RNA–Protein interactions for RNA: ENST00000243563.7

SNRPA-201, Transcript of small nuclear ribonucleoprotein polypeptide A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRPA, Length 1,621 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA-201ENST00000243563 HOXC13P31276 330 aa20.78■□□□□ 0.92
SNRPA-201ENST00000243563 TPI1P60174 286 aa20.78■□□□□ 0.92
SNRPA-201ENST00000243563 PUS10Q3MIT2 529 aaKnown RBP20.78■□□□□ 0.92
SNRPA-201ENST00000243563 C5orf22Q49AR2 442 aa20.78■□□□□ 0.92
SNRPA-201ENST00000243563 ANKRD20A8PQ5CZ79 823 aa20.78■□□□□ 0.92
SNRPA-201ENST00000243563 RHBDF2Q6PJF5 856 aa20.78■□□□□ 0.92
SNRPA-201ENST00000243563 RFX8Q6ZV50 586 aa20.78■□□□□ 0.92
SNRPA-201ENST00000243563 MTSS1LQ765P7 747 aa20.78■□□□□ 0.92
SNRPA-201ENST00000243563 CCDC50Q8IVM0 306 aa20.78■□□□□ 0.92
SNRPA-201ENST00000243563 OSBPL9Q96SU4 736 aa20.78■□□□□ 0.92
SNRPA-201ENST00000243563 HEMGNQ9BXL5 484 aa20.78■□□□□ 0.92
SNRPA-201ENST00000243563 KCNK12Q9HB15 430 aa20.78■□□□□ 0.92
SNRPA-201ENST00000243563 ARHGEF4Q9NR80 690 aa20.78■□□□□ 0.92
SNRPA-201ENST00000243563 NR2E1Q9Y466 385 aa20.78■□□□□ 0.92
SNRPA-201ENST00000243563 hCG_1818297A0A087WSY0 165 aa20.77■□□□□ 0.92
SNRPA-201ENST00000243563 CTAGE9A4FU28 777 aa20.77■□□□□ 0.92
SNRPA-201ENST00000243563 ARNTLO00327 626 aa20.77■□□□□ 0.92
SNRPA-201ENST00000243563 CASQ1P31415 396 aa20.77■□□□□ 0.92
SNRPA-201ENST00000243563 PDK2Q15119 407 aa20.77■□□□□ 0.92
SNRPA-201ENST00000243563 LY6G5CQ5SRR4 150 aa20.77■□□□□ 0.92
SNRPA-201ENST00000243563 FYB2Q5VWT5 728 aa20.77■□□□□ 0.92
SNRPA-201ENST00000243563 RWDD4Q6NW29 188 aaKnown RBP20.77■□□□□ 0.92
SNRPA-201ENST00000243563 RCOR2Q8IZ40 523 aa20.77■□□□□ 0.92
SNRPA-201ENST00000243563 TTC8Q8TAM2 541 aa20.77■□□□□ 0.92
SNRPA-201ENST00000243563 WFDC5Q8TCV5 224 aa20.77■□□□□ 0.92
SNRPA-201ENST00000243563 TBC1D31Q96DN5 1066 aa20.77■□□□□ 0.92
SNRPA-201ENST00000243563 MS4A14Q96JA4 679 aa20.77■□□□□ 0.92
SNRPA-201ENST00000243563 EPAS1Q99814 870 aa20.77■□□□□ 0.92
SNRPA-201ENST00000243563 ZNF670Q9BS34 389 aa20.77■□□□□ 0.92
SNRPA-201ENST00000243563 STIM2Q9P246 746 aa20.77■□□□□ 0.92
SNRPA-201ENST00000243563 EPHB2P29323 1055 aa20.76■□□□□ 0.91
SNRPA-201ENST00000243563 GDI1P31150 447 aa20.76■□□□□ 0.91
SNRPA-201ENST00000243563 IFNAR2P48551 515 aa20.76■□□□□ 0.91
SNRPA-201ENST00000243563 ZP2Q05996 745 aa20.76■□□□□ 0.91
SNRPA-201ENST00000243563 GAB4Q2WGN9 574 aa20.76■□□□□ 0.91
SNRPA-201ENST00000243563 KAZNQ674X7 775 aa20.76■□□□□ 0.91
SNRPA-201ENST00000243563 TFAP2DQ7Z6R9 452 aa20.76■□□□□ 0.91
SNRPA-201ENST00000243563 NLRP14Q86W24 1093 aa20.76■□□□□ 0.91
SNRPA-201ENST00000243563 TP53INP2Q8IXH6 220 aa20.76■□□□□ 0.91
SNRPA-201ENST00000243563 OR52K2Q8NGK3 314 aa20.76■□□□□ 0.91
SNRPA-201ENST00000243563 ZNF592Q92610 1267 aa20.76■□□□□ 0.91
SNRPA-201ENST00000243563 E2F7Q96AV8 911 aa20.76■□□□□ 0.91
SNRPA-201ENST00000243563 RBM41Q96IZ5 413 aaKnown RBP20.76■□□□□ 0.91
SNRPA-201ENST00000243563 RNF157Q96PX1 679 aa20.76■□□□□ 0.91
SNRPA-201ENST00000243563 SPHK2Q9NRA0 654 aa20.76■□□□□ 0.91
SNRPA-201ENST00000243563 TBC1D14Q9P2M4 693 aa20.76■□□□□ 0.91
SNRPA-201ENST00000243563 H3BRJ5 948 aa20.75■□□□□ 0.91
SNRPA-201ENST00000243563 DCLK1O15075 740 aa20.75■□□□□ 0.91
SNRPA-201ENST00000243563 TBL1XO60907 577 aa20.75■□□□□ 0.91
SNRPA-201ENST00000243563 ERCC2P18074 760 aa20.75■□□□□ 0.91
SNRPA-201ENST00000243563 HOXD9P28356 352 aaPredicted RBP20.75■□□□□ 0.91
SNRPA-201ENST00000243563 NUMBP49757 651 aa20.75■□□□□ 0.91
SNRPA-201ENST00000243563 DHCR24Q15392 516 aa20.75■□□□□ 0.91
SNRPA-201ENST00000243563 NAIF1Q69YI7 327 aaPredicted RBP20.75■□□□□ 0.91
SNRPA-201ENST00000243563 NPWQ8N729 165 aa20.75■□□□□ 0.91
SNRPA-201ENST00000243563 IRF7Q92985 503 aa20.75■□□□□ 0.91
SNRPA-201ENST00000243563 CHFRQ96EP1 664 aa20.75■□□□□ 0.91
SNRPA-201ENST00000243563 KLC2Q9H0B6 622 aa20.75■□□□□ 0.91
SNRPA-201ENST00000243563 CARD9Q9H257 536 aa20.75■□□□□ 0.91
SNRPA-201ENST00000243563 GTSE1Q9NYZ3 720 aa20.75■□□□□ 0.91
SNRPA-201ENST00000243563 PPARGC1AQ9UBK2 798 aaKnown RBP20.75■□□□□ 0.91
SNRPA-201ENST00000243563 NARSO43776 548 aaKnown RBP20.75■□□□□ 0.91
SNRPA-201ENST00000243563 CHKAP35790 457 aa20.75■□□□□ 0.91
SNRPA-201ENST00000243563 ARL4AP40617 200 aa20.75■□□□□ 0.91
SNRPA-201ENST00000243563 HCAR3P49019 387 aa20.75■□□□□ 0.91
SNRPA-201ENST00000243563 DYNLT1P63172 113 aa20.75■□□□□ 0.91
SNRPA-201ENST00000243563 MTA1Q13330 715 aa20.75■□□□□ 0.91
SNRPA-201ENST00000243563 C12orf40Q86WS4 652 aa20.75■□□□□ 0.91
SNRPA-201ENST00000243563 SLC44A3Q8N4M1 653 aa20.75■□□□□ 0.91
SNRPA-201ENST00000243563 DEPDC1BQ8WUY9 529 aa20.75■□□□□ 0.91
SNRPA-201ENST00000243563 TMA16Q96EY4 203 aaKnown RBP20.75■□□□□ 0.91
SNRPA-201ENST00000243563 TRMT61BQ9BVS5 477 aaKnown RBP20.75■□□□□ 0.91
SNRPA-201ENST00000243563 OSBPL8Q9BZF1 889 aa20.75■□□□□ 0.91
SNRPA-201ENST00000243563 ZYG11BQ9C0D3 744 aa20.75■□□□□ 0.91
SNRPA-201ENST00000243563 NEDD8-MDP1E9PL57 170 aa20.74■□□□□ 0.91
SNRPA-201ENST00000243563 SLC9A3R1O14745 358 aaPredicted RBP20.74■□□□□ 0.91
SNRPA-201ENST00000243563 CEP104O60308 925 aa20.74■□□□□ 0.91
SNRPA-201ENST00000243563 PENKP01210 267 aaPredicted RBP20.74■□□□□ 0.91
SNRPA-201ENST00000243563 TFDP3Q5H9I0 405 aa20.74■□□□□ 0.91
SNRPA-201ENST00000243563 IER5LQ5T953 404 aa20.74■□□□□ 0.91
SNRPA-201ENST00000243563 RNF43Q68DV7 783 aa20.74■□□□□ 0.91
SNRPA-201ENST00000243563 NCBP2-AS2Q69YL0 99 aa20.74■□□□□ 0.91
SNRPA-201ENST00000243563 ASTLQ6HA08 431 aaPredicted RBP20.74■□□□□ 0.91
SNRPA-201ENST00000243563 NPNTQ6UXI9 565 aa20.74■□□□□ 0.91
SNRPA-201ENST00000243563 LRRC31Q6UY01 552 aa20.74■□□□□ 0.91
SNRPA-201ENST00000243563 RFX6Q8HWS3 928 aa20.74■□□□□ 0.91
SNRPA-201ENST00000243563 ADHFE1Q8IWW8 467 aa20.74■□□□□ 0.91
SNRPA-201ENST00000243563 YAF2Q8IY57 180 aa20.74■□□□□ 0.91
SNRPA-201ENST00000243563 PLCD3Q8N3E9 789 aa20.74■□□□□ 0.91
SNRPA-201ENST00000243563 CCDC33Q8N5R6 958 aa20.74■□□□□ 0.91
SNRPA-201ENST00000243563 PLD5Q8N7P1 536 aa20.74■□□□□ 0.91
SNRPA-201ENST00000243563 KIAA1958Q8N8K9 716 aa20.74■□□□□ 0.91
SNRPA-201ENST00000243563 HJURPQ8NCD3 748 aaPredicted RBP20.74■□□□□ 0.91
SNRPA-201ENST00000243563 DDI1Q8WTU0 396 aa20.74■□□□□ 0.91
SNRPA-201ENST00000243563 OTUB2Q96DC9 234 aa20.74■□□□□ 0.91
SNRPA-201ENST00000243563 DDX50Q9BQ39 737 aaKnown RBP20.74■□□□□ 0.91
SNRPA-201ENST00000243563 NOL6Q9H6R4 1146 aaKnown RBP20.74■□□□□ 0.91
SNRPA-201ENST00000243563 THG1LQ9NWX6 298 aaKnown RBP20.74■□□□□ 0.91
SNRPA-201ENST00000243563 RCOR3Q9P2K3 495 aaPredicted RBP20.74■□□□□ 0.91
SNRPA-201ENST00000243563 SAE1Q9UBE0 346 aaPredicted RBP20.74■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms