RNA–Protein interactions for RNA: ENST00000253251.12

UBE4B-201, Transcript of ubiquitination factor E4B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE4B, Length 4,772 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-201ENST00000253251 MYCBPAPQ8TBZ2 947 aa15.35■□□□□ 0.05
UBE4B-201ENST00000253251 PCDHB18PQ96TA0 734 aa15.35■□□□□ 0.05
UBE4B-201ENST00000253251 CIPCQ9C0C6 399 aa15.35■□□□□ 0.05
UBE4B-201ENST00000253251 ASAH2Q9NR71 780 aa15.35■□□□□ 0.05
UBE4B-201ENST00000253251 TUBGCP4Q9UGJ1 667 aa15.35■□□□□ 0.05
UBE4B-201ENST00000253251 KCNK1O00180 336 aa15.35■□□□□ 0.05
UBE4B-201ENST00000253251 AASDHQ4L235 1098 aaPredicted RBP15.35■□□□□ 0.05
UBE4B-201ENST00000253251 LRRC8EQ6NSJ5 796 aa15.35■□□□□ 0.05
UBE4B-201ENST00000253251 SLC26A9Q7LBE3 791 aa15.35■□□□□ 0.05
UBE4B-201ENST00000253251 ST13P4Q8IZP2 240 aaPredicted RBP15.35■□□□□ 0.05
UBE4B-201ENST00000253251 DAW1Q8N136 415 aa15.35■□□□□ 0.05
UBE4B-201ENST00000253251 LPCAT1Q8NF37 534 aa15.35■□□□□ 0.05
UBE4B-201ENST00000253251 MDM1Q8TC05 714 aa15.35■□□□□ 0.05
UBE4B-201ENST00000253251 BHMTQ93088 406 aa15.35■□□□□ 0.05
UBE4B-201ENST00000253251 ACBD6Q9BR61 282 aa15.35■□□□□ 0.05
UBE4B-201ENST00000253251 MGAT1P26572 445 aa15.34■□□□□ 0.05
UBE4B-201ENST00000253251 CCL23P55773 120 aa15.34■□□□□ 0.05
UBE4B-201ENST00000253251 PTPN20Q4JDL3 420 aa15.34■□□□□ 0.05
UBE4B-201ENST00000253251 PCID2Q5JVF3 399 aa15.34■□□□□ 0.05
UBE4B-201ENST00000253251 TNIP2Q8NFZ5 429 aa15.34■□□□□ 0.05
UBE4B-201ENST00000253251 APOPT1Q96IL0 206 aa15.34■□□□□ 0.05
UBE4B-201ENST00000253251 APOL5Q9BWW9 433 aa15.34■□□□□ 0.05
UBE4B-201ENST00000253251 NMRK2Q9NPI5 230 aa15.34■□□□□ 0.05
UBE4B-201ENST00000253251 SYNCRIPO60506 623 aaKnown RBP15.34■□□□□ 0.05
UBE4B-201ENST00000253251 PPFIA2O75334 1257 aa15.34■□□□□ 0.05
UBE4B-201ENST00000253251 MAPK1P28482 360 aa15.34■□□□□ 0.05
UBE4B-201ENST00000253251 SEC24CP53992 1094 aa15.34■□□□□ 0.05
UBE4B-201ENST00000253251 KCNK10P57789 538 aa15.34■□□□□ 0.05
UBE4B-201ENST00000253251 RPL7AP62424 266 aaKnown RBP15.34■□□□□ 0.05
UBE4B-201ENST00000253251 ZNF844Q08AG5 666 aa15.34■□□□□ 0.05
UBE4B-201ENST00000253251 MON1BQ7L1V2 547 aa15.34■□□□□ 0.05
UBE4B-201ENST00000253251 HJURPQ8NCD3 748 aaPredicted RBP15.34■□□□□ 0.05
UBE4B-201ENST00000253251 HNRNPABQ99729 332 aaKnown RBP15.34■□□□□ 0.05
UBE4B-201ENST00000253251 SPG21Q9NZD8 308 aa15.34■□□□□ 0.05
UBE4B-201ENST00000253251 PDE2AO00408 941 aaPredicted RBP15.34■□□□□ 0.05
UBE4B-201ENST00000253251 SUPT7LO94864 414 aa15.34■□□□□ 0.05
UBE4B-201ENST00000253251 WARSP23381 471 aaKnown RBP15.34■□□□□ 0.05
UBE4B-201ENST00000253251 JAG1P78504 1218 aa15.34■□□□□ 0.05
UBE4B-201ENST00000253251 BCL2L1Q07817 233 aa15.34■□□□□ 0.05
UBE4B-201ENST00000253251 STARD3Q14849 445 aa15.34■□□□□ 0.05
UBE4B-201ENST00000253251 RGS9BPQ6ZS82 235 aa15.34■□□□□ 0.05
UBE4B-201ENST00000253251 HDAC7Q8WUI4 952 aa15.34■□□□□ 0.05
UBE4B-201ENST00000253251 FBXL18Q96ME1 805 aa15.34■□□□□ 0.05
UBE4B-201ENST00000253251 SMPD4Q9NXE4 827 aa15.34■□□□□ 0.05
UBE4B-201ENST00000253251 H3BMM5 538 aa15.33■□□□□ 0.05
UBE4B-201ENST00000253251 PTPN7P35236 360 aa15.33■□□□□ 0.05
UBE4B-201ENST00000253251 PTPN9P43378 593 aa15.33■□□□□ 0.05
UBE4B-201ENST00000253251 SERPINH1P50454 418 aaKnown RBP15.33■□□□□ 0.05
UBE4B-201ENST00000253251 LARP7Q4G0J3 582 aaKnown RBP eCLIP15.33■□□□□ 0.05
UBE4B-201ENST00000253251 ARMC12Q5T9G4 340 aa15.33■□□□□ 0.05
UBE4B-201ENST00000253251 DUPD1Q68J44 220 aa15.33■□□□□ 0.05
UBE4B-201ENST00000253251 ATXN2LQ8WWM7 1075 aaKnown RBP15.33■□□□□ 0.05
UBE4B-201ENST00000253251 NMRAL1Q9HBL8 299 aa15.33■□□□□ 0.05
UBE4B-201ENST00000253251 ADAM28Q9UKQ2 775 aa15.33■□□□□ 0.05
UBE4B-201ENST00000253251 POU6F1Q14863 301 aa15.33■□□□□ 0.04
UBE4B-201ENST00000253251 ARHGAP17Q68EM7 881 aa15.33■□□□□ 0.04
UBE4B-201ENST00000253251 CCDC33Q8N5R6 958 aa15.33■□□□□ 0.04
UBE4B-201ENST00000253251 ART4Q93070 314 aa15.33■□□□□ 0.04
UBE4B-201ENST00000253251 MSRAQ9UJ68 235 aa15.33■□□□□ 0.04
UBE4B-201ENST00000253251 CYP1A1P04798 512 aaPredicted RBP15.33■□□□□ 0.04
UBE4B-201ENST00000253251 SERPINA4P29622 427 aa15.33■□□□□ 0.04
UBE4B-201ENST00000253251 RAD23BP54727 409 aa15.33■□□□□ 0.04
UBE4B-201ENST00000253251 INTS6LQ5JSJ4 861 aaKnown RBP15.33■□□□□ 0.04
UBE4B-201ENST00000253251 NIPSNAP3AQ9UFN0 247 aaPredicted RBP15.33■□□□□ 0.04
UBE4B-201ENST00000253251 EIF3LQ9Y262 564 aaKnown RBP15.33■□□□□ 0.04
UBE4B-201ENST00000253251 RNF103-CHMP3A0A140T963 221 aa15.33■□□□□ 0.04
UBE4B-201ENST00000253251 WDR27A2RRH5 827 aa15.33■□□□□ 0.04
UBE4B-201ENST00000253251 CST3P01034 146 aaPredicted RBP15.33■□□□□ 0.04
UBE4B-201ENST00000253251 CDC25CP30307 473 aa15.33■□□□□ 0.04
UBE4B-201ENST00000253251 GLUD2P49448 558 aa15.33■□□□□ 0.04
UBE4B-201ENST00000253251 NAA20P61599 178 aa15.33■□□□□ 0.04
UBE4B-201ENST00000253251 ZNF792Q3KQV3 632 aa15.33■□□□□ 0.04
UBE4B-201ENST00000253251 KYAT3Q6YP21 454 aaKnown RBP15.33■□□□□ 0.04
UBE4B-201ENST00000253251 XYLT1Q86Y38 959 aa15.33■□□□□ 0.04
UBE4B-201ENST00000253251 C2orf15Q8WU43 125 aaKnown RBP15.33■□□□□ 0.04
UBE4B-201ENST00000253251 TAS2R13Q9NYV9 303 aa15.33■□□□□ 0.04
UBE4B-201ENST00000253251 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP15.32■□□□□ 0.04
UBE4B-201ENST00000253251 CRHR2Q13324 411 aa15.32■□□□□ 0.04
UBE4B-201ENST00000253251 SZRD1Q7Z422 152 aa15.32■□□□□ 0.04
UBE4B-201ENST00000253251 ZNF333Q96JL9 665 aa15.32■□□□□ 0.04
UBE4B-201ENST00000253251 ASB2Q96Q27 587 aa15.32■□□□□ 0.04
UBE4B-201ENST00000253251 RBBP8Q99708 897 aa15.32■□□□□ 0.04
UBE4B-201ENST00000253251 NUP98P52948 1817 aa15.32■□□□□ 0.04
UBE4B-201ENST00000253251 SRRM3A6NNA2 597 aaPredicted RBP15.32■□□□□ 0.04
UBE4B-201ENST00000253251 H0Y3Z8 333 aa15.32■□□□□ 0.04
UBE4B-201ENST00000253251 RNF225M0QZC1 329 aaPredicted RBP15.32■□□□□ 0.04
UBE4B-201ENST00000253251 DDHD2O94830 711 aa15.32■□□□□ 0.04
UBE4B-201ENST00000253251 RPL22P35268 128 aaKnown RBP15.32■□□□□ 0.04
UBE4B-201ENST00000253251 C12orf29Q8N999 325 aa15.32■□□□□ 0.04
UBE4B-201ENST00000253251 SLC4A11Q8NBS3 891 aa15.32■□□□□ 0.04
UBE4B-201ENST00000253251 DOLKQ9UPQ8 538 aa15.32■□□□□ 0.04
UBE4B-201ENST00000253251 RWDD3Q9Y3V2 267 aa15.32■□□□□ 0.04
UBE4B-201ENST00000253251 ATG7O95352 703 aa15.32■□□□□ 0.04
UBE4B-201ENST00000253251 SERPINE1P05121 402 aa15.32■□□□□ 0.04
UBE4B-201ENST00000253251 THRAP10827 490 aa15.32■□□□□ 0.04
UBE4B-201ENST00000253251 HDCP19113 662 aa15.32■□□□□ 0.04
UBE4B-201ENST00000253251 IRF5Q13568 498 aa15.32■□□□□ 0.04
UBE4B-201ENST00000253251 CACHD1Q5VU97 1274 aa15.32■□□□□ 0.04
UBE4B-201ENST00000253251 SEL1L3Q68CR1 1132 aa15.32■□□□□ 0.04
UBE4B-201ENST00000253251 SRLQ86TD4 932 aa15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms