RNA–Protein interactions for RNA: ENST00000233575.6

SNX17-201, Transcript of sorting nexin 17, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX17, Length 2,044 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-201ENST00000233575 MSRAQ9UJ68 235 aa19.15■□□□□ 0.66
SNX17-201ENST00000233575 SZT2Q5T011 3432 aa19.14■□□□□ 0.66
SNX17-201ENST00000233575 BCLAF3A2AJT9 711 aaKnown RBP19.14■□□□□ 0.65
SNX17-201ENST00000233575 MBL2P11226 248 aaPredicted RBP19.14■□□□□ 0.65
SNX17-201ENST00000233575 RPL22P35268 128 aaKnown RBP19.14■□□□□ 0.65
SNX17-201ENST00000233575 KPNA1P52294 538 aaPredicted RBP19.14■□□□□ 0.65
SNX17-201ENST00000233575 XRCC4Q13426 336 aa19.14■□□□□ 0.65
SNX17-201ENST00000233575 PABPC1LQ4VXU2 614 aaKnown RBP19.14■□□□□ 0.65
SNX17-201ENST00000233575 FBXL22Q6P050 247 aa19.14■□□□□ 0.65
SNX17-201ENST00000233575 DENND1CQ8IV53 801 aa19.14■□□□□ 0.65
SNX17-201ENST00000233575 ELMOD1Q8N336 334 aa19.14■□□□□ 0.65
SNX17-201ENST00000233575 ART4Q93070 314 aa19.14■□□□□ 0.65
SNX17-201ENST00000233575 ZBTB9Q96C00 473 aa19.14■□□□□ 0.65
SNX17-201ENST00000233575 ADAM7Q9H2U9 754 aa19.14■□□□□ 0.65
SNX17-201ENST00000233575 ATXN3LQ9H3M9 355 aa19.14■□□□□ 0.65
SNX17-201ENST00000233575 PRDM16Q9HAZ2 1276 aa19.14■□□□□ 0.65
SNX17-201ENST00000233575 DOCK4Q8N1I0 1966 aa19.14■□□□□ 0.65
SNX17-201ENST00000233575 SASH3O75995 380 aa19.13■□□□□ 0.65
SNX17-201ENST00000233575 CNTN5O94779 1100 aa19.13■□□□□ 0.65
SNX17-201ENST00000233575 OLFM2O95897 454 aa19.13■□□□□ 0.65
SNX17-201ENST00000233575 TNNT3P45378 269 aaPredicted RBP19.13■□□□□ 0.65
SNX17-201ENST00000233575 ITGA8P53708 1063 aa19.13■□□□□ 0.65
SNX17-201ENST00000233575 ALFQ53S48 1182 aa19.13■□□□□ 0.65
SNX17-201ENST00000233575 CIR1Q86X95 450 aaPredicted RBP19.13■□□□□ 0.65
SNX17-201ENST00000233575 MAB21L3Q8N8X9 362 aa19.13■□□□□ 0.65
SNX17-201ENST00000233575 EIF1ADQ8N9N8 165 aaKnown RBP19.13■□□□□ 0.65
SNX17-201ENST00000233575 DEPDC1BQ8WUY9 529 aa19.13■□□□□ 0.65
SNX17-201ENST00000233575 SLC28A3Q9HAS3 691 aa19.13■□□□□ 0.65
SNX17-201ENST00000233575 ASAH2Q9NR71 780 aa19.13■□□□□ 0.65
SNX17-201ENST00000233575 TMEM51Q9NW97 253 aa19.13■□□□□ 0.65
SNX17-201ENST00000233575 WHRNQ9P202 907 aa19.13■□□□□ 0.65
SNX17-201ENST00000233575 HDCP19113 662 aa19.13■□□□□ 0.65
SNX17-201ENST00000233575 SLC6A4P31645 630 aa19.13■□□□□ 0.65
SNX17-201ENST00000233575 STIP1P31948 543 aaKnown RBP19.13■□□□□ 0.65
SNX17-201ENST00000233575 COG7P83436 770 aa19.13■□□□□ 0.65
SNX17-201ENST00000233575 FAM133BQ5BKY9 247 aaKnown RBP19.13■□□□□ 0.65
SNX17-201ENST00000233575 IZUMO3Q5VZ72 239 aa19.13■□□□□ 0.65
SNX17-201ENST00000233575 EMBQ6PCB8 327 aa19.13■□□□□ 0.65
SNX17-201ENST00000233575 RFWD3Q6PCD5 774 aa19.13■□□□□ 0.65
SNX17-201ENST00000233575 CHSY1Q86X52 802 aa19.13■□□□□ 0.65
SNX17-201ENST00000233575 CDKL3Q8IVW4 592 aaPredicted RBP19.13■□□□□ 0.65
SNX17-201ENST00000233575 ADAMTS19Q8TE59 1207 aa19.13■□□□□ 0.65
SNX17-201ENST00000233575 TFB1MQ8WVM0 346 aaKnown RBP19.13■□□□□ 0.65
SNX17-201ENST00000233575 TCEAL4Q96EI5 215 aa19.13■□□□□ 0.65
SNX17-201ENST00000233575 FUT8Q9BYC5 575 aa19.13■□□□□ 0.65
SNX17-201ENST00000233575 DNMT3BQ9UBC3 853 aaKnown RBP19.13■□□□□ 0.65
SNX17-201ENST00000233575 NOTCH4Q99466 2003 aa19.13■□□□□ 0.65
SNX17-201ENST00000233575 CORO1AP31146 461 aaKnown RBP19.12■□□□□ 0.65
SNX17-201ENST00000233575 HARS2P49590 506 aaKnown RBP19.12■□□□□ 0.65
SNX17-201ENST00000233575 NTHL1P78549 312 aa19.12■□□□□ 0.65
SNX17-201ENST00000233575 AP1B1Q10567 949 aa19.12■□□□□ 0.65
SNX17-201ENST00000233575 CALCOCO2Q13137 446 aa19.12■□□□□ 0.65
SNX17-201ENST00000233575 PRKD1Q15139 912 aaPredicted RBP19.12■□□□□ 0.65
SNX17-201ENST00000233575 RAB30Q15771 203 aa19.12■□□□□ 0.65
SNX17-201ENST00000233575 PDE12Q6L8Q7 609 aaKnown RBP19.12■□□□□ 0.65
SNX17-201ENST00000233575 TFAP2DQ7Z6R9 452 aa19.12■□□□□ 0.65
SNX17-201ENST00000233575 NLRP14Q86W24 1093 aa19.12■□□□□ 0.65
SNX17-201ENST00000233575 CCNYQ8ND76 341 aa19.12■□□□□ 0.65
SNX17-201ENST00000233575 CCDC110Q8TBZ0 833 aa19.12■□□□□ 0.65
SNX17-201ENST00000233575 MRPS31Q92665 395 aaKnown RBP19.12■□□□□ 0.65
SNX17-201ENST00000233575 CAVIN3Q969G5 261 aa19.12■□□□□ 0.65
SNX17-201ENST00000233575 PLD4Q96BZ4 506 aa19.12■□□□□ 0.65
SNX17-201ENST00000233575 PWWP2AQ96N64 755 aa19.12■□□□□ 0.65
SNX17-201ENST00000233575 FMO2Q99518 471 aa19.12■□□□□ 0.65
SNX17-201ENST00000233575 CATSPERBQ9H7T0 1116 aa19.12■□□□□ 0.65
SNX17-201ENST00000233575 MYO9BQ13459 2157 aa19.12■□□□□ 0.65
SNX17-201ENST00000233575 PDE4DIPQ5VU43 2346 aa19.12■□□□□ 0.65
SNX17-201ENST00000233575 FGF10O15520 208 aaPredicted RBP19.12■□□□□ 0.65
SNX17-201ENST00000233575 ACSL4O60488 711 aa19.12■□□□□ 0.65
SNX17-201ENST00000233575 PDK1Q15118 436 aa19.12■□□□□ 0.65
SNX17-201ENST00000233575 ARHGAP12Q8IWW6 846 aa19.12■□□□□ 0.65
SNX17-201ENST00000233575 RTL3Q8N8U3 475 aaKnown RBP19.12■□□□□ 0.65
SNX17-201ENST00000233575 RTP4Q96DX8 246 aa19.12■□□□□ 0.65
SNX17-201ENST00000233575 CEP41Q9BYV8 373 aa19.12■□□□□ 0.65
SNX17-201ENST00000233575 CPQQ9Y646 472 aa19.12■□□□□ 0.65
SNX17-201ENST00000233575 SHROOM3Q8TF72 1996 aa19.11■□□□□ 0.65
SNX17-201ENST00000233575 IGLV3-10A0A075B6K4 115 aa19.11■□□□□ 0.65
SNX17-201ENST00000233575 DNALI1O14645 258 aaPredicted RBP19.11■□□□□ 0.65
SNX17-201ENST00000233575 TRDMT1O14717 391 aaKnown RBP19.11■□□□□ 0.65
SNX17-201ENST00000233575 ITIH2P19823 946 aa19.11■□□□□ 0.65
SNX17-201ENST00000233575 TACR2P21452 398 aa19.11■□□□□ 0.65
SNX17-201ENST00000233575 HTR7P34969 479 aa19.11■□□□□ 0.65
SNX17-201ENST00000233575 NRIP1P48552 1158 aa19.11■□□□□ 0.65
SNX17-201ENST00000233575 SMAD3P84022 425 aaKnown RBP19.11■□□□□ 0.65
SNX17-201ENST00000233575 GALNT2Q10471 571 aa19.11■□□□□ 0.65
SNX17-201ENST00000233575 SLC5A9Q2M3M2 681 aa19.11■□□□□ 0.65
SNX17-201ENST00000233575 HEATR6Q6AI08 1181 aaKnown RBP19.11■□□□□ 0.65
SNX17-201ENST00000233575 RHBDF2Q6PJF5 856 aa19.11■□□□□ 0.65
SNX17-201ENST00000233575 ARHGAP36Q6ZRI8 547 aa19.11■□□□□ 0.65
SNX17-201ENST00000233575 BZW1Q7L1Q6 419 aaKnown RBP19.11■□□□□ 0.65
SNX17-201ENST00000233575 TSEN2Q8NCE0 465 aaKnown RBP19.11■□□□□ 0.65
SNX17-201ENST00000233575 TTC16Q8NEE8 873 aa19.11■□□□□ 0.65
SNX17-201ENST00000233575 SHKBP1Q8TBC3 707 aa19.11■□□□□ 0.65
SNX17-201ENST00000233575 HTR3CQ8WXA8 447 aa19.11■□□□□ 0.65
SNX17-201ENST00000233575 RPRD1AQ96P16 312 aaPredicted RBP19.11■□□□□ 0.65
SNX17-201ENST00000233575 TLE6Q9H808 572 aa19.11■□□□□ 0.65
SNX17-201ENST00000233575 PPARGC1AQ9UBK2 798 aaKnown RBP19.11■□□□□ 0.65
SNX17-201ENST00000233575 AGO1Q9UL18 857 aaKnown RBP19.11■□□□□ 0.65
SNX17-201ENST00000233575 CFAP69A5D8W1 941 aa19.1■□□□□ 0.65
SNX17-201ENST00000233575 MOSPD3O75425 235 aa19.1■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms