RNA–Protein interactions for RNA: ENST00000258781.10

CCM2-201, Transcript of CCM2 scaffold protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CCM2, Length 1,894 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-201ENST00000258781 SDHAF4Q5VUM1 108 aa28.46■■■□□ 2.15
CCM2-201ENST00000258781 IGDCC3Q8IVU1 814 aa28.46■■■□□ 2.15
CCM2-201ENST00000258781 RNF168Q8IYW5 571 aaPredicted RBP28.46■■■□□ 2.15
CCM2-201ENST00000258781 XPO6Q96QU8 1125 aaKnown RBP28.46■■■□□ 2.15
CCM2-201ENST00000258781 TTPALQ9BTX7 342 aa28.46■■■□□ 2.15
CCM2-201ENST00000258781 EIF2B3Q9NR50 452 aaKnown RBP28.46■■■□□ 2.15
CCM2-201ENST00000258781 PSMC3IPQ9P2W1 217 aaPredicted RBP28.46■■■□□ 2.15
CCM2-201ENST00000258781 MTMR11A4FU01 709 aa28.45■■■□□ 2.15
CCM2-201ENST00000258781 RTN3O95197 1032 aaPredicted RBP28.45■■■□□ 2.15
CCM2-201ENST00000258781 HTRA4P83105 476 aaPredicted RBP28.45■■■□□ 2.15
CCM2-201ENST00000258781 PPIDQ08752 370 aaKnown RBP28.45■■■□□ 2.15
CCM2-201ENST00000258781 GALNT2Q10471 571 aa28.45■■■□□ 2.15
CCM2-201ENST00000258781 WASHC5Q12768 1159 aa28.45■■■□□ 2.15
CCM2-201ENST00000258781 FAM182AQ5T1J6 154 aa28.45■■■□□ 2.15
CCM2-201ENST00000258781 DENND5BQ6ZUT9 1274 aa28.45■■■□□ 2.15
CCM2-201ENST00000258781 NPWQ8N729 165 aa28.45■■■□□ 2.15
CCM2-201ENST00000258781 FBF1Q8TES7 1133 aa28.45■■■□□ 2.15
CCM2-201ENST00000258781 DPF3Q92784 378 aa28.45■■■□□ 2.15
CCM2-201ENST00000258781 COMMD8Q9NX08 183 aa28.45■■■□□ 2.15
CCM2-201ENST00000258781 MTSS1O43312 755 aa28.44■■■□□ 2.14
CCM2-201ENST00000258781 SARNPP82979 210 aaKnown RBP28.44■■■□□ 2.14
CCM2-201ENST00000258781 SLC39A11Q8N1S5 342 aa28.44■■■□□ 2.14
CCM2-201ENST00000258781 COLGALT1Q8NBJ5 622 aa28.44■■■□□ 2.14
CCM2-201ENST00000258781 HERVK_113Q902F9 699 aa28.44■■■□□ 2.14
CCM2-201ENST00000258781 HDAC11Q96DB2 347 aa28.44■■■□□ 2.14
CCM2-201ENST00000258781 SPATA17Q96L03 361 aa28.44■■■□□ 2.14
CCM2-201ENST00000258781 ZNF558Q96NG5 402 aa28.44■■■□□ 2.14
CCM2-201ENST00000258781 INTS9Q9NV88 658 aaKnown RBP28.44■■■□□ 2.14
CCM2-201ENST00000258781 OSER1Q9NX31 292 aa28.44■■■□□ 2.14
CCM2-201ENST00000258781 SFMBT1Q9UHJ3 866 aa28.44■■■□□ 2.14
CCM2-201ENST00000258781 MYO18AQ92614 2054 aaKnown RBP28.44■■■□□ 2.14
CCM2-201ENST00000258781 HOXC13P31276 330 aa28.44■■■□□ 2.14
CCM2-201ENST00000258781 PARP6Q2NL67 630 aa28.44■■■□□ 2.14
CCM2-201ENST00000258781 RSPO2Q6UXX9 243 aaPredicted RBP28.44■■■□□ 2.14
CCM2-201ENST00000258781 ZNF534Q76KX8 674 aa28.44■■■□□ 2.14
CCM2-201ENST00000258781 TTC9BQ8N6N2 239 aa28.44■■■□□ 2.14
CCM2-201ENST00000258781 NETO2Q8NC67 525 aa28.44■■■□□ 2.14
CCM2-201ENST00000258781 ATXN2LQ8WWM7 1075 aaKnown RBP28.44■■■□□ 2.14
CCM2-201ENST00000258781 DHRS4Q9BTZ2 278 aa28.44■■■□□ 2.14
CCM2-201ENST00000258781 IGSF9Q9P2J2 1179 aa28.44■■■□□ 2.14
CCM2-201ENST00000258781 NEU3Q9UQ49 428 aa28.44■■■□□ 2.14
CCM2-201ENST00000258781 NR2E3Q9Y5X4 410 aa28.44■■■□□ 2.14
CCM2-201ENST00000258781 AVILO75366 819 aa28.43■■■□□ 2.14
CCM2-201ENST00000258781 PAGE1O75459 146 aa28.43■■■□□ 2.14
CCM2-201ENST00000258781 GSTA2P09210 222 aa28.43■■■□□ 2.14
CCM2-201ENST00000258781 LINC00271P0C7V0 271 aa28.43■■■□□ 2.14
CCM2-201ENST00000258781 ARPP19P56211 112 aa28.43■■■□□ 2.14
CCM2-201ENST00000258781 USP46P62068 366 aa28.43■■■□□ 2.14
CCM2-201ENST00000258781 MTM1Q13496 603 aa28.43■■■□□ 2.14
CCM2-201ENST00000258781 NLRP14Q86W24 1093 aa28.43■■■□□ 2.14
CCM2-201ENST00000258781 TP53INP2Q8IXH6 220 aa28.43■■■□□ 2.14
CCM2-201ENST00000258781 AGGF1Q8N302 714 aaeCLIP28.43■■■□□ 2.14
CCM2-201ENST00000258781 CYTH2Q99418 400 aa28.43■■■□□ 2.14
CCM2-201ENST00000258781 PPANQ9NQ55 473 aaKnown RBP28.43■■■□□ 2.14
CCM2-201ENST00000258781 SENP1Q9P0U3 644 aa28.43■■■□□ 2.14
CCM2-201ENST00000258781 GMIPQ9P107 970 aa28.43■■■□□ 2.14
CCM2-201ENST00000258781 CHD7Q9P2D1 2997 aa28.43■■■□□ 2.14
CCM2-201ENST00000258781 GMNCA6NCL1 334 aa28.42■■■□□ 2.14
CCM2-201ENST00000258781 FGF10O15520 208 aaPredicted RBP28.42■■■□□ 2.14
CCM2-201ENST00000258781 MSI1O43347 362 aaKnown RBP28.42■■■□□ 2.14
CCM2-201ENST00000258781 HAPLN1P10915 354 aaPredicted RBP28.42■■■□□ 2.14
CCM2-201ENST00000258781 MLNP12872 115 aa28.42■■■□□ 2.14
CCM2-201ENST00000258781 LAG3P18627 525 aa28.42■■■□□ 2.14
CCM2-201ENST00000258781 YWHAQP27348 245 aa28.42■■■□□ 2.14
CCM2-201ENST00000258781 NRG1Q02297 640 aaPredicted RBP28.42■■■□□ 2.14
CCM2-201ENST00000258781 MANEALQ5VSG8 457 aa28.42■■■□□ 2.14
CCM2-201ENST00000258781 PRSS55Q6UWB4 352 aaPredicted RBP28.42■■■□□ 2.14
CCM2-201ENST00000258781 TRABD2AQ86V40 505 aa28.42■■■□□ 2.14
CCM2-201ENST00000258781 ZNF567Q8N184 647 aa28.42■■■□□ 2.14
CCM2-201ENST00000258781 CLIC5Q9NZA1 410 aa28.42■■■□□ 2.14
CCM2-201ENST00000258781 SEPT10Q9P0V9 454 aa28.42■■■□□ 2.14
CCM2-201ENST00000258781 TLR6Q9Y2C9 796 aa28.42■■■□□ 2.14
CCM2-201ENST00000258781 TMEM120BA0PK00 339 aa28.42■■■□□ 2.14
CCM2-201ENST00000258781 KCNU1A8MYU2 1149 aa28.42■■■□□ 2.14
CCM2-201ENST00000258781 RASA4BC9J798 803 aa28.42■■■□□ 2.14
CCM2-201ENST00000258781 NDUFAB1O14561 156 aa28.42■■■□□ 2.14
CCM2-201ENST00000258781 RASA4O43374 803 aa28.42■■■□□ 2.14
CCM2-201ENST00000258781 BRAFP15056 766 aa28.42■■■□□ 2.14
CCM2-201ENST00000258781 PSEN1P49768 467 aa28.42■■■□□ 2.14
CCM2-201ENST00000258781 PPARDQ03181 441 aa28.42■■■□□ 2.14
CCM2-201ENST00000258781 SRRM1Q8IYB3 904 aaKnown RBP28.42■■■□□ 2.14
CCM2-201ENST00000258781 STKLD1Q8NE28 680 aa28.42■■■□□ 2.14
CCM2-201ENST00000258781 CCDC134Q9H6E4 229 aa28.42■■■□□ 2.14
CCM2-201ENST00000258781 NUP205Q92621 2012 aa28.41■■■□□ 2.14
CCM2-201ENST00000258781 CCDC85CA6NKD9 419 aa28.41■■■□□ 2.14
CCM2-201ENST00000258781 VNN2O95498 520 aa28.41■■■□□ 2.14
CCM2-201ENST00000258781 FAM107AO95990 144 aa28.41■■■□□ 2.14
CCM2-201ENST00000258781 SLC2A3P11169 496 aa28.41■■■□□ 2.14
CCM2-201ENST00000258781 STX2P32856 288 aa28.41■■■□□ 2.14
CCM2-201ENST00000258781 GARSP41250 739 aaKnown RBP28.41■■■□□ 2.14
CCM2-201ENST00000258781 SEC24CP53992 1094 aa28.41■■■□□ 2.14
CCM2-201ENST00000258781 ZNF33AQ06730 810 aa28.41■■■□□ 2.14
CCM2-201ENST00000258781 RNF19BQ6ZMZ0 732 aa28.41■■■□□ 2.14
CCM2-201ENST00000258781 HERC6Q8IVU3 1022 aa28.41■■■□□ 2.14
CCM2-201ENST00000258781 FBXO32Q969P5 355 aa28.41■■■□□ 2.14
CCM2-201ENST00000258781 ZBED2Q9BTP6 218 aa28.41■■■□□ 2.14
CCM2-201ENST00000258781 SLC4A7Q9Y6M7 1214 aa28.41■■■□□ 2.14
CCM2-201ENST00000258781 CDH23Q9H251 3354 aa28.41■■■□□ 2.14
CCM2-201ENST00000258781 SHROOM3Q8TF72 1996 aa28.41■■■□□ 2.14
CCM2-201ENST00000258781 CREB1P16220 341 aa28.4■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms