RNA–Protein interactions for RNA: ENST00000238688.9

SLIRP-201, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SLIRP, Length 394 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-201ENST00000238688 CSPG4P5Q96PW8 444 aa13.63□□□□□ -0.23
SLIRP-201ENST00000238688 SH3GL2Q99962 352 aa13.63□□□□□ -0.23
SLIRP-201ENST00000238688 TTLL2Q9BWV7 592 aa13.63□□□□□ -0.23
SLIRP-201ENST00000238688 DPH5Q9H2P9 285 aa13.63□□□□□ -0.23
SLIRP-201ENST00000238688 PABPC3Q9H361 631 aaKnown RBP13.63□□□□□ -0.23
SLIRP-201ENST00000238688 PPCSQ9HAB8 311 aa13.63□□□□□ -0.23
SLIRP-201ENST00000238688 KCNK12Q9HB15 430 aa13.63□□□□□ -0.23
SLIRP-201ENST00000238688 TLR8Q9NR97 1041 aaKnown RBP13.63□□□□□ -0.23
SLIRP-201ENST00000238688 DDIT4Q9NX09 232 aa13.63□□□□□ -0.23
SLIRP-201ENST00000238688 ZDHHC7Q9NXF8 308 aa13.63□□□□□ -0.23
SLIRP-201ENST00000238688 PAK5Q9P286 719 aa13.63□□□□□ -0.23
SLIRP-201ENST00000238688 AFF4Q9UHB7 1163 aaKnown RBP13.63□□□□□ -0.23
SLIRP-201ENST00000238688 SNX24Q9Y343 169 aa13.63□□□□□ -0.23
SLIRP-201ENST00000238688 MTMR11A4FU01 709 aa13.62□□□□□ -0.23
SLIRP-201ENST00000238688 GOLGA6L10A6NI86 522 aa13.62□□□□□ -0.23
SLIRP-201ENST00000238688 SPDYE4A6NLX3 237 aa13.62□□□□□ -0.23
SLIRP-201ENST00000238688 A6NNZ2 444 aa13.62□□□□□ -0.23
SLIRP-201ENST00000238688 GOLGA8KD6RF30 607 aa13.62□□□□□ -0.23
SLIRP-201ENST00000238688 SGK1O00141 431 aa13.62□□□□□ -0.23
SLIRP-201ENST00000238688 DNALI1O14645 258 aaPredicted RBP13.62□□□□□ -0.23
SLIRP-201ENST00000238688 PPP1R12AO14974 1030 aaPredicted RBP13.62□□□□□ -0.23
SLIRP-201ENST00000238688 FGF10O15520 208 aaPredicted RBP13.62□□□□□ -0.23
SLIRP-201ENST00000238688 IRAK2O43187 625 aa13.62□□□□□ -0.23
SLIRP-201ENST00000238688 STK10O94804 968 aaKnown RBP13.62□□□□□ -0.23
SLIRP-201ENST00000238688 HAPLN1P10915 354 aaPredicted RBP13.62□□□□□ -0.23
SLIRP-201ENST00000238688 TSHRP16473 764 aa13.62□□□□□ -0.23
SLIRP-201ENST00000238688 MX2P20592 715 aa13.62□□□□□ -0.23
SLIRP-201ENST00000238688 YWHAQP27348 245 aa13.62□□□□□ -0.23
SLIRP-201ENST00000238688 CCR1P32246 355 aa13.62□□□□□ -0.23
SLIRP-201ENST00000238688 CACNA2D1P54289 1103 aa13.62□□□□□ -0.23
SLIRP-201ENST00000238688 DHX9Q08211 1270 aaKnown RBP13.62□□□□□ -0.23
SLIRP-201ENST00000238688 ADCY2Q08462 1091 aa13.62□□□□□ -0.23
SLIRP-201ENST00000238688 SNX1Q13596 522 aa13.62□□□□□ -0.23
SLIRP-201ENST00000238688 RAB33AQ14088 237 aa13.62□□□□□ -0.23
SLIRP-201ENST00000238688 PAFAH1B3Q15102 231 aaKnown RBP13.62□□□□□ -0.23
SLIRP-201ENST00000238688 PDK1Q15118 436 aa13.62□□□□□ -0.23
SLIRP-201ENST00000238688 CCDC142Q17RM4 750 aa13.62□□□□□ -0.23
SLIRP-201ENST00000238688 TUBB8Q3ZCM7 444 aa13.62□□□□□ -0.23
SLIRP-201ENST00000238688 SYPL2Q5VXT5 272 aa13.62□□□□□ -0.23
SLIRP-201ENST00000238688 HIBCHQ6NVY1 386 aaPredicted RBP13.62□□□□□ -0.23
SLIRP-201ENST00000238688 RTL10Q7L3V2 364 aa13.62□□□□□ -0.23
SLIRP-201ENST00000238688 ZCCHC9Q8N567 271 aaKnown RBP13.62□□□□□ -0.23
SLIRP-201ENST00000238688 LZTR1Q8N653 840 aa13.62□□□□□ -0.23
SLIRP-201ENST00000238688 PQLC3Q8N755 202 aa13.62□□□□□ -0.23
SLIRP-201ENST00000238688 PCDH19Q8TAB3 1148 aa13.62□□□□□ -0.23
SLIRP-201ENST00000238688 ACSF2Q96CM8 615 aaPredicted RBP13.62□□□□□ -0.23
SLIRP-201ENST00000238688 TTC25Q96NG3 672 aa13.62□□□□□ -0.23
SLIRP-201ENST00000238688 TMEM209Q96SK2 561 aa13.62□□□□□ -0.23
SLIRP-201ENST00000238688 PHOX2BQ99453 314 aa13.62□□□□□ -0.23
SLIRP-201ENST00000238688 WDCPQ9H6R7 721 aa13.62□□□□□ -0.23
SLIRP-201ENST00000238688 PIGVQ9NUD9 493 aa13.62□□□□□ -0.23
SLIRP-201ENST00000238688 ARHGEF38Q9NXL2 777 aa13.62□□□□□ -0.23
SLIRP-201ENST00000238688 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.62□□□□□ -0.23
SLIRP-201ENST00000238688 EPS15L1Q9UBC2 864 aa13.62□□□□□ -0.23
SLIRP-201ENST00000238688 DPP7Q9UHL4 492 aa13.62□□□□□ -0.23
SLIRP-201ENST00000238688 ANAPC5Q9UJX4 755 aa13.62□□□□□ -0.23
SLIRP-201ENST00000238688 TPX2Q9ULW0 747 aaKnown RBP13.62□□□□□ -0.23
SLIRP-201ENST00000238688 NAALADL1Q9UQQ1 740 aa13.62□□□□□ -0.23
SLIRP-201ENST00000238688 NARSO43776 548 aaKnown RBP13.61□□□□□ -0.23
SLIRP-201ENST00000238688 CD48P09326 243 aa13.61□□□□□ -0.23
SLIRP-201ENST00000238688 OR1D2P34982 312 aa13.61□□□□□ -0.23
SLIRP-201ENST00000238688 NTHL1P78549 312 aa13.61□□□□□ -0.23
SLIRP-201ENST00000238688 MRPS25P82663 173 aaKnown RBP13.61□□□□□ -0.23
SLIRP-201ENST00000238688 RING1Q06587 406 aa13.61□□□□□ -0.23
SLIRP-201ENST00000238688 DPYSQ14117 519 aa13.61□□□□□ -0.23
SLIRP-201ENST00000238688 SLC45A4Q5BKX6 768 aa13.61□□□□□ -0.23
SLIRP-201ENST00000238688 PPP6R3Q5H9R7 873 aaPredicted RBP13.61□□□□□ -0.23
SLIRP-201ENST00000238688 SNX30Q5VWJ9 437 aa13.61□□□□□ -0.23
SLIRP-201ENST00000238688 KLHDC10Q6PID8 442 aa13.61□□□□□ -0.23
SLIRP-201ENST00000238688 FAM131BQ86XD5 332 aa13.61□□□□□ -0.23
SLIRP-201ENST00000238688 SCN4BQ8IWT1 228 aa13.61□□□□□ -0.23
SLIRP-201ENST00000238688 SUGP1Q8IWZ8 645 aaKnown RBP13.61□□□□□ -0.23
SLIRP-201ENST00000238688 PPIL6Q8IXY8 311 aa13.61□□□□□ -0.23
SLIRP-201ENST00000238688 GSPT2Q8IYD1 628 aaKnown RBP13.61□□□□□ -0.23
SLIRP-201ENST00000238688 CCDC185Q8N715 623 aa13.61□□□□□ -0.23
SLIRP-201ENST00000238688 ZNF461Q8TAF7 563 aa13.61□□□□□ -0.23
SLIRP-201ENST00000238688 DQX1Q8TE96 717 aaKnown RBP13.61□□□□□ -0.23
SLIRP-201ENST00000238688 C1orf74Q96LT6 269 aa13.61□□□□□ -0.23
SLIRP-201ENST00000238688 KCTD15Q96SI1 283 aaPredicted RBP13.61□□□□□ -0.23
SLIRP-201ENST00000238688 TMEM109Q9BVC6 243 aa13.61□□□□□ -0.23
SLIRP-201ENST00000238688 TRIM31Q9BZY9 425 aa13.61□□□□□ -0.23
SLIRP-201ENST00000238688 ARHGEF4Q9NR80 690 aa13.61□□□□□ -0.23
SLIRP-201ENST00000238688 CWC15Q9P013 229 aaKnown RBP13.61□□□□□ -0.23
SLIRP-201ENST00000238688 SLC12A6Q9UHW9 1150 aa13.61□□□□□ -0.23
SLIRP-201ENST00000238688 TLR6Q9Y2C9 796 aa13.61□□□□□ -0.23
SLIRP-201ENST00000238688 DOCK4Q8N1I0 1966 aa13.6□□□□□ -0.23
SLIRP-201ENST00000238688 EEF2KO00418 725 aaKnown RBP13.6□□□□□ -0.23
SLIRP-201ENST00000238688 CHADO15335 359 aa13.6□□□□□ -0.23
SLIRP-201ENST00000238688 ABLIM3O94929 683 aa13.6□□□□□ -0.23
SLIRP-201ENST00000238688 C8AP07357 584 aa13.6□□□□□ -0.23
SLIRP-201ENST00000238688 ABHD2P08910 425 aa13.6□□□□□ -0.23
SLIRP-201ENST00000238688 FAM153BP0C7A2 387 aa13.6□□□□□ -0.23
SLIRP-201ENST00000238688 CSH1P0DML2 217 aa13.6□□□□□ -0.23
SLIRP-201ENST00000238688 CSH2P0DML3 217 aa13.6□□□□□ -0.23
SLIRP-201ENST00000238688 LAMP2P13473 410 aa13.6□□□□□ -0.23
SLIRP-201ENST00000238688 HOXC13P31276 330 aa13.6□□□□□ -0.23
SLIRP-201ENST00000238688 HSD17B3P37058 310 aa13.6□□□□□ -0.23
SLIRP-201ENST00000238688 MAGEA6P43360 314 aa13.6□□□□□ -0.23
SLIRP-201ENST00000238688 TUBP50607 506 aa13.6□□□□□ -0.23
SLIRP-201ENST00000238688 PMS2P54278 862 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms