RNA–Protein interactions for RNA: ENST00000257548.9

USP30-201, Transcript of ubiquitin specific peptidase 30, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP30, Length 3,742 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP30-201ENST00000257548 TSR3Q9UJK0 312 aaKnown RBP12.62□□□□□ -0.39
USP30-201ENST00000257548 RUVBL2Q9Y230 463 aaKnown RBP12.62□□□□□ -0.39
USP30-201ENST00000257548 DDX60Q8IY21 1712 aaKnown RBP12.62□□□□□ -0.39
USP30-201ENST00000257548 PSMD12O00232 456 aaPredicted RBP12.62□□□□□ -0.39
USP30-201ENST00000257548 GRIN3BO60391 1043 aa12.62□□□□□ -0.39
USP30-201ENST00000257548 ALOX15P16050 662 aaPredicted RBP12.62□□□□□ -0.39
USP30-201ENST00000257548 KPNA1P52294 538 aaPredicted RBP12.62□□□□□ -0.39
USP30-201ENST00000257548 LGMNQ99538 433 aa12.62□□□□□ -0.39
USP30-201ENST00000257548 TMEM39BQ9GZU3 492 aa12.62□□□□□ -0.39
USP30-201ENST00000257548 DDX28Q9NUL7 540 aaKnown RBP12.62□□□□□ -0.39
USP30-201ENST00000257548 DGKBQ9Y6T7 804 aa12.62□□□□□ -0.39
USP30-201ENST00000257548 SYCE1LA8MT33 242 aa12.61□□□□□ -0.39
USP30-201ENST00000257548 PTGES3LE9PB15 166 aa12.61□□□□□ -0.39
USP30-201ENST00000257548 PDLIM1O00151 329 aa12.61□□□□□ -0.39
USP30-201ENST00000257548 ITGB3P05106 788 aa12.61□□□□□ -0.39
USP30-201ENST00000257548 IL1R1P14778 569 aa12.61□□□□□ -0.39
USP30-201ENST00000257548 HNRNPLP14866 589 aaKnown RBP eCLIP12.61□□□□□ -0.392e-6■■■□□ 18.7
USP30-201ENST00000257548 CDH3P22223 829 aa12.61□□□□□ -0.39
USP30-201ENST00000257548 NFKBIAP25963 317 aa12.61□□□□□ -0.39
USP30-201ENST00000257548 SFNP31947 248 aa12.61□□□□□ -0.39
USP30-201ENST00000257548 HSPA13P48723 471 aa12.61□□□□□ -0.39
USP30-201ENST00000257548 SLC18A1P54219 525 aa12.61□□□□□ -0.39
USP30-201ENST00000257548 MSLNQ13421 630 aaPredicted RBP12.61□□□□□ -0.39
USP30-201ENST00000257548 SPIDRQ14159 915 aa12.61□□□□□ -0.39
USP30-201ENST00000257548 FAM47CQ5HY64 1035 aa12.61□□□□□ -0.39
USP30-201ENST00000257548 BPIFB6Q8NFQ5 453 aa12.61□□□□□ -0.39
USP30-201ENST00000257548 IARS2Q9NSE4 1012 aaKnown RBP12.61□□□□□ -0.39
USP30-201ENST00000257548 PKD2L2Q9NZM6 624 aa12.61□□□□□ -0.39
USP30-201ENST00000257548 ZNF232Q9UNY5 417 aa12.61□□□□□ -0.39
USP30-201ENST00000257548 A0A1W2PPW3 197 aa12.61□□□□□ -0.39
USP30-201ENST00000257548 GBE1Q04446 702 aa12.61□□□□□ -0.39
USP30-201ENST00000257548 IL23RQ5VWK5 629 aa12.61□□□□□ -0.39
USP30-201ENST00000257548 KYAT3Q6YP21 454 aaKnown RBP12.61□□□□□ -0.39
USP30-201ENST00000257548 GK5Q6ZS86 529 aa12.61□□□□□ -0.39
USP30-201ENST00000257548 FAM160B2Q86V87 743 aa12.61□□□□□ -0.39
USP30-201ENST00000257548 RBM12BQ8IXT5 1001 aaKnown RBP12.61□□□□□ -0.39
USP30-201ENST00000257548 ZBTB8BQ8NAP8 495 aaPredicted RBP12.61□□□□□ -0.39
USP30-201ENST00000257548 COLGALT1Q8NBJ5 622 aa12.61□□□□□ -0.39
USP30-201ENST00000257548 GRIN3AQ8TCU5 1115 aa12.61□□□□□ -0.39
USP30-201ENST00000257548 MAGEE2Q8TD90 523 aaPredicted RBP12.61□□□□□ -0.39
USP30-201ENST00000257548 BTBD9Q96Q07 612 aa12.61□□□□□ -0.39
USP30-201ENST00000257548 CCDC28BQ9BUN5 200 aa12.61□□□□□ -0.39
USP30-201ENST00000257548 UBAP1Q9NZ09 502 aa12.61□□□□□ -0.39
USP30-201ENST00000257548 COQ6Q9Y2Z9 468 aa12.61□□□□□ -0.39
USP30-201ENST00000257548 COL14A1Q05707 1796 aaKnown RBP12.61□□□□□ -0.39
USP30-201ENST00000257548 RGSL1A5PLK6 1076 aa12.61□□□□□ -0.39
USP30-201ENST00000257548 TOR1BO14657 336 aa12.61□□□□□ -0.39
USP30-201ENST00000257548 BCL10O95999 233 aa12.61□□□□□ -0.39
USP30-201ENST00000257548 CCDC81Q6ZN84 652 aa12.61□□□□□ -0.39
USP30-201ENST00000257548 TFB1MQ8WVM0 346 aaKnown RBP12.61□□□□□ -0.39
USP30-201ENST00000257548 SDCCAG3Q96C92 435 aa12.61□□□□□ -0.39
USP30-201ENST00000257548 GMCL1Q96IK5 515 aa12.61□□□□□ -0.39
USP30-201ENST00000257548 SLC39A3Q9BRY0 314 aa12.61□□□□□ -0.39
USP30-201ENST00000257548 YIPF2Q9BWQ6 316 aa12.61□□□□□ -0.39
USP30-201ENST00000257548 NOL6Q9H6R4 1146 aaKnown RBP12.61□□□□□ -0.39
USP30-201ENST00000257548 LINC00854A0A1B0GVQ3 168 aa12.6□□□□□ -0.39
USP30-201ENST00000257548 INPP4BO15327 924 aa12.6□□□□□ -0.39
USP30-201ENST00000257548 GARTP22102 1010 aa12.6□□□□□ -0.39
USP30-201ENST00000257548 SPP2Q13103 211 aa12.6□□□□□ -0.39
USP30-201ENST00000257548 CMPK2Q5EBM0 449 aa12.6□□□□□ -0.39
USP30-201ENST00000257548 SNRNP48Q6IEG0 339 aaKnown RBP12.6□□□□□ -0.39
USP30-201ENST00000257548 LARGE2Q8N3Y3 721 aa12.6□□□□□ -0.39
USP30-201ENST00000257548 ZC3H15Q8WU90 426 aaKnown RBP12.6□□□□□ -0.39
USP30-201ENST00000257548 FAM163AQ96GL9 167 aaPredicted RBP12.6□□□□□ -0.39
USP30-201ENST00000257548 EBNA1BP2Q99848 306 aaKnown RBP12.6□□□□□ -0.39
USP30-201ENST00000257548 CCDC106Q9BWC9 280 aa12.6□□□□□ -0.39
USP30-201ENST00000257548 ECM29Q5VYK3 1845 aa12.6□□□□□ -0.39
USP30-201ENST00000257548 DYTNA2CJ06 578 aa12.6□□□□□ -0.39
USP30-201ENST00000257548 IQCJ-SCHIP1C9J366 451 aaPredicted RBP12.6□□□□□ -0.39
USP30-201ENST00000257548 KCNH1O95259 989 aa12.6□□□□□ -0.39
USP30-201ENST00000257548 CYP2F1P24903 491 aa12.6□□□□□ -0.39
USP30-201ENST00000257548 CHRNA5P30532 468 aa12.6□□□□□ -0.39
USP30-201ENST00000257548 MAGEA8P43361 318 aa12.6□□□□□ -0.39
USP30-201ENST00000257548 OLIG2Q13516 323 aa12.6□□□□□ -0.39
USP30-201ENST00000257548 POTEHQ6S545 545 aa12.6□□□□□ -0.39
USP30-201ENST00000257548 C4orf19Q8IY42 314 aa12.6□□□□□ -0.39
USP30-201ENST00000257548 HPS1Q92902 700 aa12.6□□□□□ -0.39
USP30-201ENST00000257548 ZNF512Q96ME7 567 aaPredicted RBP12.6□□□□□ -0.39
USP30-201ENST00000257548 NMRAL1Q9HBL8 299 aa12.6□□□□□ -0.39
USP30-201ENST00000257548 ITGA11Q9UKX5 1188 aa12.6□□□□□ -0.39
USP30-201ENST00000257548 SNX9Q9Y5X1 595 aa12.6□□□□□ -0.39
USP30-201ENST00000257548 KCNU1A8MYU2 1149 aa12.6□□□□□ -0.39
USP30-201ENST00000257548 CFAP99D6REC4 459 aa12.6□□□□□ -0.39
USP30-201ENST00000257548 SPTLC1O15269 473 aa12.6□□□□□ -0.39
USP30-201ENST00000257548 MAN1A2O60476 641 aa12.6□□□□□ -0.39
USP30-201ENST00000257548 PLIN3O60664 434 aa12.6□□□□□ -0.39
USP30-201ENST00000257548 PTPN1P18031 435 aaKnown RBP12.6□□□□□ -0.39
USP30-201ENST00000257548 CCND2P30279 289 aa12.6□□□□□ -0.39
USP30-201ENST00000257548 SLC5A2P31639 672 aa12.6□□□□□ -0.39
USP30-201ENST00000257548 MRPS5P82675 430 aaKnown RBP12.6□□□□□ -0.39
USP30-201ENST00000257548 ADRM1Q16186 407 aa12.6□□□□□ -0.39
USP30-201ENST00000257548 ANKDD1AQ495B1 522 aa12.6□□□□□ -0.39
USP30-201ENST00000257548 ZNF618Q5T7W0 954 aa12.6□□□□□ -0.39
USP30-201ENST00000257548 GPATCH1Q9BRR8 931 aaKnown RBP12.6□□□□□ -0.39
USP30-201ENST00000257548 SSU72Q9NP77 194 aaKnown RBP12.6□□□□□ -0.39
USP30-201ENST00000257548 ZNF302Q9NR11 478 aa12.6□□□□□ -0.39
USP30-201ENST00000257548 NRBP2Q9NSY0 501 aa12.6□□□□□ -0.39
USP30-201ENST00000257548 EURLQ9NYK6 297 aa12.6□□□□□ -0.39
USP30-201ENST00000257548 COPG2Q9UBF2 871 aa12.6□□□□□ -0.39
USP30-201ENST00000257548 ANKRD36CQ5JPF3 1778 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms