RNA–Protein interactions for RNA: ENST00000247225.6

SGPP1-201, Transcript of sphingosine-1-phosphate phosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGPP1, Length 3,312 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGPP1-201ENST00000247225 IL1RL2Q9HB29 575 aa17.3■□□□□ 0.36
SGPP1-201ENST00000247225 DPP3Q9NY33 737 aa17.3■□□□□ 0.36
SGPP1-201ENST00000247225 EFR3BQ9Y2G0 817 aa17.3■□□□□ 0.36
SGPP1-201ENST00000247225 A0A096LPK6 155 aa17.29■□□□□ 0.36
SGPP1-201ENST00000247225 TK2O00142 265 aa17.29■□□□□ 0.36
SGPP1-201ENST00000247225 TRDMT1O14717 391 aaKnown RBP17.29■□□□□ 0.36
SGPP1-201ENST00000247225 GLRA3O75311 464 aa17.29■□□□□ 0.36
SGPP1-201ENST00000247225 GMPSP49915 693 aaPredicted RBP17.29■□□□□ 0.36
SGPP1-201ENST00000247225 POU5F1BQ06416 359 aa17.29■□□□□ 0.36
SGPP1-201ENST00000247225 DYNC1I2Q13409 638 aaKnown RBP17.29■□□□□ 0.36
SGPP1-201ENST00000247225 TREML2Q5T2D2 321 aa17.29■□□□□ 0.36
SGPP1-201ENST00000247225 TTC30AQ86WT1 665 aa17.29■□□□□ 0.36
SGPP1-201ENST00000247225 BHLHE22Q8NFJ8 381 aaPredicted RBP17.29■□□□□ 0.36
SGPP1-201ENST00000247225 LHX5Q9H2C1 402 aa17.29■□□□□ 0.36
SGPP1-201ENST00000247225 CYP4F12Q9HCS2 524 aa17.29■□□□□ 0.36
SGPP1-201ENST00000247225 DMAP1Q9NPF5 467 aaPredicted RBP17.29■□□□□ 0.36
SGPP1-201ENST00000247225 SNX15Q9NRS6 342 aa17.29■□□□□ 0.36
SGPP1-201ENST00000247225 IARS2Q9NSE4 1012 aaKnown RBP17.29■□□□□ 0.36
SGPP1-201ENST00000247225 TMEM233B4DJY2 109 aa17.29■□□□□ 0.36
SGPP1-201ENST00000247225 TSPAN8P19075 237 aa17.29■□□□□ 0.36
SGPP1-201ENST00000247225 MX2P20592 715 aa17.29■□□□□ 0.36
SGPP1-201ENST00000247225 PRKCHP24723 683 aa17.29■□□□□ 0.36
SGPP1-201ENST00000247225 RPL10P27635 214 aaKnown RBP17.29■□□□□ 0.36
SGPP1-201ENST00000247225 CHN2P52757 468 aa17.29■□□□□ 0.36
SGPP1-201ENST00000247225 KLF10Q13118 480 aa17.29■□□□□ 0.36
SGPP1-201ENST00000247225 IFT43Q96FT9 208 aa17.29■□□□□ 0.36
SGPP1-201ENST00000247225 TCF7L2Q9NQB0 619 aa17.29■□□□□ 0.36
SGPP1-201ENST00000247225 DTLQ9NZJ0 730 aa17.29■□□□□ 0.36
SGPP1-201ENST00000247225 COPG2Q9UBF2 871 aa17.29■□□□□ 0.36
SGPP1-201ENST00000247225 ACKR2O00590 384 aa17.29■□□□□ 0.36
SGPP1-201ENST00000247225 PLSCR1O15162 318 aa17.29■□□□□ 0.36
SGPP1-201ENST00000247225 ACAT1P24752 427 aaKnown RBP17.29■□□□□ 0.36
SGPP1-201ENST00000247225 ETFBP38117 255 aa17.29■□□□□ 0.36
SGPP1-201ENST00000247225 GABRB2P47870 512 aa17.29■□□□□ 0.36
SGPP1-201ENST00000247225 PLK1P53350 603 aa17.29■□□□□ 0.36
SGPP1-201ENST00000247225 GSTA3Q16772 222 aa17.29■□□□□ 0.36
SGPP1-201ENST00000247225 CERCAMQ5T4B2 595 aa17.29■□□□□ 0.36
SGPP1-201ENST00000247225 ZNF534Q76KX8 674 aa17.29■□□□□ 0.36
SGPP1-201ENST00000247225 AMIGO2Q86SJ2 522 aa17.29■□□□□ 0.36
SGPP1-201ENST00000247225 DIS3LQ8TF46 1054 aaKnown RBP17.29■□□□□ 0.36
SGPP1-201ENST00000247225 DCUN1D1Q96GG9 259 aa17.29■□□□□ 0.36
SGPP1-201ENST00000247225 CAAP1Q9H8G2 361 aa17.29■□□□□ 0.36
SGPP1-201ENST00000247225 AS3MTQ9HBK9 375 aa17.29■□□□□ 0.36
SGPP1-201ENST00000247225 GTSE1Q9NYZ3 720 aa17.29■□□□□ 0.36
SGPP1-201ENST00000247225 CITO14578 2027 aa17.28■□□□□ 0.36
SGPP1-201ENST00000247225 HDCP19113 662 aa17.28■□□□□ 0.36
SGPP1-201ENST00000247225 THOP1P52888 689 aa17.28■□□□□ 0.36
SGPP1-201ENST00000247225 MXD4Q14582 209 aaPredicted RBP17.28■□□□□ 0.36
SGPP1-201ENST00000247225 SURF1Q15526 300 aa17.28■□□□□ 0.36
SGPP1-201ENST00000247225 CYP4V2Q6ZWL3 525 aaPredicted RBP17.28■□□□□ 0.36
SGPP1-201ENST00000247225 RTKN2Q8IZC4 609 aa17.28■□□□□ 0.36
SGPP1-201ENST00000247225 FBXW8Q8N3Y1 598 aa17.28■□□□□ 0.36
SGPP1-201ENST00000247225 MRPL1Q9BYD6 325 aaKnown RBP17.28■□□□□ 0.36
SGPP1-201ENST00000247225 ATXN3LQ9H3M9 355 aa17.28■□□□□ 0.36
SGPP1-201ENST00000247225 MFSD11O43934 449 aa17.28■□□□□ 0.36
SGPP1-201ENST00000247225 SNNO75324 88 aaPredicted RBP17.28■□□□□ 0.36
SGPP1-201ENST00000247225 SERPINB9P50453 376 aa17.28■□□□□ 0.36
SGPP1-201ENST00000247225 SOWAHAQ2M3V2 549 aa17.28■□□□□ 0.36
SGPP1-201ENST00000247225 FNIP1Q8TF40 1166 aa17.28■□□□□ 0.36
SGPP1-201ENST00000247225 C18orf25Q96B23 403 aaPredicted RBP17.28■□□□□ 0.36
SGPP1-201ENST00000247225 P2RY11Q96G91 374 aa17.28■□□□□ 0.36
SGPP1-201ENST00000247225 OLFM3Q96PB7 478 aa17.28■□□□□ 0.36
SGPP1-201ENST00000247225 CSPG4P5Q96PW8 444 aa17.28■□□□□ 0.36
SGPP1-201ENST00000247225 KCTD15Q96SI1 283 aaPredicted RBP17.28■□□□□ 0.36
SGPP1-201ENST00000247225 TBCBQ99426 244 aa17.28■□□□□ 0.36
SGPP1-201ENST00000247225 PRDM12Q9H4Q4 367 aa17.28■□□□□ 0.36
SGPP1-201ENST00000247225 MAP3K20Q9NYL2 800 aaKnown RBP17.28■□□□□ 0.36
SGPP1-201ENST00000247225 BARX2Q9UMQ3 279 aaPredicted RBP17.28■□□□□ 0.36
SGPP1-201ENST00000247225 FAM159BA6NKW6 160 aa17.27■□□□□ 0.36
SGPP1-201ENST00000247225 KLF11O14901 512 aa17.27■□□□□ 0.36
SGPP1-201ENST00000247225 FAM189A1O60320 539 aa17.27■□□□□ 0.36
SGPP1-201ENST00000247225 AKAP5P24588 427 aa17.27■□□□□ 0.36
SGPP1-201ENST00000247225 R3HDM1Q15032 1099 aaKnown RBP17.27■□□□□ 0.36
SGPP1-201ENST00000247225 SLC10A6Q3KNW5 377 aa17.27■□□□□ 0.36
SGPP1-201ENST00000247225 TMCO4Q5TGY1 634 aa17.27■□□□□ 0.36
SGPP1-201ENST00000247225 XRRA1Q6P2D8 792 aa17.27■□□□□ 0.36
SGPP1-201ENST00000247225 ACAD11Q709F0 780 aa17.27■□□□□ 0.36
SGPP1-201ENST00000247225 TRIML2Q8N7C3 387 aa17.27■□□□□ 0.36
SGPP1-201ENST00000247225 FAM192AQ9GZU8 254 aa17.27■□□□□ 0.36
SGPP1-201ENST00000247225 TRPV6Q9H1D0 765 aa17.27■□□□□ 0.36
SGPP1-201ENST00000247225 HOXC10Q9NYD6 342 aa17.27■□□□□ 0.36
SGPP1-201ENST00000247225 CACNG4Q9UBN1 327 aa17.27■□□□□ 0.36
SGPP1-201ENST00000247225 SNX10Q9Y5X0 201 aa17.27■□□□□ 0.36
SGPP1-201ENST00000247225 C9JVG2 144 aa17.27■□□□□ 0.36
SGPP1-201ENST00000247225 FOXD2O60548 495 aaPredicted RBP17.27■□□□□ 0.36
SGPP1-201ENST00000247225 PIGRP01833 764 aa17.27■□□□□ 0.36
SGPP1-201ENST00000247225 TXNP10599 105 aaKnown RBP17.27■□□□□ 0.36
SGPP1-201ENST00000247225 CDH5P33151 784 aaPredicted RBP17.27■□□□□ 0.36
SGPP1-201ENST00000247225 GNL1P36915 607 aaPredicted RBP17.27■□□□□ 0.36
SGPP1-201ENST00000247225 KIZQ2M2Z5 673 aa17.27■□□□□ 0.36
SGPP1-201ENST00000247225 EXT2Q93063 718 aa17.27■□□□□ 0.36
SGPP1-201ENST00000247225 EME1Q96AY2 570 aa17.27■□□□□ 0.36
SGPP1-201ENST00000247225 CELF6Q96J87 481 aaKnown RBP17.27■□□□□ 0.36
SGPP1-201ENST00000247225 TSNARE1Q96NA8 513 aa17.27■□□□□ 0.36
SGPP1-201ENST00000247225 FRMD8P1Q9BZ68 369 aaPredicted RBP17.27■□□□□ 0.36
SGPP1-201ENST00000247225 PCDHAC1Q9H158 963 aa17.27■□□□□ 0.36
SGPP1-201ENST00000247225 GALNT8Q9NY28 637 aa17.27■□□□□ 0.36
SGPP1-201ENST00000247225 TLK1Q9UKI8 766 aa17.27■□□□□ 0.36
SGPP1-201ENST00000247225 AP4B1Q9Y6B7 739 aa17.27■□□□□ 0.36
SGPP1-201ENST00000247225 GREB1LQ9C091 1923 aaPredicted RBP17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms