13.13□□□□□ -0.31
TTC39A-202ENST00000262676 LRRC6Q86X45 466 aa13.13□□□□□ -0.31
TTC39A-202ENST00000262676 CAMKK1Q8N5S9 505 aa13.13□□□□□ -0.31
TTC39A-202ENST00000262676 FBXO32Q969P5 355 aa13.13□□□□□ -0.31
TTC39A-202ENST00000262676 CMTM6Q9NX76 183 aa13.13□□□□□ -0.31
TTC39A-202ENST00000262676 MRPS7Q9Y2R9 242 aaKnown RBP13.13□□□□□ -0.31
TTC39A-202ENST00000262676 UBDO15205 165 aa13.12□□□□□ -0.31
TTC39A-202ENST00000262676 AOC2O75106 756 aa13.12□□□□□ -0.31
TTC39A-202ENST00000262676 PABPC1P11940 636 aaKnown RBP13.12□□□□□ -0.31
TTC39A-202ENST00000262676 ERCC2P18074 760 aa13.12□□□□□ -0.31
TTC39A-202ENST00000262676 GRK3P35626 688 aa13.12□□□□□ -0.31
TTC39A-202ENST00000262676 TAF6P49848 677 aa13.12□□□□□ -0.31
TTC39A-202ENST00000262676 RNF19BQ6ZMZ0 732 aa13.12□□□□□ -0.31
TTC39A-202ENST00000262676 MTSS1LQ765P7 747 aa13.12□□□□□ -0.31
TTC39A-202ENST00000262676 DHFR2Q86XF0 187 aa13.12□□□□□ -0.31
TTC39A-202ENST00000262676 RNF148Q8N7C7 305 aa13.12□□□□□ -0.31
TTC39A-202ENST00000262676 HPDLQ96IR7 371 aa13.12□□□□□ -0.31
TTC39A-202ENST00000262676 ETAA1Q9NY74 926 aa13.12□□□□□ -0.31
TTC39A-202ENST00000262676 PRKAG3Q9UGI9 489 aa13.12□□□□□ -0.31
TTC39A-202ENST00000262676 M0QYT0 321 aa13.12□□□□□ -0.31
TTC39A-202ENST00000262676 TCEA3O75764 348 aa13.12□□□□□ -0.31
TTC39A-202ENST00000262676 TMEM253P0C7T8 217 aa13.12□□□□□ -0.31
TTC39A-202ENST00000262676 ZNF37AP17032 561 aaPredicted RBP13.12□□□□□ -0.31
TTC39A-202ENST00000262676 FCHO2Q0JRZ9 810 aa13.12□□□□□ -0.31
TTC39A-202ENST00000262676 APOL2Q9BQE5 337 aa13.12□□□□□ -0.31
TTC39A-202ENST00000262676 BDH2Q9BUT1 245 aa13.12□□□□□ -0.31
TTC39A-202ENST00000262676 NUAK2Q9H093 628 aa13.12□□□□□ -0.31
TTC39A-202ENST00000262676 DPP3Q9NY33 737 aa13.12□□□□□ -0.31
TTC39A-202ENST00000262676 TRPM5Q9NZQ8 1165 aa13.12□□□□□ -0.31
TTC39A-202ENST00000262676 SF3B1O75533 1304 aaKnown RBP eCLIP13.12□□□□□ -0.31
TTC39A-202ENST00000262676 TPD52L2O43399 206 aaKnown RBP13.12□□□□□ -0.31
TTC39A-202ENST00000262676 ECDO95905 644 aaPredicted RBP13.12□□□□□ -0.31
TTC39A-202ENST00000262676 LTFP02788 710 aa13.12□□□□□ -0.31
TTC39A-202ENST00000262676 INSRRP14616 1297 aa13.12□□□□□ -0.31
TTC39A-202ENST00000262676 DSG4Q86SJ6 1040 aa13.12□□□□□ -0.31
TTC39A-202ENST00000262676 CBWD2Q8IUF1 395 aa13.12□□□□□ -0.31
TTC39A-202ENST00000262676 AHCYL2Q96HN2 611 aaKnown RBP13.12□□□□□ -0.31
TTC39A-202ENST00000262676 ABHD16BQ9H3Z7 469 aa13.12□□□□□ -0.31
TTC39A-202ENST00000262676 BCLAF3A2AJT9 711 aaKnown RBP13.12□□□□□ -0.31
TTC39A-202ENST00000262676 THP07101 528 aa13.12□□□□□ -0.31
TTC39A-202ENST00000262676 GSTM5P46439 218 aa13.12□□□□□ -0.31
TTC39A-202ENST00000262676 SCRN3Q0VDG4 424 aa13.12□□□□□ -0.31
TTC39A-202ENST00000262676 PPIL2Q13356 520 aa13.12□□□□□ -0.31
TTC39A-202ENST00000262676 R3HCC1LQ7Z5L2 792 aaKnown RBP13.12□□□□□ -0.31
TTC39A-202ENST00000262676 FAM83AQ86UY5 434 aa13.12□□□□□ -0.31
TTC39A-202ENST00000262676 PHF21BQ96EK2 531 aa13.12□□□□□ -0.31
TTC39A-202ENST00000262676 NSMCE2Q96MF7 247 aa13.12□□□□□ -0.31
TTC39A-202ENST00000262676 THAP2Q9H0W7 228 aa13.12□□□□□ -0.31
TTC39A-202ENST00000262676 KLHL28Q9NXS3 571 aa13.12□□□□□ -0.31
TTC39A-202ENST00000262676 PHF11Q9UIL8 331 aa13.12□□□□□ -0.31
TTC39A-202ENST00000262676 TMX2Q9Y320 296 aa13.12□□□□□ -0.31
TTC39A-202ENST00000262676 KPNA5O15131 536 aa13.12□□□□□ -0.31
TTC39A-202ENST00000262676 PSIP1O75475 530 aaKnown RBP13.12□□□□□ -0.31
TTC39A-202ENST00000262676 SYN1P17600 705 aa13.12□□□□□ -0.31
TTC39A-202ENST00000262676 PPP2R1BP30154 601 aa13.12□□□□□ -0.31
TTC39A-202ENST00000262676 STIP1P31948 543 aaKnown RBP13.12□□□□□ -0.31
TTC39A-202ENST00000262676 RCVRNP35243 200 aa13.12□□□□□ -0.31
TTC39A-202ENST00000262676 SLC1A6P48664 564 aa13.12□□□□□ -0.31
TTC39A-202ENST00000262676 PPM1LQ5SGD2 360 aa13.12□□□□□ -0.31
TTC39A-202ENST00000262676 MZT2AQ6P582 158 aa13.12□□□□□ -0.31
TTC39A-202ENST00000262676 OTOP2Q7RTS6 562 aa13.12□□□□□ -0.31
TTC39A-202ENST00000262676 TRAPPC11Q7Z392 1133 aa13.12□□□□□ -0.31
TTC39A-202ENST00000262676 SPIRE2Q8WWL2 714 aa13.12□□□□□ -0.31
TTC39A-202ENST00000262676 CCDC3Q9BQI4 270 aa13.12□□□□□ -0.31
TTC39A-202ENST00000262676 DPY30Q9C005 99 aa13.12□□□□□ -0.31
TTC39A-202ENST00000262676 EPB41L1Q9H4G0 881 aa13.12□□□□□ -0.31
TTC39A-202ENST00000262676 ABCB10Q9NRK6 738 aa13.12□□□□□ -0.31
TTC39A-202ENST00000262676 LYVE1Q9Y5Y7 322 aa13.12□□□□□ -0.31
TTC39A-202ENST00000262676 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.11□□□□□ -0.31
TTC39A-202ENST00000262676 CCDC154A6NI56 674 aa13.11□□□□□ -0.31
TTC39A-202ENST00000262676 TRIM3O75382 744 aaPredicted RBP13.11□□□□□ -0.31
TTC39A-202ENST00000262676 CCDC130P13994 396 aa13.11□□□□□ -0.31
TTC39A-202ENST00000262676 JAK1P23458 1154 aa13.11□□□□□ -0.31
TTC39A-202ENST00000262676 SLC34A1Q06495 639 aa13.11□□□□□ -0.31
TTC39A-202ENST00000262676 ZNF177Q13360 481 aaPredicted RBP13.11□□□□□ -0.31
TTC39A-202ENST00000262676 KYQ8NBH2 561 aa13.11□□□□□ -0.31
TTC39A-202ENST00000262676 PNMA5Q96PV4 448 aa13.11□□□□□ -0.31
TTC39A-202ENST00000262676 PAFAH2Q99487 392 aa13.11□□□□□ -0.31
TTC39A-202ENST00000262676 ELOVL6Q9H5J4 265 aa13.11□□□□□ -0.31
TTC39A-202ENST00000262676 RXFP1Q9HBX9 757 aa13.11□□□□□ -0.31
TTC39A-202ENST00000262676 UBA2Q9UBT2 640 aaPredicted RBP13.11□□□□□ -0.31
TTC39A-202ENST00000262676 CYB561D2O14569 222 aa13.11□□□□□ -0.31
TTC39A-202ENST00000262676 SCAMP3O14828 347 aaKnown RBP13.11□□□□□ -0.31
TTC39A-202ENST00000262676 SLURP2P0DP57 97 aa13.11□□□□□ -0.31
TTC39A-202ENST00000262676 PTPRAP18433 802 aa13.11□□□□□ -0.31
TTC39A-202ENST00000262676 ACO1P21399 889 aaKnown RBP13.11□□□□□ -0.31
TTC39A-202ENST00000262676 PSEN2P49810 448 aa13.11□□□□□ -0.31
TTC39A-202ENST00000262676 NR1D2Q14995 579 aa13.11□□□□□ -0.31
TTC39A-202ENST00000262676 LRRC74BQ6ZQY2 392 aa13.11□□□□□ -0.31
TTC39A-202ENST00000262676 RNF44Q7L0R7 432 aa13.11□□□□□ -0.31
TTC39A-202ENST00000262676 USP7Q93009 1102 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms