RNA–Protein interactions for RNA: ENST00000248139.7

RAB40C-201, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB40C, Length 2,699 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-201ENST00000248139 PLD6Q8N2A8 252 aaKnown RBP26.23■■□□□ 1.79
RAB40C-201ENST00000248139 EFCAB3Q8N7B9 438 aa26.23■■□□□ 1.79
RAB40C-201ENST00000248139 SLC7A8Q9UHI5 535 aa26.23■■□□□ 1.79
RAB40C-201ENST00000248139 DPPA5A6NC42 116 aa26.23■■□□□ 1.79
RAB40C-201ENST00000248139 HUS1O60921 280 aa26.23■■□□□ 1.79
RAB40C-201ENST00000248139 TYK2P29597 1187 aa26.23■■□□□ 1.79
RAB40C-201ENST00000248139 WSCD1Q658N2 575 aa26.23■■□□□ 1.79
RAB40C-201ENST00000248139 RIPOR1Q6ZS17 1223 aa26.23■■□□□ 1.79
RAB40C-201ENST00000248139 ULK2Q8IYT8 1036 aa26.23■■□□□ 1.79
RAB40C-201ENST00000248139 CFAP61Q8NHU2 1237 aa26.23■■□□□ 1.79
RAB40C-201ENST00000248139 UBP1Q9NZI7 540 aa26.23■■□□□ 1.79
RAB40C-201ENST00000248139 RPL26L1Q9UNX3 145 aaKnown RBP26.23■■□□□ 1.79
RAB40C-201ENST00000248139 PLA2G4CQ9UP65 541 aa26.23■■□□□ 1.79
RAB40C-201ENST00000248139 ZNF487B1APH4 448 aa26.22■■□□□ 1.79
RAB40C-201ENST00000248139 BTBD19C9JJ37 291 aa26.22■■□□□ 1.79
RAB40C-201ENST00000248139 USP1O94782 785 aa26.22■■□□□ 1.79
RAB40C-201ENST00000248139 FDFT1P37268 417 aa26.22■■□□□ 1.79
RAB40C-201ENST00000248139 LILRA4P59901 499 aa26.22■■□□□ 1.79
RAB40C-201ENST00000248139 TSNAXIP1Q2TAA8 658 aa26.22■■□□□ 1.79
RAB40C-201ENST00000248139 EFHC1Q5JVL4 640 aa26.22■■□□□ 1.79
RAB40C-201ENST00000248139 TIFABQ6ZNK6 161 aa26.22■■□□□ 1.79
RAB40C-201ENST00000248139 SLC7A14Q8TBB6 771 aa26.22■■□□□ 1.79
RAB40C-201ENST00000248139 PIWIL2Q8TC59 973 aaKnown RBP26.22■■□□□ 1.79
RAB40C-201ENST00000248139 MAML3Q96JK9 1138 aa26.22■■□□□ 1.79
RAB40C-201ENST00000248139 KLHL8Q9P2G9 620 aaPredicted RBP26.22■■□□□ 1.79
RAB40C-201ENST00000248139 BIRC5O15392 142 aa26.22■■□□□ 1.79
RAB40C-201ENST00000248139 TREHO43280 583 aa26.22■■□□□ 1.79
RAB40C-201ENST00000248139 TAF6P49848 677 aa26.22■■□□□ 1.79
RAB40C-201ENST00000248139 TUBB3Q13509 450 aa26.22■■□□□ 1.79
RAB40C-201ENST00000248139 NPLOC4Q8TAT6 608 aa26.22■■□□□ 1.79
RAB40C-201ENST00000248139 SH3TC2Q8TF17 1288 aa26.22■■□□□ 1.79
RAB40C-201ENST00000248139 CDKL2Q92772 493 aa26.22■■□□□ 1.79
RAB40C-201ENST00000248139 KCNK16Q96T55 309 aa26.22■■□□□ 1.79
RAB40C-201ENST00000248139 MED10Q9BTT4 135 aa26.22■■□□□ 1.79
RAB40C-201ENST00000248139 EEF2KO00418 725 aaKnown RBP26.22■■□□□ 1.79
RAB40C-201ENST00000248139 PGAM1P18669 254 aa26.22■■□□□ 1.79
RAB40C-201ENST00000248139 AFF1P51825 1210 aaKnown RBP26.22■■□□□ 1.79
RAB40C-201ENST00000248139 CCNA1P78396 465 aa26.22■■□□□ 1.79
RAB40C-201ENST00000248139 DEUP1Q05D60 604 aa26.22■■□□□ 1.79
RAB40C-201ENST00000248139 IFRD2Q12894 506 aaPredicted RBP26.22■■□□□ 1.79
RAB40C-201ENST00000248139 ITGA9Q13797 1035 aa26.22■■□□□ 1.79
RAB40C-201ENST00000248139 RALGPS1Q5JS13 557 aa26.22■■□□□ 1.79
RAB40C-201ENST00000248139 DPY19L2Q6NUT2 758 aa26.22■■□□□ 1.79
RAB40C-201ENST00000248139 GPR142Q7Z601 462 aa26.22■■□□□ 1.79
RAB40C-201ENST00000248139 ACVR1CQ8NER5 493 aa26.22■■□□□ 1.79
RAB40C-201ENST00000248139 HSFY1Q96LI6 401 aa26.22■■□□□ 1.79
RAB40C-201ENST00000248139 TTC1Q99614 292 aa26.22■■□□□ 1.79
RAB40C-201ENST00000248139 SYT15Q9BQS2 421 aa26.22■■□□□ 1.79
RAB40C-201ENST00000248139 MAN1C1Q9NR34 630 aa26.22■■□□□ 1.79
RAB40C-201ENST00000248139 GTF2IRD1Q9UHL9 959 aa26.22■■□□□ 1.79
RAB40C-201ENST00000248139 ZMPSTE24O75844 475 aa26.21■■□□□ 1.79
RAB40C-201ENST00000248139 LUC7L3O95232 432 aaKnown RBP26.21■■□□□ 1.79
RAB40C-201ENST00000248139 LINGO3P0C6S8 592 aa26.21■■□□□ 1.79
RAB40C-201ENST00000248139 TPH1P17752 444 aa26.21■■□□□ 1.79
RAB40C-201ENST00000248139 PEX19P40855 299 aa26.21■■□□□ 1.79
RAB40C-201ENST00000248139 PPP2R5DQ14738 602 aa26.21■■□□□ 1.79
RAB40C-201ENST00000248139 KYAT3Q6YP21 454 aaKnown RBP26.21■■□□□ 1.79
RAB40C-201ENST00000248139 FAM124BQ9H5Z6 455 aaPredicted RBP26.21■■□□□ 1.79
RAB40C-201ENST00000248139 LRRC4Q9HBW1 653 aa26.21■■□□□ 1.79
RAB40C-201ENST00000248139 TXNDC16Q9P2K2 825 aa26.21■■□□□ 1.79
RAB40C-201ENST00000248139 XPO1O14980 1071 aaKnown RBP26.21■■□□□ 1.79
RAB40C-201ENST00000248139 MAP3K13O43283 966 aa26.21■■□□□ 1.79
RAB40C-201ENST00000248139 ATP9BO43861 1147 aa26.21■■□□□ 1.79
RAB40C-201ENST00000248139 ACADSBP45954 432 aa26.21■■□□□ 1.79
RAB40C-201ENST00000248139 USP4Q13107 963 aa26.21■■□□□ 1.79
RAB40C-201ENST00000248139 WDR75Q8IWA0 830 aaKnown RBP26.21■■□□□ 1.79
RAB40C-201ENST00000248139 ZNF669Q96BR6 464 aaPredicted RBP26.21■■□□□ 1.79
RAB40C-201ENST00000248139 GORASP1Q9BQQ3 440 aa26.21■■□□□ 1.79
RAB40C-201ENST00000248139 DUSP16Q9BY84 665 aa26.21■■□□□ 1.79
RAB40C-201ENST00000248139 TMEM30AQ9NV96 361 aa26.21■■□□□ 1.79
RAB40C-201ENST00000248139 LOC100653049A0A140TA62 436 aa26.2■■□□□ 1.78
RAB40C-201ENST00000248139 KRT34O76011 436 aa26.2■■□□□ 1.78
RAB40C-201ENST00000248139 BAG2O95816 211 aa26.2■■□□□ 1.78
RAB40C-201ENST00000248139 FYNP06241 537 aa26.2■■□□□ 1.78
RAB40C-201ENST00000248139 SERPINA6P08185 405 aa26.2■■□□□ 1.78
RAB40C-201ENST00000248139 CD1EP15812 388 aa26.2■■□□□ 1.78
RAB40C-201ENST00000248139 ERCC2P18074 760 aa26.2■■□□□ 1.78
RAB40C-201ENST00000248139 RPL34P49207 117 aaKnown RBP26.2■■□□□ 1.78
RAB40C-201ENST00000248139 IRF9Q00978 393 aa26.2■■□□□ 1.78
RAB40C-201ENST00000248139 GPRIN1Q7Z2K8 1008 aa26.2■■□□□ 1.78
RAB40C-201ENST00000248139 GSTCDQ8NEC7 633 aa26.2■■□□□ 1.78
RAB40C-201ENST00000248139 MFSD3Q96ES6 412 aa26.2■■□□□ 1.78
RAB40C-201ENST00000248139 SORT1Q99523 831 aa26.2■■□□□ 1.78
RAB40C-201ENST00000248139 KRT82Q9NSB4 513 aa26.2■■□□□ 1.78
RAB40C-201ENST00000248139 YJEFN3A6XGL0 299 aa26.2■■□□□ 1.78
RAB40C-201ENST00000248139 OPHN1O60890 802 aa26.2■■□□□ 1.78
RAB40C-201ENST00000248139 GLRA3O75311 464 aa26.2■■□□□ 1.78
RAB40C-201ENST00000248139 TKTL1P51854 596 aa26.2■■□□□ 1.78
RAB40C-201ENST00000248139 CACNA2D1P54289 1103 aa26.2■■□□□ 1.78
RAB40C-201ENST00000248139 SNX17Q15036 470 aa26.2■■□□□ 1.78
RAB40C-201ENST00000248139 UBXN11Q5T124 520 aa26.2■■□□□ 1.78
RAB40C-201ENST00000248139 CERCAMQ5T4B2 595 aa26.2■■□□□ 1.78
RAB40C-201ENST00000248139 FAM91A1Q658Y4 838 aa26.2■■□□□ 1.78
RAB40C-201ENST00000248139 CLEC20AQ6ZU45 233 aa26.2■■□□□ 1.78
RAB40C-201ENST00000248139 ARCQ7LC44 396 aa26.2■■□□□ 1.78
RAB40C-201ENST00000248139 DCLK2Q8N568 766 aa26.2■■□□□ 1.78
RAB40C-201ENST00000248139 DNAAF3Q8N9W5 541 aa26.2■■□□□ 1.78
RAB40C-201ENST00000248139 CERS2Q96G23 380 aa26.2■■□□□ 1.78
RAB40C-201ENST00000248139 NPY6RQ99463 290 aa26.2■■□□□ 1.78
RAB40C-201ENST00000248139 STX18Q9P2W9 335 aaKnown RBP26.2■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms