RNA–Protein interactions for RNA: ENST00000249806.10

CLN6-201, Transcript of CLN6, transmembrane ER protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLN6, Length 2,243 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-201ENST00000249806 F9P00740 461 aa22.26■■□□□ 1.15
CLN6-201ENST00000249806 NQO1P15559 274 aaKnown RBP22.26■■□□□ 1.15
CLN6-201ENST00000249806 ALDH3A1P30838 453 aa22.26■■□□□ 1.15
CLN6-201ENST00000249806 HCAR3P49019 387 aa22.26■■□□□ 1.15
CLN6-201ENST00000249806 TUSC3Q13454 348 aa22.26■■□□□ 1.15
CLN6-201ENST00000249806 FYB2Q5VWT5 728 aa22.26■■□□□ 1.15
CLN6-201ENST00000249806 OVOS1Q6IE37 1185 aa22.26■■□□□ 1.15
CLN6-201ENST00000249806 PCMTD2Q9NV79 361 aa22.26■■□□□ 1.15
CLN6-201ENST00000249806 NOD1Q9Y239 953 aa22.26■■□□□ 1.15
CLN6-201ENST00000249806 M0QZQ0 153 aa22.26■■□□□ 1.15
CLN6-201ENST00000249806 LRIG2O94898 1065 aa22.26■■□□□ 1.15
CLN6-201ENST00000249806 TOP3BO95985 862 aaKnown RBP22.26■■□□□ 1.15
CLN6-201ENST00000249806 EPHB2P29323 1055 aa22.26■■□□□ 1.15
CLN6-201ENST00000249806 GRIK3Q13003 919 aa22.26■■□□□ 1.15
CLN6-201ENST00000249806 PDZD4Q76G19 769 aaPredicted RBP22.26■■□□□ 1.15
CLN6-201ENST00000249806 ARMC2Q8NEN0 867 aa22.26■■□□□ 1.15
CLN6-201ENST00000249806 DMAP1Q9NPF5 467 aaPredicted RBP22.26■■□□□ 1.15
CLN6-201ENST00000249806 RRN3Q9NYV6 651 aa22.26■■□□□ 1.15
CLN6-201ENST00000249806 KANSL3Q9P2N6 904 aa22.26■■□□□ 1.15
CLN6-201ENST00000249806 NUMBLQ9Y6R0 609 aa22.26■■□□□ 1.15
CLN6-201ENST00000249806 TMEM88BA6NKF7 163 aa22.25■■□□□ 1.15
CLN6-201ENST00000249806 ZBTB24O43167 697 aaPredicted RBP22.25■■□□□ 1.15
CLN6-201ENST00000249806 UNC5CO95185 931 aa22.25■■□□□ 1.15
CLN6-201ENST00000249806 CYS1Q717R9 158 aa22.25■■□□□ 1.15
CLN6-201ENST00000249806 ASRGL1Q7L266 308 aa22.25■■□□□ 1.15
CLN6-201ENST00000249806 NDUFAF2Q8N183 169 aa22.25■■□□□ 1.15
CLN6-201ENST00000249806 OR52K1Q8NGK4 314 aa22.25■■□□□ 1.15
CLN6-201ENST00000249806 RNF34Q969K3 372 aa22.25■■□□□ 1.15
CLN6-201ENST00000249806 MTBPQ96DY7 904 aa22.25■■□□□ 1.15
CLN6-201ENST00000249806 RPLP2P05387 115 aaKnown RBP22.25■■□□□ 1.15
CLN6-201ENST00000249806 CCNB1P14635 433 aa22.25■■□□□ 1.15
CLN6-201ENST00000249806 CCNFP41002 786 aa22.25■■□□□ 1.15
CLN6-201ENST00000249806 PPIDQ08752 370 aaKnown RBP22.25■■□□□ 1.15
CLN6-201ENST00000249806 ITGA7Q13683 1181 aa22.25■■□□□ 1.15
CLN6-201ENST00000249806 CRYMQ14894 314 aa22.25■■□□□ 1.15
CLN6-201ENST00000249806 PAXIP1Q6ZW49 1069 aaPredicted RBP22.25■■□□□ 1.15
CLN6-201ENST00000249806 NLRP9Q7RTR0 991 aa22.25■■□□□ 1.15
CLN6-201ENST00000249806 SUGP1Q8IWZ8 645 aaKnown RBP22.25■■□□□ 1.15
CLN6-201ENST00000249806 DCTN3O75935 186 aa22.24■■□□□ 1.15
CLN6-201ENST00000249806 TROVE2P10155 538 aaKnown RBP eCLIP22.24■■□□□ 1.15
CLN6-201ENST00000249806 PGAM1P18669 254 aa22.24■■□□□ 1.15
CLN6-201ENST00000249806 PGFP49763 221 aa22.24■■□□□ 1.15
CLN6-201ENST00000249806 MNAT1P51948 309 aa22.24■■□□□ 1.15
CLN6-201ENST00000249806 SMC1BQ8NDV3 1235 aa22.24■■□□□ 1.15
CLN6-201ENST00000249806 DQX1Q8TE96 717 aaKnown RBP22.24■■□□□ 1.15
CLN6-201ENST00000249806 IRGQQ8WZA9 623 aa22.24■■□□□ 1.15
CLN6-201ENST00000249806 CELF6Q96J87 481 aaKnown RBP22.24■■□□□ 1.15
CLN6-201ENST00000249806 EPAS1Q99814 870 aa22.24■■□□□ 1.15
CLN6-201ENST00000249806 CD248Q9HCU0 757 aa22.24■■□□□ 1.15
CLN6-201ENST00000249806 ARHGEF3Q9NR81 526 aa22.24■■□□□ 1.15
CLN6-201ENST00000249806 RNF186Q9NXI6 227 aa22.24■■□□□ 1.15
CLN6-201ENST00000249806 GTF3C5Q9Y5Q8 519 aaPredicted RBP22.24■■□□□ 1.15
CLN6-201ENST00000249806 PSAT1Q9Y617 370 aa22.24■■□□□ 1.15
CLN6-201ENST00000249806 A0A0G2JND7 137 aa22.23■■□□□ 1.15
CLN6-201ENST00000249806 C2CD2LO14523 706 aa22.23■■□□□ 1.15
CLN6-201ENST00000249806 B4GALT3O60512 393 aa22.23■■□□□ 1.15
CLN6-201ENST00000249806 KRT16P08779 473 aa22.23■■□□□ 1.15
CLN6-201ENST00000249806 SRGAP2BP0DMP2 458 aa22.23■■□□□ 1.15
CLN6-201ENST00000249806 TARSP26639 723 aaKnown RBP22.23■■□□□ 1.15
CLN6-201ENST00000249806 CD68P34810 354 aaPredicted RBP22.23■■□□□ 1.15
CLN6-201ENST00000249806 NIPAL4Q0D2K0 466 aa22.23■■□□□ 1.15
CLN6-201ENST00000249806 ZBTB17Q13105 803 aa22.23■■□□□ 1.15
CLN6-201ENST00000249806 SNCBQ16143 134 aa22.23■■□□□ 1.15
CLN6-201ENST00000249806 TRIM71Q2Q1W2 868 aaKnown RBP22.23■■□□□ 1.15
CLN6-201ENST00000249806 NCAM2O15394 837 aa22.23■■□□□ 1.15
CLN6-201ENST00000249806 SERPINB9P50453 376 aa22.23■■□□□ 1.15
CLN6-201ENST00000249806 MTDHQ86UE4 582 aaKnown RBP22.23■■□□□ 1.15
CLN6-201ENST00000249806 ZNF598Q86UK7 904 aaKnown RBP22.23■■□□□ 1.15
CLN6-201ENST00000249806 SIK2Q9H0K1 926 aa22.23■■□□□ 1.15
CLN6-201ENST00000249806 HAO1Q9UJM8 370 aa22.23■■□□□ 1.15
CLN6-201ENST00000249806 DSEQ9UL01 958 aa22.23■■□□□ 1.15
CLN6-201ENST00000249806 OR4Q2P0C623 313 aa22.22■■□□□ 1.15
CLN6-201ENST00000249806 ERVK-10P10266 1014 aa22.22■■□□□ 1.15
CLN6-201ENST00000249806 GARSP41250 739 aaKnown RBP22.22■■□□□ 1.15
CLN6-201ENST00000249806 MARK2Q7KZI7 788 aaKnown RBP22.22■■□□□ 1.15
CLN6-201ENST00000249806 RTN4RL1Q86UN2 441 aaPredicted RBP22.22■■□□□ 1.15
CLN6-201ENST00000249806 THEM5Q8N1Q8 247 aa22.22■■□□□ 1.15
CLN6-201ENST00000249806 FCRL3Q96P31 734 aaPredicted RBP22.22■■□□□ 1.15
CLN6-201ENST00000249806 TRIM55Q9BYV6 548 aa22.22■■□□□ 1.15
CLN6-201ENST00000249806 MAGED2Q9UNF1 606 aaPredicted RBP22.22■■□□□ 1.15
CLN6-201ENST00000249806 RAD54BQ9Y620 910 aa22.22■■□□□ 1.15
CLN6-201ENST00000249806 RPS6KL1Q9Y6S9 549 aa22.22■■□□□ 1.15
CLN6-201ENST00000249806 PTPRDP23468 1912 aa22.22■■□□□ 1.15
CLN6-201ENST00000249806 GALNT2Q10471 571 aa22.22■■□□□ 1.15
CLN6-201ENST00000249806 TAF1BQ53T94 588 aaPredicted RBP22.22■■□□□ 1.15
CLN6-201ENST00000249806 CES4AQ5XG92 561 aa22.22■■□□□ 1.15
CLN6-201ENST00000249806 DCLRE1AQ6PJP8 1040 aa22.22■■□□□ 1.15
CLN6-201ENST00000249806 PACS1Q6VY07 963 aa22.22■■□□□ 1.15
CLN6-201ENST00000249806 ZNF280BQ86YH2 543 aa22.22■■□□□ 1.15
CLN6-201ENST00000249806 APBB2Q92870 758 aa22.22■■□□□ 1.15
CLN6-201ENST00000249806 HDAC11Q96DB2 347 aa22.22■■□□□ 1.15
CLN6-201ENST00000249806 SUSD3Q96L08 255 aa22.22■■□□□ 1.15
CLN6-201ENST00000249806 TMEM237Q96Q45 408 aa22.22■■□□□ 1.15
CLN6-201ENST00000249806 KCNK13Q9HB14 408 aa22.22■■□□□ 1.15
CLN6-201ENST00000249806 STK38LQ9Y2H1 464 aa22.22■■□□□ 1.15
CLN6-201ENST00000249806 MRPL42Q9Y6G3 142 aaKnown RBP22.22■■□□□ 1.15
CLN6-201ENST00000249806 NLRC5Q86WI3 1866 aa22.21■■□□□ 1.15
CLN6-201ENST00000249806 T-ENOLP0DO92 83 aa22.21■■□□□ 1.15
CLN6-201ENST00000249806 CRHR1P34998 444 aa22.21■■□□□ 1.15
CLN6-201ENST00000249806 SKIV2L2P42285 1042 aaKnown RBP22.21■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms