RNA–Protein interactions for RNA: ENST00000260563.4

RTCA-201, Transcript of RNA 3'-terminal phosphate cyclase, humanhuman

TSL 1 (best) BASIC

Gene RTCA, Length 1,534 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTCA-201ENST00000260563 GAD2Q05329 585 aa21.35■■□□□ 1.01
RTCA-201ENST00000260563 MPPE1Q53F39 396 aa21.35■■□□□ 1.01
RTCA-201ENST00000260563 SEL1L2Q5TEA6 688 aa21.35■■□□□ 1.01
RTCA-201ENST00000260563 TMEM25Q86YD3 366 aa21.35■■□□□ 1.01
RTCA-201ENST00000260563 CREG2Q8IUH2 290 aa21.35■■□□□ 1.01
RTCA-201ENST00000260563 RCOR2Q8IZ40 523 aa21.35■■□□□ 1.01
RTCA-201ENST00000260563 LGI2Q8N0V4 545 aa21.35■■□□□ 1.01
RTCA-201ENST00000260563 DDI1Q8WTU0 396 aa21.35■■□□□ 1.01
RTCA-201ENST00000260563 RBM41Q96IZ5 413 aaKnown RBP21.35■■□□□ 1.01
RTCA-201ENST00000260563 C1orf74Q96LT6 269 aa21.35■■□□□ 1.01
RTCA-201ENST00000260563 PRICKLE1Q96MT3 831 aaPredicted RBP21.35■■□□□ 1.01
RTCA-201ENST00000260563 BBS2Q9BXC9 721 aa21.35■■□□□ 1.01
RTCA-201ENST00000260563 HEBP1Q9NRV9 189 aa21.35■■□□□ 1.01
RTCA-201ENST00000260563 STAU2Q9NUL3 570 aaKnown RBP eCLIP21.35■■□□□ 1.01
RTCA-201ENST00000260563 VANGL2Q9ULK5 521 aa21.35■■□□□ 1.01
RTCA-201ENST00000260563 NCOR1O75376 2440 aa21.35■■□□□ 1.01
RTCA-201ENST00000260563 AUHQ13825 339 aaKnown RBP21.34■■□□□ 1.01
RTCA-201ENST00000260563 WHAMMP3Q1A5X7 153 aa21.34■■□□□ 1.01
RTCA-201ENST00000260563 RABGAP1LQ5R372 815 aa21.34■■□□□ 1.01
RTCA-201ENST00000260563 AADACL2Q6P093 401 aa21.34■■□□□ 1.01
RTCA-201ENST00000260563 CCDC50Q8IVM0 306 aa21.34■■□□□ 1.01
RTCA-201ENST00000260563 RASGEF1CQ8N431 466 aa21.34■■□□□ 1.01
RTCA-201ENST00000260563 KCTD6Q8NC69 237 aa21.34■■□□□ 1.01
RTCA-201ENST00000260563 HJURPQ8NCD3 748 aaPredicted RBP21.34■■□□□ 1.01
RTCA-201ENST00000260563 RAPGEF5Q92565 580 aa21.34■■□□□ 1.01
RTCA-201ENST00000260563 BHMTQ93088 406 aa21.34■■□□□ 1.01
RTCA-201ENST00000260563 MS4A14Q96JA4 679 aa21.34■■□□□ 1.01
RTCA-201ENST00000260563 L2HGDHQ9H9P8 463 aa21.34■■□□□ 1.01
RTCA-201ENST00000260563 FBXL21Q9UKT6 434 aa21.34■■□□□ 1.01
RTCA-201ENST00000260563 SNX10Q9Y5X0 201 aa21.34■■□□□ 1.01
RTCA-201ENST00000260563 LRRD1A4D1F6 860 aa21.34■■□□□ 1.01
RTCA-201ENST00000260563 GFRA2O00451 464 aa21.34■■□□□ 1.01
RTCA-201ENST00000260563 HOXC11O43248 304 aaPredicted RBP21.34■■□□□ 1.01
RTCA-201ENST00000260563 SGSHP51688 502 aa21.34■■□□□ 1.01
RTCA-201ENST00000260563 MLLT6P55198 1093 aaPredicted RBP21.34■■□□□ 1.01
RTCA-201ENST00000260563 CCDC181Q5TID7 509 aa21.34■■□□□ 1.01
RTCA-201ENST00000260563 TTC39BQ5VTQ0 682 aaPredicted RBP21.34■■□□□ 1.01
RTCA-201ENST00000260563 FYB2Q5VWT5 728 aa21.34■■□□□ 1.01
RTCA-201ENST00000260563 FBXL22Q6P050 247 aa21.34■■□□□ 1.01
RTCA-201ENST00000260563 LRRC31Q6UY01 552 aa21.34■■□□□ 1.01
RTCA-201ENST00000260563 PSTKQ8IV42 348 aaKnown RBP21.34■■□□□ 1.01
RTCA-201ENST00000260563 RNF25Q96BH1 459 aaPredicted RBP21.34■■□□□ 1.01
RTCA-201ENST00000260563 TMA16Q96EY4 203 aaKnown RBP21.34■■□□□ 1.01
RTCA-201ENST00000260563 RPRD1AQ96P16 312 aaPredicted RBP21.34■■□□□ 1.01
RTCA-201ENST00000260563 OSBPL2Q9H1P3 480 aa21.34■■□□□ 1.01
RTCA-201ENST00000260563 C8orf33Q9H7E9 229 aaPredicted RBP21.34■■□□□ 1.01
RTCA-201ENST00000260563 GPATCH2LQ9NWQ4 482 aa21.34■■□□□ 1.01
RTCA-201ENST00000260563 RNF14Q9UBS8 474 aa21.34■■□□□ 1.01
RTCA-201ENST00000260563 OR12D3Q9UGF7 316 aa21.34■■□□□ 1.01
RTCA-201ENST00000260563 PIAS3Q9Y6X2 628 aa21.34■■□□□ 1.01
RTCA-201ENST00000260563 MUC3AQ02505 3323 aa21.34■■□□□ 1.01
RTCA-201ENST00000260563 E9PAM4 449 aa21.33■■□□□ 1
RTCA-201ENST00000260563 PI4K2BG5E9Z4 385 aa21.33■■□□□ 1
RTCA-201ENST00000260563 TYRP14679 529 aa21.33■■□□□ 1
RTCA-201ENST00000260563 KDELR1P24390 212 aa21.33■■□□□ 1
RTCA-201ENST00000260563 GJA4P35212 333 aa21.33■■□□□ 1
RTCA-201ENST00000260563 SOX9P48436 509 aa21.33■■□□□ 1
RTCA-201ENST00000260563 CDH6P55285 790 aa21.33■■□□□ 1
RTCA-201ENST00000260563 NRG1Q02297 640 aaPredicted RBP21.33■■□□□ 1
RTCA-201ENST00000260563 CA9Q16790 459 aa21.33■■□□□ 1
RTCA-201ENST00000260563 ACTRT1Q8TDG2 376 aa21.33■■□□□ 1
RTCA-201ENST00000260563 MSANTD3Q96H12 275 aa21.33■■□□□ 1
RTCA-201ENST00000260563 DHX35Q9H5Z1 703 aaKnown RBP21.33■■□□□ 1
RTCA-201ENST00000260563 PLK2Q9NYY3 685 aa21.33■■□□□ 1
RTCA-201ENST00000260563 TTC7AQ9ULT0 858 aaPredicted RBP21.33■■□□□ 1
RTCA-201ENST00000260563 CA14Q9ULX7 337 aa21.33■■□□□ 1
RTCA-201ENST00000260563 TBL1XO60907 577 aa21.32■■□□□ 1
RTCA-201ENST00000260563 PENKP01210 267 aaPredicted RBP21.32■■□□□ 1
RTCA-201ENST00000260563 CETN2P41208 172 aa21.32■■□□□ 1
RTCA-201ENST00000260563 ARSEP51690 589 aa21.32■■□□□ 1
RTCA-201ENST00000260563 COPS2P61201 443 aa21.32■■□□□ 1
RTCA-201ENST00000260563 ZXDAP98168 799 aa21.32■■□□□ 1
RTCA-201ENST00000260563 KRT81Q14533 505 aa21.32■■□□□ 1
RTCA-201ENST00000260563 PDK2Q15119 407 aa21.32■■□□□ 1
RTCA-201ENST00000260563 MLF2Q15773 248 aaPredicted RBP21.32■■□□□ 1
RTCA-201ENST00000260563 DPYSL2Q16555 572 aa21.32■■□□□ 1
RTCA-201ENST00000260563 MFSD7Q6UXD7 560 aa21.32■■□□□ 1
RTCA-201ENST00000260563 C14orf80Q86SX3 495 aa21.32■■□□□ 1
RTCA-201ENST00000260563 PYROXD2Q8N2H3 581 aa21.32■■□□□ 1
RTCA-201ENST00000260563 MYEOVQ96EZ4 313 aa21.32■■□□□ 1
RTCA-201ENST00000260563 XPO6Q96QU8 1125 aaKnown RBP21.32■■□□□ 1
RTCA-201ENST00000260563 EPAS1Q99814 870 aa21.32■■□□□ 1
RTCA-201ENST00000260563 ARHGEF3Q9NR81 526 aa21.32■■□□□ 1
RTCA-201ENST00000260563 WNT16Q9UBV4 365 aa21.32■■□□□ 1
RTCA-201ENST00000260563 C3orf70A6NLC5 250 aaPredicted RBP21.31■■□□□ 1
RTCA-201ENST00000260563 SPECC1L-ADORA2AF8WAN1 911 aa21.31■■□□□ 1
RTCA-201ENST00000260563 DCXO43602 365 aa21.31■■□□□ 1
RTCA-201ENST00000260563 CD48P09326 243 aa21.31■■□□□ 1
RTCA-201ENST00000260563 GLULP15104 373 aa21.31■■□□□ 1
RTCA-201ENST00000260563 HOXD9P28356 352 aaPredicted RBP21.31■■□□□ 1
RTCA-201ENST00000260563 CTHP32929 405 aa21.31■■□□□ 1
RTCA-201ENST00000260563 PAFAH1B1P43034 410 aa21.31■■□□□ 1
RTCA-201ENST00000260563 RPS24P62847 133 aaKnown RBP21.31■■□□□ 1
RTCA-201ENST00000260563 CKAP4Q07065 602 aaKnown RBP21.31■■□□□ 1
RTCA-201ENST00000260563 SLC44A4Q53GD3 710 aa21.31■■□□□ 1
RTCA-201ENST00000260563 MPP7Q5T2T1 576 aa21.31■■□□□ 1
RTCA-201ENST00000260563 SPOCD1Q6ZMY3 1216 aa21.31■■□□□ 1
RTCA-201ENST00000260563 TPRG1Q6ZUI0 275 aa21.31■■□□□ 1
RTCA-201ENST00000260563 RALGPS2Q86X27 583 aaPredicted RBP21.31■■□□□ 1
RTCA-201ENST00000260563 MAP7D3Q8IWC1 876 aa21.31■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms