RNA–Protein interactions for RNA: ENST00000243082.4

HOXC11-201, Transcript of homeobox C11, humanhuman

TSL 3 BASIC

Gene HOXC11, Length 2,039 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC11-201ENST00000243082 FAM155BO75949 473 aa18.99■□□□□ 0.63
HOXC11-201ENST00000243082 KIAA0754O94854 1291 aa18.99■□□□□ 0.63
HOXC11-201ENST00000243082 MX2P20592 715 aa18.99■□□□□ 0.63
HOXC11-201ENST00000243082 SERPINB6P35237 376 aa18.99■□□□□ 0.63
HOXC11-201ENST00000243082 GARSP41250 739 aaKnown RBP18.99■□□□□ 0.63
HOXC11-201ENST00000243082 SF3A3Q12874 501 aaKnown RBP eCLIP18.99■□□□□ 0.63
HOXC11-201ENST00000243082 SPARCL1Q14515 664 aa18.99■□□□□ 0.63
HOXC11-201ENST00000243082 CTXN3Q4LDR2 81 aa18.99■□□□□ 0.63
HOXC11-201ENST00000243082 FAM171A1Q5VUB5 890 aa18.99■□□□□ 0.63
HOXC11-201ENST00000243082 TRMT10BQ6PF06 316 aaKnown RBP18.99■□□□□ 0.63
HOXC11-201ENST00000243082 SH2D5Q6ZV89 423 aa18.99■□□□□ 0.63
HOXC11-201ENST00000243082 CEP57Q86XR8 500 aa18.99■□□□□ 0.63
HOXC11-201ENST00000243082 NUP93Q8N1F7 819 aa18.99■□□□□ 0.63
HOXC11-201ENST00000243082 CRIPAKQ8N1N5 446 aa18.99■□□□□ 0.63
HOXC11-201ENST00000243082 PPM1NQ8N819 430 aa18.99■□□□□ 0.63
HOXC11-201ENST00000243082 SIK2Q9H0K1 926 aa18.99■□□□□ 0.63
HOXC11-201ENST00000243082 MARCH5Q9NX47 278 aa18.99■□□□□ 0.63
HOXC11-201ENST00000243082 KLHL8Q9P2G9 620 aaPredicted RBP18.99■□□□□ 0.63
HOXC11-201ENST00000243082 HCSTQ9UBK5 93 aa18.99■□□□□ 0.63
HOXC11-201ENST00000243082 NUDT5Q9UKK9 219 aa18.99■□□□□ 0.63
HOXC11-201ENST00000243082 SCML2Q9UQR0 700 aa18.99■□□□□ 0.63
HOXC11-201ENST00000243082 TRIM17Q9Y577 477 aa18.99■□□□□ 0.63
HOXC11-201ENST00000243082 PITPNM1O00562 1244 aa18.98■□□□□ 0.63
HOXC11-201ENST00000243082 TRIM66O15016 1216 aa18.98■□□□□ 0.63
HOXC11-201ENST00000243082 PAGE1O75459 146 aa18.98■□□□□ 0.63
HOXC11-201ENST00000243082 OAS1P00973 400 aaKnown RBP18.98■□□□□ 0.63
HOXC11-201ENST00000243082 SRGAP2BP0DMP2 458 aa18.98■□□□□ 0.63
HOXC11-201ENST00000243082 CCR1P32246 355 aa18.98■□□□□ 0.63
HOXC11-201ENST00000243082 CTAGE3PQ8IX95 158 aa18.98■□□□□ 0.63
HOXC11-201ENST00000243082 SEPT8Q92599 483 aa18.98■□□□□ 0.63
HOXC11-201ENST00000243082 DPF3Q92784 378 aa18.98■□□□□ 0.63
HOXC11-201ENST00000243082 ALKBH8Q96BT7 664 aaKnown RBP18.98■□□□□ 0.63
HOXC11-201ENST00000243082 SERAC1Q96JX3 654 aa18.98■□□□□ 0.63
HOXC11-201ENST00000243082 B3GALT6Q96L58 329 aa18.98■□□□□ 0.63
HOXC11-201ENST00000243082 PGLYRP2Q96PD5 576 aa18.98■□□□□ 0.63
HOXC11-201ENST00000243082 KLF6Q99612 283 aaPredicted RBP18.98■□□□□ 0.63
HOXC11-201ENST00000243082 ZNF180Q9UJW8 692 aa18.98■□□□□ 0.63
HOXC11-201ENST00000243082 PCDHB5Q9Y5E4 795 aa18.98■□□□□ 0.63
HOXC11-201ENST00000243082 TET1Q8NFU7 2136 aa18.98■□□□□ 0.63
HOXC11-201ENST00000243082 WDR27A2RRH5 827 aa18.98■□□□□ 0.63
HOXC11-201ENST00000243082 SDR42E2A6NKP2 422 aa18.98■□□□□ 0.63
HOXC11-201ENST00000243082 FAM159BA6NKW6 160 aa18.98■□□□□ 0.63
HOXC11-201ENST00000243082 GOLGA8RI6L899 631 aa18.98■□□□□ 0.63
HOXC11-201ENST00000243082 MT-ND3P03897 115 aa18.98■□□□□ 0.63
HOXC11-201ENST00000243082 ALDH2P05091 517 aa18.98■□□□□ 0.63
HOXC11-201ENST00000243082 GBP2P32456 591 aaPredicted RBP18.98■□□□□ 0.63
HOXC11-201ENST00000243082 MAGEA11P43364 429 aa18.98■□□□□ 0.63
HOXC11-201ENST00000243082 SLC11A1P49279 550 aa18.98■□□□□ 0.63
HOXC11-201ENST00000243082 ITIH4Q14624 930 aa18.98■□□□□ 0.63
HOXC11-201ENST00000243082 STEAP4Q687X5 459 aa18.98■□□□□ 0.63
HOXC11-201ENST00000243082 MON1AQ86VX9 555 aa18.98■□□□□ 0.63
HOXC11-201ENST00000243082 OTUD6BQ8N6M0 293 aa18.98■□□□□ 0.63
HOXC11-201ENST00000243082 TTC9BQ8N6N2 239 aa18.98■□□□□ 0.63
HOXC11-201ENST00000243082 ATAD1Q8NBU5 361 aa18.98■□□□□ 0.63
HOXC11-201ENST00000243082 ZSCAN18Q8TBC5 510 aaPredicted RBP18.98■□□□□ 0.63
HOXC11-201ENST00000243082 ARNTL2Q8WYA1 636 aa18.98■□□□□ 0.63
HOXC11-201ENST00000243082 STAMBPL1Q96FJ0 436 aa18.98■□□□□ 0.63
HOXC11-201ENST00000243082 PIH1D1Q9NWS0 290 aaKnown RBP18.98■□□□□ 0.63
HOXC11-201ENST00000243082 MOCS1Q9NZB8 636 aa18.98■□□□□ 0.63
HOXC11-201ENST00000243082 ZBTB24O43167 697 aaPredicted RBP18.97■□□□□ 0.63
HOXC11-201ENST00000243082 ZWINTO95229 277 aa18.97■□□□□ 0.63
HOXC11-201ENST00000243082 FGFR3P22607 806 aa18.97■□□□□ 0.63
HOXC11-201ENST00000243082 HOXC13P31276 330 aa18.97■□□□□ 0.63
HOXC11-201ENST00000243082 CD68P34810 354 aaPredicted RBP18.97■□□□□ 0.63
HOXC11-201ENST00000243082 USP46P62068 366 aa18.97■□□□□ 0.63
HOXC11-201ENST00000243082 CRADDP78560 199 aa18.97■□□□□ 0.63
HOXC11-201ENST00000243082 ZBTB17Q13105 803 aa18.97■□□□□ 0.63
HOXC11-201ENST00000243082 PPP2R5DQ14738 602 aa18.97■□□□□ 0.63
HOXC11-201ENST00000243082 RNF187Q5TA31 235 aaPredicted RBP18.97■□□□□ 0.63
HOXC11-201ENST00000243082 MANEALQ5VSG8 457 aa18.97■□□□□ 0.63
HOXC11-201ENST00000243082 RWDD4Q6NW29 188 aaKnown RBP18.97■□□□□ 0.63
HOXC11-201ENST00000243082 CYS1Q717R9 158 aa18.97■□□□□ 0.63
HOXC11-201ENST00000243082 OXNAD1Q96HP4 312 aaPredicted RBP18.97■□□□□ 0.63
HOXC11-201ENST00000243082 CELF6Q96J87 481 aaKnown RBP18.97■□□□□ 0.63
HOXC11-201ENST00000243082 NUP205Q92621 2012 aa18.97■□□□□ 0.63
HOXC11-201ENST00000243082 GOLGA6L7A0A1B0GV03 622 aa18.96■□□□□ 0.63
HOXC11-201ENST00000243082 OR6C75A6NL08 312 aa18.96■□□□□ 0.63
HOXC11-201ENST00000243082 KCNU1A8MYU2 1149 aa18.96■□□□□ 0.63
HOXC11-201ENST00000243082 MTSS1O43312 755 aa18.96■□□□□ 0.63
HOXC11-201ENST00000243082 UGT1A9O60656 530 aa18.96■□□□□ 0.63
HOXC11-201ENST00000243082 CSH1P0DML2 217 aa18.96■□□□□ 0.63
HOXC11-201ENST00000243082 CSH2P0DML3 217 aa18.96■□□□□ 0.63
HOXC11-201ENST00000243082 MGAT1P26572 445 aa18.96■□□□□ 0.63
HOXC11-201ENST00000243082 SESN2P58004 480 aaPredicted RBP18.96■□□□□ 0.63
HOXC11-201ENST00000243082 HTRA3P83110 453 aa18.96■□□□□ 0.63
HOXC11-201ENST00000243082 SLC18A2Q05940 514 aa18.96■□□□□ 0.63
HOXC11-201ENST00000243082 TEX44Q53QW1 395 aa18.96■□□□□ 0.63
HOXC11-201ENST00000243082 TTC39BQ5VTQ0 682 aaPredicted RBP18.96■□□□□ 0.63
HOXC11-201ENST00000243082 LVRNQ6Q4G3 990 aa18.96■□□□□ 0.63
HOXC11-201ENST00000243082 RGS9BPQ6ZS82 235 aa18.96■□□□□ 0.63
HOXC11-201ENST00000243082 ANKS4BQ8N8V4 417 aa18.96■□□□□ 0.63
HOXC11-201ENST00000243082 TCP10LQ8TDR4 215 aa18.96■□□□□ 0.63
HOXC11-201ENST00000243082 FCRL2Q96LA5 508 aaPredicted RBP18.96■□□□□ 0.63
HOXC11-201ENST00000243082 FBXO44Q9H4M3 255 aa18.96■□□□□ 0.63
HOXC11-201ENST00000243082 UGT1A7Q9HAW7 530 aa18.96■□□□□ 0.63
HOXC11-201ENST00000243082 UGT1A10Q9HAW8 530 aa18.96■□□□□ 0.63
HOXC11-201ENST00000243082 UGT1A8Q9HAW9 530 aa18.96■□□□□ 0.63
HOXC11-201ENST00000243082 IL37Q9NZH6 218 aa18.96■□□□□ 0.63
HOXC11-201ENST00000243082 LRFN2Q9ULH4 789 aa18.96■□□□□ 0.63
HOXC11-201ENST00000243082 MYO16Q9Y6X6 1858 aa18.96■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms