RNA–Protein interactions for RNA: ENST00000260054.8

CCDC90B-201, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 2

Gene CCDC90B, Length 1,688 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-201ENST00000260054 hCG_1818297A0A087WSY0 165 aa16.3■□□□□ 0.2
CCDC90B-201ENST00000260054 CNTN5O94779 1100 aa16.3■□□□□ 0.2
CCDC90B-201ENST00000260054 TUBB4AP04350 444 aa16.3■□□□□ 0.2
CCDC90B-201ENST00000260054 KRT10P13645 584 aa16.3■□□□□ 0.2
CCDC90B-201ENST00000260054 IFNAR2P48551 515 aa16.3■□□□□ 0.2
CCDC90B-201ENST00000260054 HCAR3P49019 387 aa16.3■□□□□ 0.2
CCDC90B-201ENST00000260054 ZNF135P52742 658 aaPredicted RBP16.3■□□□□ 0.2
CCDC90B-201ENST00000260054 DPYSQ14117 519 aa16.3■□□□□ 0.2
CCDC90B-201ENST00000260054 GLIPR1L2Q4G1C9 344 aa16.3■□□□□ 0.2
CCDC90B-201ENST00000260054 ALFQ53S48 1182 aa16.3■□□□□ 0.2
CCDC90B-201ENST00000260054 ANKRD20A8PQ5CZ79 823 aa16.3■□□□□ 0.2
CCDC90B-201ENST00000260054 TFDP3Q5H9I0 405 aa16.3■□□□□ 0.2
CCDC90B-201ENST00000260054 TMEM25Q86YD3 366 aa16.3■□□□□ 0.2
CCDC90B-201ENST00000260054 PCDH19Q8TAB3 1148 aa16.3■□□□□ 0.2
CCDC90B-201ENST00000260054 COG1Q8WTW3 980 aa16.3■□□□□ 0.2
CCDC90B-201ENST00000260054 ZNF592Q92610 1267 aa16.3■□□□□ 0.2
CCDC90B-201ENST00000260054 HERPUD2Q9BSE4 406 aa16.3■□□□□ 0.2
CCDC90B-201ENST00000260054 KCNK12Q9HB15 430 aa16.3■□□□□ 0.2
CCDC90B-201ENST00000260054 ARHGEF4Q9NR80 690 aa16.3■□□□□ 0.2
CCDC90B-201ENST00000260054 PPARGC1AQ9UBK2 798 aaKnown RBP16.3■□□□□ 0.2
CCDC90B-201ENST00000260054 ZNF487B1APH4 448 aa16.29■□□□□ 0.2
CCDC90B-201ENST00000260054 LOC730098B7Z3J9 87 aa16.29■□□□□ 0.2
CCDC90B-201ENST00000260054 RRP9O43818 475 aaKnown RBP16.29■□□□□ 0.2
CCDC90B-201ENST00000260054 ARSAP15289 507 aa16.29■□□□□ 0.2
CCDC90B-201ENST00000260054 AMPD1P23109 780 aa16.29■□□□□ 0.2
CCDC90B-201ENST00000260054 HTR7P34969 479 aa16.29■□□□□ 0.2
CCDC90B-201ENST00000260054 COPS2P61201 443 aa16.29■□□□□ 0.2
CCDC90B-201ENST00000260054 TNK2Q07912 1038 aa16.29■□□□□ 0.2
CCDC90B-201ENST00000260054 ADCY2Q08462 1091 aa16.29■□□□□ 0.2
CCDC90B-201ENST00000260054 PPP2R5EQ16537 467 aa16.29■□□□□ 0.2
CCDC90B-201ENST00000260054 AAK1Q2M2I8 961 aa16.29■□□□□ 0.2
CCDC90B-201ENST00000260054 RABGAP1LQ5R372 815 aa16.29■□□□□ 0.2
CCDC90B-201ENST00000260054 LY6G5CQ5SRR4 150 aa16.29■□□□□ 0.2
CCDC90B-201ENST00000260054 YAF2Q8IY57 180 aa16.29■□□□□ 0.2
CCDC90B-201ENST00000260054 BHMTQ93088 406 aa16.29■□□□□ 0.2
CCDC90B-201ENST00000260054 TMA16Q96EY4 203 aaKnown RBP16.29■□□□□ 0.2
CCDC90B-201ENST00000260054 RNF157Q96PX1 679 aa16.29■□□□□ 0.2
CCDC90B-201ENST00000260054 TRMT61BQ9BVS5 477 aaKnown RBP16.29■□□□□ 0.2
CCDC90B-201ENST00000260054 ZYG11BQ9C0D3 744 aa16.29■□□□□ 0.2
CCDC90B-201ENST00000260054 EBF3Q9H4W6 596 aa16.29■□□□□ 0.2
CCDC90B-201ENST00000260054 HPS4Q9NQG7 708 aa16.29■□□□□ 0.2
CCDC90B-201ENST00000260054 SPHK2Q9NRA0 654 aa16.29■□□□□ 0.2
CCDC90B-201ENST00000260054 ETNK2Q9NVF9 386 aa16.29■□□□□ 0.2
CCDC90B-201ENST00000260054 ZNF185O15231 689 aa16.28■□□□□ 0.2
CCDC90B-201ENST00000260054 DAPK3O43293 454 aa16.28■□□□□ 0.2
CCDC90B-201ENST00000260054 TBL1XO60907 577 aa16.28■□□□□ 0.2
CCDC90B-201ENST00000260054 CYP17A1P05093 508 aa16.28■□□□□ 0.2
CCDC90B-201ENST00000260054 ASGR2P07307 311 aa16.28■□□□□ 0.2
CCDC90B-201ENST00000260054 PRLRP16471 622 aa16.28■□□□□ 0.2
CCDC90B-201ENST00000260054 TCP1P17987 556 aaKnown RBP16.28■□□□□ 0.2
CCDC90B-201ENST00000260054 ERCC2P18074 760 aa16.28■□□□□ 0.2
CCDC90B-201ENST00000260054 GDI1P31150 447 aa16.28■□□□□ 0.2
CCDC90B-201ENST00000260054 PTPN7P35236 360 aa16.28■□□□□ 0.2
CCDC90B-201ENST00000260054 PDGFRLQ15198 375 aa16.28■□□□□ 0.2
CCDC90B-201ENST00000260054 DHCR24Q15392 516 aa16.28■□□□□ 0.2
CCDC90B-201ENST00000260054 MPPE1Q53F39 396 aa16.28■□□□□ 0.2
CCDC90B-201ENST00000260054 SEL1L2Q5TEA6 688 aa16.28■□□□□ 0.2
CCDC90B-201ENST00000260054 FYB2Q5VWT5 728 aa16.28■□□□□ 0.2
CCDC90B-201ENST00000260054 KAZNQ674X7 775 aa16.28■□□□□ 0.2
CCDC90B-201ENST00000260054 RHBDF2Q6PJF5 856 aa16.28■□□□□ 0.2
CCDC90B-201ENST00000260054 NLRP14Q86W24 1093 aa16.28■□□□□ 0.2
CCDC90B-201ENST00000260054 PQLC3Q8N755 202 aa16.28■□□□□ 0.2
CCDC90B-201ENST00000260054 DDI1Q8WTU0 396 aa16.28■□□□□ 0.2
CCDC90B-201ENST00000260054 IRF7Q92985 503 aa16.28■□□□□ 0.2
CCDC90B-201ENST00000260054 HEMGNQ9BXL5 484 aa16.28■□□□□ 0.2
CCDC90B-201ENST00000260054 OSBPL8Q9BZF1 889 aa16.28■□□□□ 0.2
CCDC90B-201ENST00000260054 PLK2Q9NYY3 685 aa16.28■□□□□ 0.2
CCDC90B-201ENST00000260054 ZNF212Q9UDV6 495 aa16.28■□□□□ 0.2
CCDC90B-201ENST00000260054 MFHAS1Q9Y4C4 1052 aa16.28■□□□□ 0.2
CCDC90B-201ENST00000260054 SAR1BQ9Y6B6 198 aa16.28■□□□□ 0.2
CCDC90B-201ENST00000260054 OTOL1A6NHN0 477 aaPredicted RBP16.27■□□□□ 0.2
CCDC90B-201ENST00000260054 ARNTLO00327 626 aa16.27■□□□□ 0.2
CCDC90B-201ENST00000260054 DCLK1O15075 740 aa16.27■□□□□ 0.2
CCDC90B-201ENST00000260054 CHADO15335 359 aa16.27■□□□□ 0.2
CCDC90B-201ENST00000260054 FGF10O15520 208 aaPredicted RBP16.27■□□□□ 0.2
CCDC90B-201ENST00000260054 CEP104O60308 925 aa16.27■□□□□ 0.2
CCDC90B-201ENST00000260054 RHOQP17081 205 aa16.27■□□□□ 0.2
CCDC90B-201ENST00000260054 TFAP2DQ7Z6R9 452 aa16.27■□□□□ 0.2
CCDC90B-201ENST00000260054 RFX6Q8HWS3 928 aa16.27■□□□□ 0.2
CCDC90B-201ENST00000260054 ADHFE1Q8IWW8 467 aa16.27■□□□□ 0.2
CCDC90B-201ENST00000260054 HJURPQ8NCD3 748 aaPredicted RBP16.27■□□□□ 0.2
CCDC90B-201ENST00000260054 PBKQ96KB5 322 aa16.27■□□□□ 0.2
CCDC90B-201ENST00000260054 NDFIP2Q9NV92 336 aa16.27■□□□□ 0.2
CCDC90B-201ENST00000260054 STIM2Q9P246 746 aa16.27■□□□□ 0.2
CCDC90B-201ENST00000260054 IGSF9Q9P2J2 1179 aa16.27■□□□□ 0.2
CCDC90B-201ENST00000260054 NFATC1O95644 943 aa16.27■□□□□ 0.19
CCDC90B-201ENST00000260054 PENKP01210 267 aaPredicted RBP16.27■□□□□ 0.19
CCDC90B-201ENST00000260054 CYBBP04839 570 aa16.27■□□□□ 0.19
CCDC90B-201ENST00000260054 HOXD9P28356 352 aaPredicted RBP16.27■□□□□ 0.19
CCDC90B-201ENST00000260054 ZP2Q05996 745 aa16.27■□□□□ 0.19
CCDC90B-201ENST00000260054 ANO4Q32M45 955 aa16.27■□□□□ 0.19
CCDC90B-201ENST00000260054 MPP7Q5T2T1 576 aa16.27■□□□□ 0.19
CCDC90B-201ENST00000260054 TTC39BQ5VTQ0 682 aaPredicted RBP16.27■□□□□ 0.19
CCDC90B-201ENST00000260054 NCBP2-AS2Q69YL0 99 aa16.27■□□□□ 0.19
CCDC90B-201ENST00000260054 SLC9A4Q6AI14 798 aa16.27■□□□□ 0.19
CCDC90B-201ENST00000260054 RASGEF1CQ8N431 466 aa16.27■□□□□ 0.19
CCDC90B-201ENST00000260054 SLC44A3Q8N4M1 653 aa16.27■□□□□ 0.19
CCDC90B-201ENST00000260054 PLD5Q8N7P1 536 aa16.27■□□□□ 0.19
CCDC90B-201ENST00000260054 RTL3Q8N8U3 475 aaKnown RBP16.27■□□□□ 0.19
CCDC90B-201ENST00000260054 ATP2A3Q93084 1043 aa16.27■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms