RNA–Protein interactions for RNA: ENST00000258909.13

TM6SF1-201, Transcript of transmembrane 6 superfamily member 1, humanhuman

TSL 1 (best)

Gene TM6SF1, Length 1,469 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM6SF1-201ENST00000258909 CHSY1Q86X52 802 aa19.69■□□□□ 0.74
TM6SF1-201ENST00000258909 SHC3Q92529 594 aa19.69■□□□□ 0.74
TM6SF1-201ENST00000258909 TTC17Q96AE7 1141 aa19.69■□□□□ 0.74
TM6SF1-201ENST00000258909 CPXM1Q96SM3 734 aa19.69■□□□□ 0.74
TM6SF1-201ENST00000258909 SCNM1Q9BWG6 230 aa19.69■□□□□ 0.74
TM6SF1-201ENST00000258909 THAP9Q9H5L6 903 aa19.69■□□□□ 0.74
TM6SF1-201ENST00000258909 COX16Q9P0S2 106 aa19.69■□□□□ 0.74
TM6SF1-201ENST00000258909 SUN2Q9UH99 717 aa19.69■□□□□ 0.74
TM6SF1-201ENST00000258909 WDFY3Q8IZQ1 3526 aa19.68■□□□□ 0.74
TM6SF1-201ENST00000258909 H0Y626 953 aa19.68■□□□□ 0.74
TM6SF1-201ENST00000258909 BCAT2O15382 392 aaPredicted RBP19.68■□□□□ 0.74
TM6SF1-201ENST00000258909 HYAL3O43820 417 aaPredicted RBP19.68■□□□□ 0.74
TM6SF1-201ENST00000258909 GRAP2O75791 330 aa19.68■□□□□ 0.74
TM6SF1-201ENST00000258909 LUC7L3O95232 432 aaKnown RBP19.68■□□□□ 0.74
TM6SF1-201ENST00000258909 DNTTP04053 509 aa19.68■□□□□ 0.74
TM6SF1-201ENST00000258909 PNMA6AP0CW24 399 aaPredicted RBP19.68■□□□□ 0.74
TM6SF1-201ENST00000258909 TACR2P21452 398 aa19.68■□□□□ 0.74
TM6SF1-201ENST00000258909 ST8SIA6P61647 398 aa19.68■□□□□ 0.74
TM6SF1-201ENST00000258909 TPD52L1Q16890 204 aaPredicted RBP19.68■□□□□ 0.74
TM6SF1-201ENST00000258909 HSP90AA4PQ58FG1 418 aa19.68■□□□□ 0.74
TM6SF1-201ENST00000258909 CCDC117Q8IWD4 279 aaPredicted RBP19.68■□□□□ 0.74
TM6SF1-201ENST00000258909 ZNF557Q8N988 423 aaPredicted RBP19.68■□□□□ 0.74
TM6SF1-201ENST00000258909 MRGPRX3Q96LB0 322 aa19.68■□□□□ 0.74
TM6SF1-201ENST00000258909 FAM204AQ9H8W3 233 aa19.68■□□□□ 0.74
TM6SF1-201ENST00000258909 IL21RQ9HBE5 538 aa19.68■□□□□ 0.74
TM6SF1-201ENST00000258909 SIX2Q9NPC8 291 aa19.68■□□□□ 0.74
TM6SF1-201ENST00000258909 NFE2L3Q9Y4A8 694 aa19.68■□□□□ 0.74
TM6SF1-201ENST00000258909 SIN3BO75182 1162 aa19.67■□□□□ 0.74
TM6SF1-201ENST00000258909 IGLV3-25P01717 112 aa19.67■□□□□ 0.74
TM6SF1-201ENST00000258909 BNC1Q01954 994 aa19.67■□□□□ 0.74
TM6SF1-201ENST00000258909 PITRM1Q5JRX3 1037 aa19.67■□□□□ 0.74
TM6SF1-201ENST00000258909 CIR1Q86X95 450 aaPredicted RBP19.67■□□□□ 0.74
TM6SF1-201ENST00000258909 DHX40Q8IX18 779 aaKnown RBP19.67■□□□□ 0.74
TM6SF1-201ENST00000258909 APCDD1Q8J025 514 aa19.67■□□□□ 0.74
TM6SF1-201ENST00000258909 DEFB106AQ8N104 65 aa19.67■□□□□ 0.74
TM6SF1-201ENST00000258909 MLKLQ8NB16 471 aa19.67■□□□□ 0.74
TM6SF1-201ENST00000258909 PPP1R13BQ96KQ4 1090 aa19.67■□□□□ 0.74
TM6SF1-201ENST00000258909 FAM81BQ96LP2 452 aa19.67■□□□□ 0.74
TM6SF1-201ENST00000258909 TRIM62Q9BVG3 475 aa19.67■□□□□ 0.74
TM6SF1-201ENST00000258909 CHMP5Q9NZZ3 219 aa19.67■□□□□ 0.74
TM6SF1-201ENST00000258909 DNAJC12Q9UKB3 198 aa19.67■□□□□ 0.74
TM6SF1-201ENST00000258909 ZFHX4Q86UP3 3567 aa19.67■□□□□ 0.74
TM6SF1-201ENST00000258909 FAM170AA1A519 330 aa19.67■□□□□ 0.74
TM6SF1-201ENST00000258909 TTC34A8MYJ7 566 aa19.67■□□□□ 0.74
TM6SF1-201ENST00000258909 SEMA4FO95754 770 aa19.67■□□□□ 0.74
TM6SF1-201ENST00000258909 ZNF776Q68DI1 518 aaPredicted RBP19.67■□□□□ 0.74
TM6SF1-201ENST00000258909 UNQ6494/PRO21346Q6UXR6 183 aa19.67■□□□□ 0.74
TM6SF1-201ENST00000258909 C1orf131Q8NDD1 294 aaKnown RBP19.67■□□□□ 0.74
TM6SF1-201ENST00000258909 C1orf216Q8TAB5 229 aa19.67■□□□□ 0.74
TM6SF1-201ENST00000258909 GANCQ8TET4 914 aa19.67■□□□□ 0.74
TM6SF1-201ENST00000258909 BTN2A3PQ96KV6 586 aa19.67■□□□□ 0.74
TM6SF1-201ENST00000258909 ADAM33Q9BZ11 813 aa19.67■□□□□ 0.74
TM6SF1-201ENST00000258909 BTBD1Q9H0C5 482 aa19.67■□□□□ 0.74
TM6SF1-201ENST00000258909 PLCB1Q9NQ66 1216 aa19.67■□□□□ 0.74
TM6SF1-201ENST00000258909 ERVW-1Q9UQF0 538 aa19.67■□□□□ 0.74
TM6SF1-201ENST00000258909 CEP83Q9Y592 693 aa19.67■□□□□ 0.74
TM6SF1-201ENST00000258909 ZZEF1O43149 2961 aa19.66■□□□□ 0.74
TM6SF1-201ENST00000258909 CHD6Q8TD26 2715 aa19.66■□□□□ 0.74
TM6SF1-201ENST00000258909 A0A1B0GVT2 93 aa19.66■□□□□ 0.74
TM6SF1-201ENST00000258909 GTPBP10A4D1E9 387 aaKnown RBP19.66■□□□□ 0.74
TM6SF1-201ENST00000258909 FOXN3O00409 490 aaPredicted RBP19.66■□□□□ 0.74
TM6SF1-201ENST00000258909 FSBPO95073 299 aa19.66■□□□□ 0.74
TM6SF1-201ENST00000258909 ASLP04424 464 aa19.66■□□□□ 0.74
TM6SF1-201ENST00000258909 CSNK1EP49674 416 aaKnown RBP19.66■□□□□ 0.74
TM6SF1-201ENST00000258909 CDK17Q00537 523 aa19.66■□□□□ 0.74
TM6SF1-201ENST00000258909 EIF4EBP2Q13542 120 aaPredicted RBP19.66■□□□□ 0.74
TM6SF1-201ENST00000258909 HNRNPA1L2Q32P51 320 aaKnown RBP19.66■□□□□ 0.74
TM6SF1-201ENST00000258909 DPCR1Q3MIW9 517 aa19.66■□□□□ 0.74
TM6SF1-201ENST00000258909 OR6B2Q6IFH4 312 aa19.66■□□□□ 0.74
TM6SF1-201ENST00000258909 FAM183BPQ6ZVS7 135 aa19.66■□□□□ 0.74
TM6SF1-201ENST00000258909 SLC47A2Q86VL8 602 aa19.66■□□□□ 0.74
TM6SF1-201ENST00000258909 ATP6V0D2Q8N8Y2 350 aa19.66■□□□□ 0.74
TM6SF1-201ENST00000258909 RNF34Q969K3 372 aa19.66■□□□□ 0.74
TM6SF1-201ENST00000258909 RPL10LQ96L21 214 aaKnown RBP19.66■□□□□ 0.74
TM6SF1-201ENST00000258909 ZDHHC5Q9C0B5 715 aa19.66■□□□□ 0.74
TM6SF1-201ENST00000258909 RSPH9Q9H1X1 276 aaPredicted RBP19.66■□□□□ 0.74
TM6SF1-201ENST00000258909 CLSTN2Q9H4D0 955 aa19.66■□□□□ 0.74
TM6SF1-201ENST00000258909 GAREM1Q9H706 876 aa19.66■□□□□ 0.74
TM6SF1-201ENST00000258909 FBRSQ9HAH7 460 aa19.66■□□□□ 0.74
TM6SF1-201ENST00000258909 SLTMQ9NWH9 1034 aaKnown RBP eCLIP19.66■□□□□ 0.74
TM6SF1-201ENST00000258909 DDIT4Q9NX09 232 aa19.66■□□□□ 0.74
TM6SF1-201ENST00000258909 KIAA1522Q9P206 1035 aaPredicted RBP19.66■□□□□ 0.74
TM6SF1-201ENST00000258909 SLCO3A1Q9UIG8 710 aa19.66■□□□□ 0.74
TM6SF1-201ENST00000258909 ZBTB32Q9Y2Y4 487 aaPredicted RBP19.66■□□□□ 0.74
TM6SF1-201ENST00000258909 KCNU1A8MYU2 1149 aa19.65■□□□□ 0.74
TM6SF1-201ENST00000258909 F5H5T6 163 aa19.65■□□□□ 0.74
TM6SF1-201ENST00000258909 ERBB2P04626 1255 aa19.65■□□□□ 0.74
TM6SF1-201ENST00000258909 PROS1P07225 676 aa19.65■□□□□ 0.74
TM6SF1-201ENST00000258909 C7P10643 843 aa19.65■□□□□ 0.74
TM6SF1-201ENST00000258909 CLCN1P35523 988 aa19.65■□□□□ 0.74
TM6SF1-201ENST00000258909 PTK2Q05397 1052 aa19.65■□□□□ 0.74
TM6SF1-201ENST00000258909 ZBTB16Q05516 673 aa19.65■□□□□ 0.74
TM6SF1-201ENST00000258909 SLC14A1Q13336 389 aa19.65■□□□□ 0.74
TM6SF1-201ENST00000258909 MAN2A1Q16706 1144 aa19.65■□□□□ 0.74
TM6SF1-201ENST00000258909 TTC31Q49AM3 519 aaPredicted RBP19.65■□□□□ 0.74
TM6SF1-201ENST00000258909 LAYNQ6UX15 382 aa19.65■□□□□ 0.74
TM6SF1-201ENST00000258909 NAXDQ8IW45 347 aa19.65■□□□□ 0.74
TM6SF1-201ENST00000258909 BIRC7Q96CA5 298 aa19.65■□□□□ 0.74
TM6SF1-201ENST00000258909 SLC2A13Q96QE2 648 aa19.65■□□□□ 0.74
TM6SF1-201ENST00000258909 PRMT1Q99873 361 aaKnown RBP19.65■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms