RNA–Protein interactions for RNA: ENST00000257264.3

TCN1-201, Transcript of transcobalamin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TCN1, Length 1,582 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCN1-201ENST00000257264 RAB11FIP4Q86YS3 637 aa5.41□□□□□ -1.54
TCN1-201ENST00000257264 EPHX4Q8IUS5 362 aa5.41□□□□□ -1.54
TCN1-201ENST00000257264 SUGP2Q8IX01 1082 aaKnown RBP eCLIP5.41□□□□□ -1.54
TCN1-201ENST00000257264 THNSL1Q8IYQ7 743 aa5.41□□□□□ -1.54
TCN1-201ENST00000257264 KIAA2013Q8IYS2 634 aa5.41□□□□□ -1.54
TCN1-201ENST00000257264 ADGRF2Q8IZF7 708 aa5.41□□□□□ -1.54
TCN1-201ENST00000257264 NUP93Q8N1F7 819 aa5.41□□□□□ -1.54
TCN1-201ENST00000257264 CFAP52Q8N1V2 620 aa5.41□□□□□ -1.54
TCN1-201ENST00000257264 FSTL5Q8N475 847 aaPredicted RBP5.41□□□□□ -1.54
TCN1-201ENST00000257264 POMGNT2Q8NAT1 580 aa5.41□□□□□ -1.54
TCN1-201ENST00000257264 RFWD2Q8NHY2 731 aa5.41□□□□□ -1.54
TCN1-201ENST00000257264 ZCCHC14Q8WYQ9 949 aaKnown RBP5.41□□□□□ -1.54
TCN1-201ENST00000257264 TRIM44Q96DX7 344 aaPredicted RBP5.41□□□□□ -1.54
TCN1-201ENST00000257264 LIN37Q96GY3 246 aaPredicted RBP5.41□□□□□ -1.54
TCN1-201ENST00000257264 CCDC34Q96HJ3 373 aa5.41□□□□□ -1.54
TCN1-201ENST00000257264 RPL10LQ96L21 214 aaKnown RBP5.41□□□□□ -1.54
TCN1-201ENST00000257264 EIF3CQ99613 913 aaKnown RBP5.41□□□□□ -1.54
TCN1-201ENST00000257264 HGH1Q9BTY7 390 aa5.41□□□□□ -1.54
TCN1-201ENST00000257264 C11orf84Q9BUA3 381 aaPredicted RBP5.41□□□□□ -1.54
TCN1-201ENST00000257264 HERC2P3Q9BVR0 1158 aa5.41□□□□□ -1.54
TCN1-201ENST00000257264 APOL6Q9BWW8 343 aa5.41□□□□□ -1.54
TCN1-201ENST00000257264 XPO4Q9C0E2 1151 aaKnown RBP5.41□□□□□ -1.54
TCN1-201ENST00000257264 EPC1Q9H2F5 836 aa5.41□□□□□ -1.54
TCN1-201ENST00000257264 MROH8Q9H579 483 aa5.41□□□□□ -1.54
TCN1-201ENST00000257264 KAT14Q9H8E8 782 aa5.41□□□□□ -1.54
TCN1-201ENST00000257264 TRPV4Q9HBA0 871 aa5.41□□□□□ -1.54
TCN1-201ENST00000257264 GBA2Q9HCG7 927 aaPredicted RBP5.41□□□□□ -1.54
TCN1-201ENST00000257264 POLKQ9UBT6 870 aa5.41□□□□□ -1.54
TCN1-201ENST00000257264 ZNF70Q9UC06 446 aaPredicted RBP5.41□□□□□ -1.54
TCN1-201ENST00000257264 DRG1Q9Y295 367 aaKnown RBP5.41□□□□□ -1.54
TCN1-201ENST00000257264 PCDHA10Q9Y5I2 948 aa5.41□□□□□ -1.54
TCN1-201ENST00000257264 ITSN1Q15811 1721 aa5.4□□□□□ -1.54
TCN1-201ENST00000257264 TBKBP1A7MCY6 615 aa5.4□□□□□ -1.55
TCN1-201ENST00000257264 A8MV72 311 aaPredicted RBP5.4□□□□□ -1.55
TCN1-201ENST00000257264 C1QTNF9BB2RNN3 333 aa5.4□□□□□ -1.55
TCN1-201ENST00000257264 HEXIM1O94992 359 aaKnown RBP5.4□□□□□ -1.55
TCN1-201ENST00000257264 PLATP00750 562 aa5.4□□□□□ -1.55
TCN1-201ENST00000257264 IFNAR1P17181 557 aa5.4□□□□□ -1.55
TCN1-201ENST00000257264 CDH2P19022 906 aaPredicted RBP5.4□□□□□ -1.55
TCN1-201ENST00000257264 YY1P25490 414 aa5.4□□□□□ -1.55
TCN1-201ENST00000257264 THPOP40225 353 aa5.4□□□□□ -1.55
TCN1-201ENST00000257264 GSTM5P46439 218 aa5.4□□□□□ -1.55
TCN1-201ENST00000257264 GCLCP48506 637 aaPredicted RBP5.4□□□□□ -1.55
TCN1-201ENST00000257264 CLCN2P51788 898 aa5.4□□□□□ -1.55
TCN1-201ENST00000257264 ZNF41P51814 821 aaPredicted RBP5.4□□□□□ -1.55
TCN1-201ENST00000257264 ZNF134P52741 427 aa5.4□□□□□ -1.55
TCN1-201ENST00000257264 EIF3BP55884 814 aaKnown RBP5.4□□□□□ -1.55
TCN1-201ENST00000257264 RBM6P78332 1123 aaKnown RBP5.4□□□□□ -1.55
TCN1-201ENST00000257264 GOLGA8FQ08AF8 430 aa5.4□□□□□ -1.55
TCN1-201ENST00000257264 FHL3Q13643 280 aa5.4□□□□□ -1.55
TCN1-201ENST00000257264 THOC5Q13769 683 aaKnown RBP5.4□□□□□ -1.55
TCN1-201ENST00000257264 CCNIQ14094 377 aa5.4□□□□□ -1.55
TCN1-201ENST00000257264 RABEP1Q15276 862 aa5.4□□□□□ -1.55
TCN1-201ENST00000257264 PKN2Q16513 984 aaKnown RBP5.4□□□□□ -1.55
TCN1-201ENST00000257264 TMEM154Q6P9G4 183 aa5.4□□□□□ -1.55
TCN1-201ENST00000257264 NCEH1Q6PIU2 408 aa5.4□□□□□ -1.55
TCN1-201ENST00000257264 KRT27Q7Z3Y8 459 aa5.4□□□□□ -1.55
TCN1-201ENST00000257264 SCN4BQ8IWT1 228 aa5.4□□□□□ -1.55
TCN1-201ENST00000257264 UNC45BQ8IWX7 931 aa5.4□□□□□ -1.55
TCN1-201ENST00000257264 PSD4Q8NDX1 1056 aa5.4□□□□□ -1.55
TCN1-201ENST00000257264 TNIP2Q8NFZ5 429 aa5.4□□□□□ -1.55
TCN1-201ENST00000257264 ZFP28Q8NHY6 868 aa5.4□□□□□ -1.55
TCN1-201ENST00000257264 GABPB2Q8TAK5 448 aaPredicted RBP5.4□□□□□ -1.55
TCN1-201ENST00000257264 RUFY2Q8WXA3 655 aa5.4□□□□□ -1.55
TCN1-201ENST00000257264 POMGNT1Q8WZA1 660 aa5.4□□□□□ -1.55
TCN1-201ENST00000257264 MASTLQ96GX5 879 aa5.4□□□□□ -1.55
TCN1-201ENST00000257264 PHACTR3Q96KR7 559 aa5.4□□□□□ -1.55
TCN1-201ENST00000257264 TRIB1Q96RU8 372 aa5.4□□□□□ -1.55
TCN1-201ENST00000257264 PIP5K1AQ99755 562 aa5.4□□□□□ -1.55
TCN1-201ENST00000257264 LBHD1Q9BQE6 289 aaPredicted RBP5.4□□□□□ -1.55
TCN1-201ENST00000257264 PTDSS2Q9BVG9 487 aa5.4□□□□□ -1.55
TCN1-201ENST00000257264 TEX12Q9BXU0 123 aa5.4□□□□□ -1.55
TCN1-201ENST00000257264 SLC6A17Q9H1V8 727 aa5.4□□□□□ -1.55
TCN1-201ENST00000257264 TTYH1Q9H313 450 aaPredicted RBP5.4□□□□□ -1.55
TCN1-201ENST00000257264 CXorf36Q9H7Y0 433 aa5.4□□□□□ -1.55
TCN1-201ENST00000257264 SLCO3A1Q9UIG8 710 aa5.4□□□□□ -1.55
TCN1-201ENST00000257264 TMCC3Q9ULS5 477 aa5.4□□□□□ -1.55
TCN1-201ENST00000257264 PA2G4Q9UQ80 394 aaKnown RBP5.4□□□□□ -1.55
TCN1-201ENST00000257264 HDAC5Q9UQL6 1122 aa5.4□□□□□ -1.55
TCN1-201ENST00000257264 MRPS17Q9Y2R5 130 aaKnown RBP5.4□□□□□ -1.55
TCN1-201ENST00000257264 NEU2Q9Y3R4 380 aa5.4□□□□□ -1.55
TCN1-201ENST00000257264 ABCC4O15439 1325 aa5.4□□□□□ -1.55
TCN1-201ENST00000257264 COL15A1P39059 1388 aa5.4□□□□□ -1.55
TCN1-201ENST00000257264 AGLP35573 1532 aa5.39□□□□□ -1.55
TCN1-201ENST00000257264 GXYLT2A0PJZ3 443 aa5.39□□□□□ -1.55
TCN1-201ENST00000257264 MBD3L5A6NJ08 208 aaPredicted RBP5.39□□□□□ -1.55
TCN1-201ENST00000257264 FAM90A7PA6NKC0 464 aa5.39□□□□□ -1.55
TCN1-201ENST00000257264 FAM90A22PA8MWA6 464 aa5.39□□□□□ -1.55
TCN1-201ENST00000257264 FAM90A12PA8MX19 464 aa5.39□□□□□ -1.55
TCN1-201ENST00000257264 A8MXE2 369 aa5.39□□□□□ -1.55
TCN1-201ENST00000257264 FAM90A23PA8MXZ1 464 aa5.39□□□□□ -1.55
TCN1-201ENST00000257264 PSMA7O14818 248 aa5.39□□□□□ -1.55
TCN1-201ENST00000257264 BCAT2O15382 392 aaPredicted RBP5.39□□□□□ -1.55
TCN1-201ENST00000257264 HNRNPCL1O60812 293 aaKnown RBP5.39□□□□□ -1.55
TCN1-201ENST00000257264 CBFA2T3O75081 653 aa5.39□□□□□ -1.55
TCN1-201ENST00000257264 ENTPD3O75355 529 aa5.39□□□□□ -1.55
TCN1-201ENST00000257264 PDE8BO95263 885 aa5.39□□□□□ -1.55
TCN1-201ENST00000257264 SLU7O95391 586 aaKnown RBP5.39□□□□□ -1.55
TCN1-201ENST00000257264 EIF2S1P05198 315 aaKnown RBP5.39□□□□□ -1.55
TCN1-201ENST00000257264 ATP5BP06576 529 aaKnown RBP5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms