RNA–Protein interactions for RNA: ENST00000243498.9

EXOSC9-201, Transcript of exosome component 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EXOSC9, Length 1,481 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC9-201ENST00000243498 CKMP06732 381 aa9.39□□□□□ -0.91
EXOSC9-201ENST00000243498 ITGAVP06756 1048 aa9.39□□□□□ -0.91
EXOSC9-201ENST00000243498 CD48P09326 243 aa9.39□□□□□ -0.91
EXOSC9-201ENST00000243498 RHOXF2BP0C7M4 288 aa9.39□□□□□ -0.91
EXOSC9-201ENST00000243498 CCNYL3P0C7X3 344 aa9.39□□□□□ -0.91
EXOSC9-201ENST00000243498 GOT1P17174 413 aa9.39□□□□□ -0.91
EXOSC9-201ENST00000243498 ERCC2P18074 760 aa9.39□□□□□ -0.91
EXOSC9-201ENST00000243498 AMPD1P23109 780 aa9.39□□□□□ -0.91
EXOSC9-201ENST00000243498 IL4RP24394 825 aa9.39□□□□□ -0.91
EXOSC9-201ENST00000243498 NRIP1P48552 1158 aa9.39□□□□□ -0.91
EXOSC9-201ENST00000243498 EIF3EP60228 445 aaKnown RBP9.39□□□□□ -0.91
EXOSC9-201ENST00000243498 DYNLT1P63172 113 aa9.39□□□□□ -0.91
EXOSC9-201ENST00000243498 OTUD4Q01804 1114 aaKnown RBP9.39□□□□□ -0.91
EXOSC9-201ENST00000243498 MLLT1Q03111 559 aaPredicted RBP9.39□□□□□ -0.91
EXOSC9-201ENST00000243498 PAFAH1B3Q15102 231 aaKnown RBP9.39□□□□□ -0.91
EXOSC9-201ENST00000243498 LLGL1Q15334 1064 aa9.39□□□□□ -0.91
EXOSC9-201ENST00000243498 PPP1R7Q15435 360 aa9.39□□□□□ -0.91
EXOSC9-201ENST00000243498 SIX1Q15475 284 aaPredicted RBP9.39□□□□□ -0.91
EXOSC9-201ENST00000243498 LRIT3Q3SXY7 679 aa9.39□□□□□ -0.91
EXOSC9-201ENST00000243498 MAP9Q49MG5 647 aa9.39□□□□□ -0.91
EXOSC9-201ENST00000243498 TREML4Q6UXN2 200 aa9.39□□□□□ -0.91
EXOSC9-201ENST00000243498 C4orf22Q6V702 233 aa9.39□□□□□ -0.91
EXOSC9-201ENST00000243498 TMC8Q8IU68 726 aa9.39□□□□□ -0.91
EXOSC9-201ENST00000243498 CDKL3Q8IVW4 592 aaPredicted RBP9.39□□□□□ -0.91
EXOSC9-201ENST00000243498 NOA1Q8NC60 698 aaKnown RBP9.39□□□□□ -0.91
EXOSC9-201ENST00000243498 PCDH19Q8TAB3 1148 aa9.39□□□□□ -0.91
EXOSC9-201ENST00000243498 ACTL9Q8TC94 416 aa9.39□□□□□ -0.91
EXOSC9-201ENST00000243498 GDPD5Q8WTR4 605 aa9.39□□□□□ -0.91
EXOSC9-201ENST00000243498 C1orf54Q8WWF1 131 aa9.39□□□□□ -0.91
EXOSC9-201ENST00000243498 RSAD2Q8WXG1 361 aa9.39□□□□□ -0.91
EXOSC9-201ENST00000243498 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP9.39□□□□□ -0.91
EXOSC9-201ENST00000243498 SLCO2A1Q92959 643 aa9.39□□□□□ -0.91
EXOSC9-201ENST00000243498 NKD2Q969F2 451 aaPredicted RBP9.39□□□□□ -0.91
EXOSC9-201ENST00000243498 RHOXF2Q9BQY4 288 aa9.39□□□□□ -0.91
EXOSC9-201ENST00000243498 LRRC1Q9BTT6 524 aa9.39□□□□□ -0.91
EXOSC9-201ENST00000243498 LRRC3Q9BY71 257 aa9.39□□□□□ -0.91
EXOSC9-201ENST00000243498 TASP1Q9H6P5 420 aa9.39□□□□□ -0.91
EXOSC9-201ENST00000243498 FAM114A2Q9NRY5 505 aa9.39□□□□□ -0.91
EXOSC9-201ENST00000243498 MTMR10Q9NXD2 777 aa9.39□□□□□ -0.91
EXOSC9-201ENST00000243498 PPARGC1AQ9UBK2 798 aaKnown RBP9.39□□□□□ -0.91
EXOSC9-201ENST00000243498 AMACRQ9UHK6 382 aa9.39□□□□□ -0.91
EXOSC9-201ENST00000243498 SH3BP1Q9Y3L3 701 aa9.39□□□□□ -0.91
EXOSC9-201ENST00000243498 DNAH12Q6ZR08 3092 aa9.39□□□□□ -0.91
EXOSC9-201ENST00000243498 A0A1W2PRU2 124 aa9.38□□□□□ -0.91
EXOSC9-201ENST00000243498 H7C0C1 242 aa9.38□□□□□ -0.91
EXOSC9-201ENST00000243498 MTSS1O43312 755 aa9.38□□□□□ -0.91
EXOSC9-201ENST00000243498 LIASO43766 372 aa9.38□□□□□ -0.91
EXOSC9-201ENST00000243498 STK10O94804 968 aaKnown RBP9.38□□□□□ -0.91
EXOSC9-201ENST00000243498 LRIG2O94898 1065 aa9.38□□□□□ -0.91
EXOSC9-201ENST00000243498 TBX18O95935 607 aa9.38□□□□□ -0.91
EXOSC9-201ENST00000243498 RHOP08100 348 aa9.38□□□□□ -0.91
EXOSC9-201ENST00000243498 HMBSP08397 361 aa9.38□□□□□ -0.91
EXOSC9-201ENST00000243498 RBP3P10745 1247 aa9.38□□□□□ -0.91
EXOSC9-201ENST00000243498 HOXB8P17481 243 aaPredicted RBP9.38□□□□□ -0.91
EXOSC9-201ENST00000243498 AVPR1AP37288 418 aa9.38□□□□□ -0.91
EXOSC9-201ENST00000243498 ATP5OP48047 213 aa9.38□□□□□ -0.91
EXOSC9-201ENST00000243498 PGFP49763 221 aa9.38□□□□□ -0.91
EXOSC9-201ENST00000243498 DRG2P55039 364 aaKnown RBP9.38□□□□□ -0.91
EXOSC9-201ENST00000243498 VCPP55072 806 aaKnown RBP9.38□□□□□ -0.91
EXOSC9-201ENST00000243498 SLC7A9P82251 487 aa9.38□□□□□ -0.91
EXOSC9-201ENST00000243498 SEMA3BQ13214 749 aa9.38□□□□□ -0.91
EXOSC9-201ENST00000243498 SNX1Q13596 522 aa9.38□□□□□ -0.91
EXOSC9-201ENST00000243498 PDK1Q15118 436 aa9.38□□□□□ -0.91
EXOSC9-201ENST00000243498 NOMO1Q15155 1222 aa9.38□□□□□ -0.91
EXOSC9-201ENST00000243498 PTPRNQ16849 979 aa9.38□□□□□ -0.91
EXOSC9-201ENST00000243498 RABGAP1LQ5R372 815 aa9.38□□□□□ -0.91
EXOSC9-201ENST00000243498 RWDD4Q6NW29 188 aaKnown RBP9.38□□□□□ -0.91
EXOSC9-201ENST00000243498 WDR93Q6P2C0 686 aa9.38□□□□□ -0.91
EXOSC9-201ENST00000243498 DARS2Q6PI48 645 aaKnown RBP9.38□□□□□ -0.91
EXOSC9-201ENST00000243498 TMEM184AQ6ZMB5 413 aa9.38□□□□□ -0.91
EXOSC9-201ENST00000243498 CHSY1Q86X52 802 aa9.38□□□□□ -0.91
EXOSC9-201ENST00000243498 LRRC49Q8IUZ0 686 aa9.38□□□□□ -0.91
EXOSC9-201ENST00000243498 CCDC117Q8IWD4 279 aaPredicted RBP9.38□□□□□ -0.91
EXOSC9-201ENST00000243498 PYROXD2Q8N2H3 581 aa9.38□□□□□ -0.91
EXOSC9-201ENST00000243498 PLD5Q8N7P1 536 aa9.38□□□□□ -0.91
EXOSC9-201ENST00000243498 EIF1ADQ8N9N8 165 aaKnown RBP9.38□□□□□ -0.91
EXOSC9-201ENST00000243498 SLC35B2Q8TB61 432 aa9.38□□□□□ -0.91
EXOSC9-201ENST00000243498 SMG7Q92540 1137 aaKnown RBP9.38□□□□□ -0.91
EXOSC9-201ENST00000243498 LRRC45Q96CN5 670 aa9.38□□□□□ -0.91
EXOSC9-201ENST00000243498 KLF16Q9BXK1 252 aaPredicted RBP9.38□□□□□ -0.91
EXOSC9-201ENST00000243498 FAM129AQ9BZQ8 928 aa9.38□□□□□ -0.91
EXOSC9-201ENST00000243498 ZYG11BQ9C0D3 744 aa9.38□□□□□ -0.91
EXOSC9-201ENST00000243498 ZNF576Q9H609 170 aa9.38□□□□□ -0.91
EXOSC9-201ENST00000243498 ZNF334Q9HCZ1 680 aaPredicted RBP9.38□□□□□ -0.91
EXOSC9-201ENST00000243498 ATP13A2Q9NQ11 1180 aa9.38□□□□□ -0.91
EXOSC9-201ENST00000243498 ARHGEF4Q9NR80 690 aa9.38□□□□□ -0.91
EXOSC9-201ENST00000243498 DNMT3BQ9UBC3 853 aaKnown RBP9.38□□□□□ -0.91
EXOSC9-201ENST00000243498 HEY1Q9Y5J3 304 aa9.38□□□□□ -0.91
EXOSC9-201ENST00000243498 HS3ST4Q9Y661 456 aa9.38□□□□□ -0.91
EXOSC9-201ENST00000243498 BRCA2P51587 3418 aa9.38□□□□□ -0.91
EXOSC9-201ENST00000243498 TCRBV7S2A1N4TA0A589 114 aa9.37□□□□□ -0.91
EXOSC9-201ENST00000243498 C2orf78A6NCI8 922 aa9.37□□□□□ -0.91
EXOSC9-201ENST00000243498 WASH4PA8MWX3 477 aa9.37□□□□□ -0.91
EXOSC9-201ENST00000243498 E9PAM4 449 aa9.37□□□□□ -0.91
EXOSC9-201ENST00000243498 SGK1O00141 431 aa9.37□□□□□ -0.91
EXOSC9-201ENST00000243498 RAD51CO43502 376 aa9.37□□□□□ -0.91
EXOSC9-201ENST00000243498 RFPL2O75678 378 aa9.37□□□□□ -0.91
EXOSC9-201ENST00000243498 HEXIM1O94992 359 aaKnown RBP9.37□□□□□ -0.91
EXOSC9-201ENST00000243498 PAPLNO95428 1278 aa9.37□□□□□ -0.91
EXOSC9-201ENST00000243498 RHOQP17081 205 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms