RNA–Protein interactions for RNA: ENST00000247020.8

SDF2-201, Transcript of stromal cell derived factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDF2, Length 1,568 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-201ENST00000247020 RB1P06400 928 aa14.6□□□□□ -0.07
SDF2-201ENST00000247020 ABHD2P08910 425 aa14.6□□□□□ -0.07
SDF2-201ENST00000247020 CNPP09543 421 aaKnown RBP14.6□□□□□ -0.07
SDF2-201ENST00000247020 VAV1P15498 845 aa14.6□□□□□ -0.07
SDF2-201ENST00000247020 TPSB2P20231 275 aa14.6□□□□□ -0.07
SDF2-201ENST00000247020 BASP1P80723 227 aaKnown RBP14.6□□□□□ -0.07
SDF2-201ENST00000247020 TWF1Q12792 350 aa14.6□□□□□ -0.07
SDF2-201ENST00000247020 TPSAB1Q15661 275 aa14.6□□□□□ -0.07
SDF2-201ENST00000247020 PABPC1LQ4VXU2 614 aaKnown RBP14.6□□□□□ -0.07
SDF2-201ENST00000247020 ARTNQ5T4W7 220 aa14.6□□□□□ -0.07
SDF2-201ENST00000247020 PIK3R6Q5UE93 754 aa14.6□□□□□ -0.07
SDF2-201ENST00000247020 LILRA6Q6PI73 481 aa14.6□□□□□ -0.07
SDF2-201ENST00000247020 TMC7Q7Z402 723 aa14.6□□□□□ -0.07
SDF2-201ENST00000247020 RTL3Q8N8U3 475 aaKnown RBP14.6□□□□□ -0.07
SDF2-201ENST00000247020 AUTS2Q8WXX7 1259 aa14.6□□□□□ -0.07
SDF2-201ENST00000247020 TSGA13Q96PP4 275 aa14.6□□□□□ -0.07
SDF2-201ENST00000247020 SEMA4AQ9H3S1 761 aa14.6□□□□□ -0.07
SDF2-201ENST00000247020 CCSER2Q9H7U1 834 aa14.6□□□□□ -0.07
SDF2-201ENST00000247020 GBF1Q92538 1859 aa14.6□□□□□ -0.07
SDF2-201ENST00000247020 SHROOM3Q8TF72 1996 aa14.6□□□□□ -0.07
SDF2-201ENST00000247020 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP14.6□□□□□ -0.07
SDF2-201ENST00000247020 CXCL14O95715 111 aa14.6□□□□□ -0.07
SDF2-201ENST00000247020 MOCS2O96007 188 aaPredicted RBP14.6□□□□□ -0.07
SDF2-201ENST00000247020 SRGAP2BP0DMP2 458 aa14.6□□□□□ -0.07
SDF2-201ENST00000247020 TSHRP16473 764 aa14.6□□□□□ -0.07
SDF2-201ENST00000247020 RHOQP17081 205 aa14.6□□□□□ -0.07
SDF2-201ENST00000247020 CTNNB1P35222 781 aa14.6□□□□□ -0.07
SDF2-201ENST00000247020 GARSP41250 739 aaKnown RBP14.6□□□□□ -0.07
SDF2-201ENST00000247020 FAM193AP78312 1265 aa14.6□□□□□ -0.07
SDF2-201ENST00000247020 CDK16Q00536 496 aa14.6□□□□□ -0.07
SDF2-201ENST00000247020 AP1B1Q10567 949 aa14.6□□□□□ -0.07
SDF2-201ENST00000247020 SEMA5AQ13591 1074 aa14.6□□□□□ -0.07
SDF2-201ENST00000247020 HIF1AQ16665 826 aa14.6□□□□□ -0.07
SDF2-201ENST00000247020 MS4A13Q5J8X5 152 aa14.6□□□□□ -0.07
SDF2-201ENST00000247020 ANKRD20A2Q5SQ80 823 aa14.6□□□□□ -0.07
SDF2-201ENST00000247020 ANKRD20A1Q5TYW2 823 aa14.6□□□□□ -0.07
SDF2-201ENST00000247020 ANKRD20A3Q5VUR7 823 aa14.6□□□□□ -0.07
SDF2-201ENST00000247020 RWDD4Q6NW29 188 aaKnown RBP14.6□□□□□ -0.07
SDF2-201ENST00000247020 ARHGEF18Q6ZSZ5 1173 aa14.6□□□□□ -0.07
SDF2-201ENST00000247020 ZNF683Q8IZ20 524 aa14.6□□□□□ -0.07
SDF2-201ENST00000247020 NPWQ8N729 165 aa14.6□□□□□ -0.07
SDF2-201ENST00000247020 MCUQ8NE86 351 aa14.6□□□□□ -0.07
SDF2-201ENST00000247020 P2RY11Q96G91 374 aa14.6□□□□□ -0.07
SDF2-201ENST00000247020 SAMD11Q96NU1 681 aa14.6□□□□□ -0.07
SDF2-201ENST00000247020 KLHL5Q96PQ7 755 aa14.6□□□□□ -0.07
SDF2-201ENST00000247020 LGMNQ99538 433 aa14.6□□□□□ -0.07
SDF2-201ENST00000247020 ROPN1BQ9BZX4 212 aaPredicted RBP14.6□□□□□ -0.07
SDF2-201ENST00000247020 ZYG11BQ9C0D3 744 aa14.6□□□□□ -0.07
SDF2-201ENST00000247020 ROPN1Q9HAT0 212 aaPredicted RBP14.6□□□□□ -0.07
SDF2-201ENST00000247020 RAB6BQ9NRW1 208 aa14.6□□□□□ -0.07
SDF2-201ENST00000247020 SNX10Q9Y5X0 201 aa14.6□□□□□ -0.07
SDF2-201ENST00000247020 ALOX15BO15296 676 aa14.59□□□□□ -0.07
SDF2-201ENST00000247020 TGM5O43548 720 aa14.59□□□□□ -0.07
SDF2-201ENST00000247020 LATS1O95835 1130 aa14.59□□□□□ -0.07
SDF2-201ENST00000247020 TBX18O95935 607 aa14.59□□□□□ -0.07
SDF2-201ENST00000247020 OAS1P00973 400 aaKnown RBP14.59□□□□□ -0.07
SDF2-201ENST00000247020 CCNCP24863 283 aa14.59□□□□□ -0.07
SDF2-201ENST00000247020 MAGEA4P43358 317 aa14.59□□□□□ -0.07
SDF2-201ENST00000247020 NDST2P52849 883 aa14.59□□□□□ -0.07
SDF2-201ENST00000247020 SLC29A2Q14542 456 aa14.59□□□□□ -0.07
SDF2-201ENST00000247020 C5orf22Q49AR2 442 aa14.59□□□□□ -0.07
SDF2-201ENST00000247020 AFMIDQ63HM1 303 aa14.59□□□□□ -0.07
SDF2-201ENST00000247020 DNAJB7Q7Z6W7 309 aaPredicted RBP14.59□□□□□ -0.07
SDF2-201ENST00000247020 NLRP14Q86W24 1093 aa14.59□□□□□ -0.07
SDF2-201ENST00000247020 MIB1Q86YT6 1006 aa14.59□□□□□ -0.07
SDF2-201ENST00000247020 PDIK1LQ8N165 341 aa14.59□□□□□ -0.07
SDF2-201ENST00000247020 CCNYQ8ND76 341 aa14.59□□□□□ -0.07
SDF2-201ENST00000247020 NUP205Q92621 2012 aa14.59□□□□□ -0.07
SDF2-201ENST00000247020 PRMT1Q99873 361 aaKnown RBP14.59□□□□□ -0.07
SDF2-201ENST00000247020 EIF2B3Q9NR50 452 aaKnown RBP14.59□□□□□ -0.07
SDF2-201ENST00000247020 TMEM248Q9NWD8 314 aa14.59□□□□□ -0.07
SDF2-201ENST00000247020 IGSF9Q9P2J2 1179 aa14.59□□□□□ -0.07
SDF2-201ENST00000247020 TRHDEQ9UKU6 1024 aa14.59□□□□□ -0.07
SDF2-201ENST00000247020 NYNRINQ9P2P1 1898 aaKnown RBP14.58□□□□□ -0.08
SDF2-201ENST00000247020 LINC01553A4QN01 128 aa14.58□□□□□ -0.08
SDF2-201ENST00000247020 DRGXA6NNA5 263 aa14.58□□□□□ -0.08
SDF2-201ENST00000247020 RNF103O00237 685 aa14.58□□□□□ -0.08
SDF2-201ENST00000247020 RNF40O75150 1001 aa14.58□□□□□ -0.08
SDF2-201ENST00000247020 TMEM63AO94886 807 aa14.58□□□□□ -0.08
SDF2-201ENST00000247020 LRG1P02750 347 aa14.58□□□□□ -0.08
SDF2-201ENST00000247020 F11P03951 625 aa14.58□□□□□ -0.08
SDF2-201ENST00000247020 MYZAPP0CAP1 466 aa14.58□□□□□ -0.08
SDF2-201ENST00000247020 SYN1P17600 705 aa14.58□□□□□ -0.08
SDF2-201ENST00000247020 PFKLP17858 780 aa14.58□□□□□ -0.08
SDF2-201ENST00000247020 ZNF844Q08AG5 666 aa14.58□□□□□ -0.08
SDF2-201ENST00000247020 IFFO1Q0D2I5 559 aa14.58□□□□□ -0.08
SDF2-201ENST00000247020 AUHQ13825 339 aaKnown RBP14.58□□□□□ -0.08
SDF2-201ENST00000247020 CEP85LQ5SZL2 805 aa14.58□□□□□ -0.08
SDF2-201ENST00000247020 AGBL2Q5U5Z8 902 aa14.58□□□□□ -0.08
SDF2-201ENST00000247020 TIGD7Q6NT04 549 aaPredicted RBP14.58□□□□□ -0.08
SDF2-201ENST00000247020 CCDC13Q8IYE1 715 aa14.58□□□□□ -0.08
SDF2-201ENST00000247020 UMODL1-AS1Q8N2C9 162 aa14.58□□□□□ -0.08
SDF2-201ENST00000247020 CCDC110Q8TBZ0 833 aa14.58□□□□□ -0.08
SDF2-201ENST00000247020 DPF3Q92784 378 aa14.58□□□□□ -0.08
SDF2-201ENST00000247020 FATE1Q969F0 183 aa14.58□□□□□ -0.08
SDF2-201ENST00000247020 TCF25Q9BQ70 676 aa14.58□□□□□ -0.08
SDF2-201ENST00000247020 NACA2Q9H009 215 aa14.58□□□□□ -0.08
SDF2-201ENST00000247020 TMBIM4Q9HC24 238 aa14.58□□□□□ -0.08
SDF2-201ENST00000247020 ENTPD7Q9NQZ7 604 aa14.58□□□□□ -0.08
SDF2-201ENST00000247020 TLR9Q9NR96 1032 aa14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms