RNA–Protein interactions for RNA: ENST00000248668.4

LRFN1-201, Transcript of leucine rich repeat and fibronectin type III domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRFN1, Length 3,381 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1-201ENST00000248668 HEY2Q9UBP5 337 aa16.2■□□□□ 0.18
LRFN1-201ENST00000248668 FAM237BA0A1B0GVD1 139 aa16.19■□□□□ 0.18
LRFN1-201ENST00000248668 CFAP73A6NFT4 308 aa16.19■□□□□ 0.18
LRFN1-201ENST00000248668 KRT38O76015 456 aa16.19■□□□□ 0.18
LRFN1-201ENST00000248668 EPHB2P29323 1055 aa16.19■□□□□ 0.18
LRFN1-201ENST00000248668 NUMBP49757 651 aa16.19■□□□□ 0.18
LRFN1-201ENST00000248668 FLT3LGP49771 235 aa16.19■□□□□ 0.18
LRFN1-201ENST00000248668 THEMIS2Q5TEJ8 643 aa16.19■□□□□ 0.18
LRFN1-201ENST00000248668 RGMBQ6NW40 437 aa16.19■□□□□ 0.18
LRFN1-201ENST00000248668 SPDYE1Q8NFV5 336 aaPredicted RBP16.19■□□□□ 0.18
LRFN1-201ENST00000248668 SOCS4Q8WXH5 440 aa16.19■□□□□ 0.18
LRFN1-201ENST00000248668 NT5C3BQ969T7 300 aa16.19■□□□□ 0.18
LRFN1-201ENST00000248668 TRIM55Q9BYV6 548 aa16.19■□□□□ 0.18
LRFN1-201ENST00000248668 FRMD8Q9BZ67 464 aaPredicted RBP16.19■□□□□ 0.18
LRFN1-201ENST00000248668 HOXC8P31273 242 aa16.19■□□□□ 0.18
LRFN1-201ENST00000248668 LHX1P48742 406 aa16.19■□□□□ 0.18
LRFN1-201ENST00000248668 DPYSQ14117 519 aa16.19■□□□□ 0.18
LRFN1-201ENST00000248668 CHI3L2Q15782 390 aa16.19■□□□□ 0.18
LRFN1-201ENST00000248668 LGSNQ5TDP6 509 aa16.19■□□□□ 0.18
LRFN1-201ENST00000248668 CES4AQ5XG92 561 aa16.19■□□□□ 0.18
LRFN1-201ENST00000248668 RWDD4Q6NW29 188 aaKnown RBP16.19■□□□□ 0.18
LRFN1-201ENST00000248668 TTC7BQ86TV6 843 aa16.19■□□□□ 0.18
LRFN1-201ENST00000248668 SAPCD2Q86UD0 394 aa16.19■□□□□ 0.18
LRFN1-201ENST00000248668 KCTD13Q8WZ19 329 aa16.19■□□□□ 0.18
LRFN1-201ENST00000248668 SDR42E2A6NKP2 422 aa16.18■□□□□ 0.18
LRFN1-201ENST00000248668 TRDMT1O14717 391 aaKnown RBP16.18■□□□□ 0.18
LRFN1-201ENST00000248668 ATP9BO43861 1147 aa16.18■□□□□ 0.18
LRFN1-201ENST00000248668 ASGR1P07306 291 aa16.18■□□□□ 0.18
LRFN1-201ENST00000248668 OR4Q2P0C623 313 aa16.18■□□□□ 0.18
LRFN1-201ENST00000248668 TPH1P17752 444 aa16.18■□□□□ 0.18
LRFN1-201ENST00000248668 SERPINB3P29508 390 aa16.18■□□□□ 0.18
LRFN1-201ENST00000248668 HACE1Q8IYU2 909 aa16.18■□□□□ 0.18
LRFN1-201ENST00000248668 DNAAF3Q8N9W5 541 aa16.18■□□□□ 0.18
LRFN1-201ENST00000248668 ADAM2Q99965 735 aa16.18■□□□□ 0.18
LRFN1-201ENST00000248668 LBHD1Q9BQE6 289 aaPredicted RBP16.18■□□□□ 0.18
LRFN1-201ENST00000248668 RTP3Q9BQQ7 232 aa16.18■□□□□ 0.18
LRFN1-201ENST00000248668 TMEM120AQ9BXJ8 343 aa16.18■□□□□ 0.18
LRFN1-201ENST00000248668 TRMT13Q9NUP7 481 aaKnown RBP16.18■□□□□ 0.18
LRFN1-201ENST00000248668 FAM159BA6NKW6 160 aa16.18■□□□□ 0.18
LRFN1-201ENST00000248668 ZNF487B1APH4 448 aa16.18■□□□□ 0.18
LRFN1-201ENST00000248668 GOLGA8TH3BQL2 631 aa16.18■□□□□ 0.18
LRFN1-201ENST00000248668 DCTN3O75935 186 aa16.18■□□□□ 0.18
LRFN1-201ENST00000248668 ELNP15502 786 aa16.18■□□□□ 0.18
LRFN1-201ENST00000248668 PRKD1Q15139 912 aaPredicted RBP16.18■□□□□ 0.18
LRFN1-201ENST00000248668 BZW1Q7L1Q6 419 aaKnown RBP16.18■□□□□ 0.18
LRFN1-201ENST00000248668 COLEC11Q9BWP8 271 aa16.18■□□□□ 0.18
LRFN1-201ENST00000248668 WDCPQ9H6R7 721 aa16.18■□□□□ 0.18
LRFN1-201ENST00000248668 PLLPQ9Y342 182 aa16.18■□□□□ 0.18
LRFN1-201ENST00000248668 KLHL33A6NCF5 533 aa16.18■□□□□ 0.18
LRFN1-201ENST00000248668 DCLK1O15075 740 aa16.18■□□□□ 0.18
LRFN1-201ENST00000248668 DHRS4L1P0CG22 281 aa16.18■□□□□ 0.18
LRFN1-201ENST00000248668 T-ENOLP0DO92 83 aa16.18■□□□□ 0.18
LRFN1-201ENST00000248668 FDFT1P37268 417 aa16.18■□□□□ 0.18
LRFN1-201ENST00000248668 ARFIP2P53365 341 aa16.18■□□□□ 0.18
LRFN1-201ENST00000248668 BST1Q10588 318 aa16.18■□□□□ 0.18
LRFN1-201ENST00000248668 UPP1Q16831 310 aa16.18■□□□□ 0.18
LRFN1-201ENST00000248668 LRRTM3Q86VH5 581 aa16.18■□□□□ 0.18
LRFN1-201ENST00000248668 ARNTL2Q8WYA1 636 aa16.18■□□□□ 0.18
LRFN1-201ENST00000248668 UTP4Q969X6 686 aaKnown RBP16.18■□□□□ 0.18
LRFN1-201ENST00000248668 AZIN2Q96A70 460 aa16.18■□□□□ 0.18
LRFN1-201ENST00000248668 LRRC39Q96DD0 335 aa16.18■□□□□ 0.18
LRFN1-201ENST00000248668 ARHGEF3Q9NR81 526 aa16.18■□□□□ 0.18
LRFN1-201ENST00000248668 ARMCX1Q9P291 453 aa16.18■□□□□ 0.18
LRFN1-201ENST00000248668 OR12D3Q9UGF7 316 aa16.18■□□□□ 0.18
LRFN1-201ENST00000248668 NOD1Q9Y239 953 aa16.18■□□□□ 0.18
LRFN1-201ENST00000248668 RPS6KL1Q9Y6S9 549 aa16.18■□□□□ 0.18
LRFN1-201ENST00000248668 LAMA2P24043 3122 aaKnown RBP16.17■□□□□ 0.18
LRFN1-201ENST00000248668 ZBTB24O43167 697 aaPredicted RBP16.17■□□□□ 0.18
LRFN1-201ENST00000248668 MYL2P10916 166 aa16.17■□□□□ 0.18
LRFN1-201ENST00000248668 PPM1JQ5JR12 505 aa16.17■□□□□ 0.18
LRFN1-201ENST00000248668 ASRGL1Q7L266 308 aa16.17■□□□□ 0.18
LRFN1-201ENST00000248668 SPC25Q9HBM1 224 aa16.17■□□□□ 0.18
LRFN1-201ENST00000248668 TXLNGQ9NUQ3 528 aa16.17■□□□□ 0.18
LRFN1-201ENST00000248668 Q9Y3F1 56 aa16.17■□□□□ 0.18
LRFN1-201ENST00000248668 SHROOM3Q8TF72 1996 aa16.17■□□□□ 0.18
LRFN1-201ENST00000248668 HACD1B0YJ81 288 aa16.17■□□□□ 0.18
LRFN1-201ENST00000248668 OPHN1O60890 802 aa16.17■□□□□ 0.18
LRFN1-201ENST00000248668 PTPN3P26045 913 aa16.17■□□□□ 0.18
LRFN1-201ENST00000248668 PGFP49763 221 aa16.17■□□□□ 0.18
LRFN1-201ENST00000248668 KCNA10Q16322 511 aa16.17■□□□□ 0.18
LRFN1-201ENST00000248668 SDHAF4Q5VUM1 108 aa16.17■□□□□ 0.18
LRFN1-201ENST00000248668 TAC4Q86UU9 113 aa16.17■□□□□ 0.18
LRFN1-201ENST00000248668 NUDCD3Q8IVD9 361 aa16.17■□□□□ 0.18
LRFN1-201ENST00000248668 OR10T2Q8NGX3 314 aa16.17■□□□□ 0.18
LRFN1-201ENST00000248668 AGAP11Q8TF27 550 aa16.17■□□□□ 0.18
LRFN1-201ENST00000248668 SMARCD1Q96GM5 515 aa16.17■□□□□ 0.18
LRFN1-201ENST00000248668 FERMT1Q9BQL6 677 aa16.17■□□□□ 0.18
LRFN1-201ENST00000248668 TPP1O14773 563 aa16.17■□□□□ 0.18
LRFN1-201ENST00000248668 MSI1O43347 362 aaKnown RBP16.17■□□□□ 0.18
LRFN1-201ENST00000248668 CYBAP13498 195 aa16.17■□□□□ 0.18
LRFN1-201ENST00000248668 CCND3P30281 292 aaPredicted RBP16.17■□□□□ 0.18
LRFN1-201ENST00000248668 ZBTB17Q13105 803 aa16.17■□□□□ 0.18
LRFN1-201ENST00000248668 SERINC5Q86VE9 423 aa16.17■□□□□ 0.18
LRFN1-201ENST00000248668 RASSF3Q86WH2 238 aa16.17■□□□□ 0.18
LRFN1-201ENST00000248668 ARID3BQ8IVW6 561 aaPredicted RBP16.17■□□□□ 0.18
LRFN1-201ENST00000248668 XPNPEP3Q9NQH7 507 aa16.17■□□□□ 0.18
LRFN1-201ENST00000248668 CNGB3Q9NQW8 809 aa16.17■□□□□ 0.18
LRFN1-201ENST00000248668 FBXW11Q9UKB1 542 aa16.17■□□□□ 0.18
LRFN1-201ENST00000248668 HHLA1C9JL84 531 aa16.16■□□□□ 0.18
LRFN1-201ENST00000248668 LRIG2O94898 1065 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms