RNA–Protein interactions for RNA: ENST00000261963.11

MCF2L-201, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best)

Gene MCF2L, Length 2,419 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-201ENST00000261963 BMPR2Q13873 1038 aa23.22■■□□□ 1.31
MCF2L-201ENST00000261963 ACAD11Q709F0 780 aa23.22■■□□□ 1.31
MCF2L-201ENST00000261963 STRADAQ7RTN6 431 aa23.22■■□□□ 1.31
MCF2L-201ENST00000261963 TTC7BQ86TV6 843 aa23.22■■□□□ 1.31
MCF2L-201ENST00000261963 OSTM1Q86WC4 334 aa23.22■■□□□ 1.31
MCF2L-201ENST00000261963 FAM131BQ86XD5 332 aa23.22■■□□□ 1.31
MCF2L-201ENST00000261963 LENG1Q96BZ8 264 aaPredicted RBP23.22■■□□□ 1.31
MCF2L-201ENST00000261963 TTC1Q99614 292 aa23.22■■□□□ 1.31
MCF2L-201ENST00000261963 MAD1L1Q9Y6D9 718 aa23.22■■□□□ 1.31
MCF2L-201ENST00000261963 FAM159BA6NKW6 160 aa23.21■■□□□ 1.31
MCF2L-201ENST00000261963 OPHN1O60890 802 aa23.21■■□□□ 1.31
MCF2L-201ENST00000261963 COQ9O75208 318 aa23.21■■□□□ 1.31
MCF2L-201ENST00000261963 DGKIO75912 1065 aa23.21■■□□□ 1.31
MCF2L-201ENST00000261963 DLDP09622 509 aaKnown RBP23.21■■□□□ 1.31
MCF2L-201ENST00000261963 SPATA31D3P0C874 917 aa23.21■■□□□ 1.31
MCF2L-201ENST00000261963 KCNE1P15382 129 aa23.21■■□□□ 1.31
MCF2L-201ENST00000261963 CCNFP41002 786 aa23.21■■□□□ 1.31
MCF2L-201ENST00000261963 CPA2P48052 419 aa23.21■■□□□ 1.31
MCF2L-201ENST00000261963 MRPS5P82675 430 aaKnown RBP23.21■■□□□ 1.31
MCF2L-201ENST00000261963 OTUD1Q5VV17 481 aaPredicted RBP23.21■■□□□ 1.31
MCF2L-201ENST00000261963 FAM91A1Q658Y4 838 aa23.21■■□□□ 1.31
MCF2L-201ENST00000261963 SPATA31D4Q6ZUB0 917 aa23.21■■□□□ 1.31
MCF2L-201ENST00000261963 SPATA24Q86W54 205 aa23.21■■□□□ 1.31
MCF2L-201ENST00000261963 APPL2Q8NEU8 664 aa23.21■■□□□ 1.31
MCF2L-201ENST00000261963 ZNF560Q96MR9 790 aa23.21■■□□□ 1.31
MCF2L-201ENST00000261963 PLEKHG4BQ96PX9 1271 aa23.21■■□□□ 1.31
MCF2L-201ENST00000261963 ARHGEF4Q9NR80 690 aa23.21■■□□□ 1.31
MCF2L-201ENST00000261963 GNEQ9Y223 722 aaKnown RBP23.21■■□□□ 1.31
MCF2L-201ENST00000261963 HMX2A2RU54 273 aa23.21■■□□□ 1.31
MCF2L-201ENST00000261963 TOMM70O94826 608 aa23.21■■□□□ 1.31
MCF2L-201ENST00000261963 FAM200BP0CF97 657 aa23.21■■□□□ 1.31
MCF2L-201ENST00000261963 AXLP30530 894 aa23.21■■□□□ 1.31
MCF2L-201ENST00000261963 MATKP42679 507 aa23.21■■□□□ 1.31
MCF2L-201ENST00000261963 TAF6P49848 677 aa23.21■■□□□ 1.31
MCF2L-201ENST00000261963 PITX1P78337 314 aaPredicted RBP23.21■■□□□ 1.31
MCF2L-201ENST00000261963 SH2D4BQ5SQS7 431 aa23.21■■□□□ 1.31
MCF2L-201ENST00000261963 DEFB106AQ8N104 65 aa23.21■■□□□ 1.31
MCF2L-201ENST00000261963 ARRDC4Q8NCT1 418 aa23.21■■□□□ 1.31
MCF2L-201ENST00000261963 GSDMBQ8TAX9 411 aa23.21■■□□□ 1.31
MCF2L-201ENST00000261963 FZD10Q9ULW2 581 aa23.21■■□□□ 1.31
MCF2L-201ENST00000261963 H3BRJ5 948 aa23.2■■□□□ 1.3
MCF2L-201ENST00000261963 MAGEA8P43361 318 aa23.2■■□□□ 1.3
MCF2L-201ENST00000261963 ACTR3P61158 418 aa23.2■■□□□ 1.3
MCF2L-201ENST00000261963 USP46P62068 366 aa23.2■■□□□ 1.3
MCF2L-201ENST00000261963 HEATR6Q6AI08 1181 aaKnown RBP23.2■■□□□ 1.3
MCF2L-201ENST00000261963 PIGZQ86VD9 579 aa23.2■■□□□ 1.3
MCF2L-201ENST00000261963 ADGRF2Q8IZF7 708 aa23.2■■□□□ 1.3
MCF2L-201ENST00000261963 PANX3Q96QZ0 392 aa23.2■■□□□ 1.3
MCF2L-201ENST00000261963 EBF3Q9H4W6 596 aa23.2■■□□□ 1.3
MCF2L-201ENST00000261963 ARMCX1Q9P291 453 aa23.2■■□□□ 1.3
MCF2L-201ENST00000261963 PLLPQ9Y342 182 aa23.2■■□□□ 1.3
MCF2L-201ENST00000261963 PDCD11Q14690 1871 aaKnown RBP23.2■■□□□ 1.3
MCF2L-201ENST00000261963 XPO1O14980 1071 aaKnown RBP23.2■■□□□ 1.3
MCF2L-201ENST00000261963 PNPLA4P41247 253 aa23.2■■□□□ 1.3
MCF2L-201ENST00000261963 DENND5BQ6ZUT9 1274 aa23.2■■□□□ 1.3
MCF2L-201ENST00000261963 HTR3CQ8WXA8 447 aa23.2■■□□□ 1.3
MCF2L-201ENST00000261963 LGMNQ99538 433 aa23.2■■□□□ 1.3
MCF2L-201ENST00000261963 XAB2Q9HCS7 855 aaKnown RBP23.2■■□□□ 1.3
MCF2L-201ENST00000261963 UNCXA6NJT0 531 aa23.19■■□□□ 1.3
MCF2L-201ENST00000261963 IL1BP01584 269 aa23.19■■□□□ 1.3
MCF2L-201ENST00000261963 ASLP04424 464 aa23.19■■□□□ 1.3
MCF2L-201ENST00000261963 MYL2P10916 166 aa23.19■■□□□ 1.3
MCF2L-201ENST00000261963 ADIGQ0VDE8 80 aa23.19■■□□□ 1.3
MCF2L-201ENST00000261963 HNRNPDQ14103 355 aaKnown RBP23.19■■□□□ 1.3
MCF2L-201ENST00000261963 MFSD10Q14728 455 aa23.19■■□□□ 1.3
MCF2L-201ENST00000261963 FAM110CQ1W6H9 321 aa23.19■■□□□ 1.3
MCF2L-201ENST00000261963 SLC25A52Q3SY17 297 aa23.19■■□□□ 1.3
MCF2L-201ENST00000261963 EFHC1Q5JVL4 640 aa23.19■■□□□ 1.3
MCF2L-201ENST00000261963 PTPN18Q99952 460 aa23.19■■□□□ 1.3
MCF2L-201ENST00000261963 GPAMQ9HCL2 828 aa23.19■■□□□ 1.3
MCF2L-201ENST00000261963 TMPRSS4Q9NRS4 437 aa23.19■■□□□ 1.3
MCF2L-201ENST00000261963 PCDHA11Q9Y5I1 949 aa23.19■■□□□ 1.3
MCF2L-201ENST00000261963 GMEB1Q9Y692 573 aa23.19■■□□□ 1.3
MCF2L-201ENST00000261963 C2orf71A6NGG8 1288 aa23.19■■□□□ 1.3
MCF2L-201ENST00000261963 KLF11O14901 512 aa23.19■■□□□ 1.3
MCF2L-201ENST00000261963 TREHO43280 583 aa23.19■■□□□ 1.3
MCF2L-201ENST00000261963 TM7SF2O76062 418 aa23.19■■□□□ 1.3
MCF2L-201ENST00000261963 SULT1E1P49888 294 aa23.19■■□□□ 1.3
MCF2L-201ENST00000261963 LGSNQ5TDP6 509 aa23.19■■□□□ 1.3
MCF2L-201ENST00000261963 NETO2Q8NC67 525 aa23.19■■□□□ 1.3
MCF2L-201ENST00000261963 B3GALNT2Q8NCR0 500 aa23.19■■□□□ 1.3
MCF2L-201ENST00000261963 TFB1MQ8WVM0 346 aaKnown RBP23.19■■□□□ 1.3
MCF2L-201ENST00000261963 MECRQ9BV79 373 aa23.19■■□□□ 1.3
MCF2L-201ENST00000261963 NMUR2Q9GZQ4 415 aa23.19■■□□□ 1.3
MCF2L-201ENST00000261963 MKS1Q9NXB0 559 aa23.19■■□□□ 1.3
MCF2L-201ENST00000261963 A0A0A0MRY4 1105 aa23.18■■□□□ 1.3
MCF2L-201ENST00000261963 F5H423 210 aaPredicted RBP23.18■■□□□ 1.3
MCF2L-201ENST00000261963 MFSD11O43934 449 aa23.18■■□□□ 1.3
MCF2L-201ENST00000261963 ERFP50548 548 aa23.18■■□□□ 1.3
MCF2L-201ENST00000261963 INHBCP55103 352 aa23.18■■□□□ 1.3
MCF2L-201ENST00000261963 LILRA4P59901 499 aa23.18■■□□□ 1.3
MCF2L-201ENST00000261963 FAM149B1Q96BN6 582 aa23.18■■□□□ 1.3
MCF2L-201ENST00000261963 SPATA13Q96N96 652 aa23.18■■□□□ 1.3
MCF2L-201ENST00000261963 IQCGQ9H095 443 aaKnown RBP23.18■■□□□ 1.3
MCF2L-201ENST00000261963 SMIM31A0A1B0GVY4 71 aa23.18■■□□□ 1.3
MCF2L-201ENST00000261963 CLDN5O00501 218 aa23.18■■□□□ 1.3
MCF2L-201ENST00000261963 BEST1O76090 585 aa23.18■■□□□ 1.3
MCF2L-201ENST00000261963 USP1O94782 785 aa23.18■■□□□ 1.3
MCF2L-201ENST00000261963 ARL4AP40617 200 aa23.18■■□□□ 1.3
MCF2L-201ENST00000261963 SV2CQ496J9 727 aa23.18■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms