RNA–Protein interactions for RNA: ENST00000228437.9

PRDM4-201, Transcript of PR/SET domain 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PRDM4, Length 4,210 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM4-201ENST00000228437 PTPRJQ12913 1337 aa14.88□□□□□ -0.03
PRDM4-201ENST00000228437 MAGP20916 626 aa14.88□□□□□ -0.03
PRDM4-201ENST00000228437 MRPS5P82675 430 aaKnown RBP14.88□□□□□ -0.03
PRDM4-201ENST00000228437 SLC18A2Q05940 514 aa14.88□□□□□ -0.03
PRDM4-201ENST00000228437 NUP188Q5SRE5 1749 aa14.88□□□□□ -0.03
PRDM4-201ENST00000228437 PHF21BQ96EK2 531 aa14.88□□□□□ -0.03
PRDM4-201ENST00000228437 NRBF2Q96F24 287 aa14.88□□□□□ -0.03
PRDM4-201ENST00000228437 DGCR6LQ9BY27 220 aa14.88□□□□□ -0.03
PRDM4-201ENST00000228437 BLOC1S6Q9UL45 172 aa14.88□□□□□ -0.03
PRDM4-201ENST00000228437 RGSL1A5PLK6 1076 aa14.87□□□□□ -0.03
PRDM4-201ENST00000228437 PSMD12O00232 456 aaPredicted RBP14.87□□□□□ -0.03
PRDM4-201ENST00000228437 PLIN3O60664 434 aa14.87□□□□□ -0.03
PRDM4-201ENST00000228437 VAPBO95292 243 aa14.87□□□□□ -0.03
PRDM4-201ENST00000228437 HNRNPLP14866 589 aaKnown RBP eCLIP14.87□□□□□ -0.03
PRDM4-201ENST00000228437 ZNF23P17027 643 aa14.87□□□□□ -0.03
PRDM4-201ENST00000228437 ADRA2BP18089 450 aa14.87□□□□□ -0.03
PRDM4-201ENST00000228437 CRHR1P34998 444 aa14.87□□□□□ -0.03
PRDM4-201ENST00000228437 GABRB2P47870 512 aa14.87□□□□□ -0.03
PRDM4-201ENST00000228437 SPP2Q13103 211 aa14.87□□□□□ -0.03
PRDM4-201ENST00000228437 TEDDM1Q5T9Z0 273 aa14.87□□□□□ -0.03
PRDM4-201ENST00000228437 LRRC38Q5VT99 294 aa14.87□□□□□ -0.03
PRDM4-201ENST00000228437 RELL1Q8IUW5 271 aa14.87□□□□□ -0.03
PRDM4-201ENST00000228437 TSR3Q9UJK0 312 aaKnown RBP14.87□□□□□ -0.03
PRDM4-201ENST00000228437 AP4E1Q9UPM8 1137 aa14.87□□□□□ -0.03
PRDM4-201ENST00000228437 VNN1O95497 513 aa14.87□□□□□ -0.03
PRDM4-201ENST00000228437 ALDH1B1P30837 517 aa14.87□□□□□ -0.03
PRDM4-201ENST00000228437 GNA12Q03113 381 aa14.87□□□□□ -0.03
PRDM4-201ENST00000228437 ZBTB17Q13105 803 aa14.87□□□□□ -0.03
PRDM4-201ENST00000228437 OLIG2Q13516 323 aa14.87□□□□□ -0.03
PRDM4-201ENST00000228437 ADGRE1Q14246 886 aa14.87□□□□□ -0.03
PRDM4-201ENST00000228437 ADRM1Q16186 407 aa14.87□□□□□ -0.03
PRDM4-201ENST00000228437 PACS1Q6VY07 963 aa14.87□□□□□ -0.03
PRDM4-201ENST00000228437 ZBTB8BQ8NAP8 495 aaPredicted RBP14.87□□□□□ -0.03
PRDM4-201ENST00000228437 MASTLQ96GX5 879 aa14.87□□□□□ -0.03
PRDM4-201ENST00000228437 PKD2L2Q9NZM6 624 aa14.87□□□□□ -0.03
PRDM4-201ENST00000228437 COQ6Q9Y2Z9 468 aa14.87□□□□□ -0.03
PRDM4-201ENST00000228437 COQ4Q9Y3A0 265 aa14.87□□□□□ -0.03
PRDM4-201ENST00000228437 DGKBQ9Y6T7 804 aa14.87□□□□□ -0.03
PRDM4-201ENST00000228437 PDLIM1O00151 329 aa14.87□□□□□ -0.03
PRDM4-201ENST00000228437 RFPL1O75677 317 aa14.87□□□□□ -0.03
PRDM4-201ENST00000228437 PRKCBP05771 671 aa14.87□□□□□ -0.03
PRDM4-201ENST00000228437 SNRPFP62306 86 aaKnown RBP14.87□□□□□ -0.03
PRDM4-201ENST00000228437 ARCQ7LC44 396 aa14.87□□□□□ -0.03
PRDM4-201ENST00000228437 SAPCD2Q86UD0 394 aa14.87□□□□□ -0.03
PRDM4-201ENST00000228437 CCDC60Q8IWA6 550 aaPredicted RBP14.87□□□□□ -0.03
PRDM4-201ENST00000228437 TMEM130Q8N3G9 435 aa14.87□□□□□ -0.03
PRDM4-201ENST00000228437 GRIN3AQ8TCU5 1115 aa14.87□□□□□ -0.03
PRDM4-201ENST00000228437 ACTRT2Q8TDY3 377 aa14.87□□□□□ -0.03
PRDM4-201ENST00000228437 SPC25Q9HBM1 224 aa14.87□□□□□ -0.03
PRDM4-201ENST00000228437 ARHGEF4Q9NR80 690 aa14.87□□□□□ -0.03
PRDM4-201ENST00000228437 KCNU1A8MYU2 1149 aa14.87□□□□□ -0.03
PRDM4-201ENST00000228437 CHADO15335 359 aa14.87□□□□□ -0.03
PRDM4-201ENST00000228437 METTL18O95568 372 aa14.87□□□□□ -0.03
PRDM4-201ENST00000228437 TRUB2O95900 331 aaKnown RBP14.87□□□□□ -0.03
PRDM4-201ENST00000228437 PENKP01210 267 aaPredicted RBP14.87□□□□□ -0.03
PRDM4-201ENST00000228437 C4BPAP04003 597 aaKnown RBP14.87□□□□□ -0.03
PRDM4-201ENST00000228437 ALOX15P16050 662 aaPredicted RBP14.87□□□□□ -0.03
PRDM4-201ENST00000228437 ADORA2AP29274 412 aa14.87□□□□□ -0.03
PRDM4-201ENST00000228437 POTEHQ6S545 545 aa14.87□□□□□ -0.03
PRDM4-201ENST00000228437 CLEC4FQ8N1N0 589 aa14.87□□□□□ -0.03
PRDM4-201ENST00000228437 DDX51Q8N8A6 666 aaKnown RBP eCLIP14.87□□□□□ -0.03
PRDM4-201ENST00000228437 ZNF512Q96ME7 567 aaPredicted RBP14.87□□□□□ -0.03
PRDM4-201ENST00000228437 PRICKLE1Q96MT3 831 aaPredicted RBP14.87□□□□□ -0.03
PRDM4-201ENST00000228437 MRPL4Q9BYD3 311 aaKnown RBP14.87□□□□□ -0.03
PRDM4-201ENST00000228437 COPG2Q9UBF2 871 aa14.87□□□□□ -0.03
PRDM4-201ENST00000228437 SORCS3Q9UPU3 1222 aa14.87□□□□□ -0.03
PRDM4-201ENST00000228437 ATP11BQ9Y2G3 1177 aa14.87□□□□□ -0.03
PRDM4-201ENST00000228437 SRP72O76094 671 aaKnown RBP14.86□□□□□ -0.03
PRDM4-201ENST00000228437 APBA3O96018 575 aa14.86□□□□□ -0.03
PRDM4-201ENST00000228437 CDH3P22223 829 aa14.86□□□□□ -0.03
PRDM4-201ENST00000228437 SIAH1Q8IUQ4 282 aa14.86□□□□□ -0.03
PRDM4-201ENST00000228437 GMCL1P1Q8NEA9 526 aa14.86□□□□□ -0.03
PRDM4-201ENST00000228437 RNF157Q96PX1 679 aa14.86□□□□□ -0.03
PRDM4-201ENST00000228437 NMRAL1Q9HBL8 299 aa14.86□□□□□ -0.03
PRDM4-201ENST00000228437 ZNF232Q9UNY5 417 aa14.86□□□□□ -0.03
PRDM4-201ENST00000228437 FARP1Q9Y4F1 1045 aaPredicted RBP14.86□□□□□ -0.03
PRDM4-201ENST00000228437 SNX9Q9Y5X1 595 aa14.86□□□□□ -0.03
PRDM4-201ENST00000228437 TEX264Q9Y6I9 313 aa14.86□□□□□ -0.03
PRDM4-201ENST00000228437 SPATA31A1Q5TZJ5 1347 aa14.86□□□□□ -0.03
PRDM4-201ENST00000228437 A0A1W2PPW3 197 aa14.86□□□□□ -0.03
PRDM4-201ENST00000228437 BUD23O43709 281 aaKnown RBP14.86□□□□□ -0.03
PRDM4-201ENST00000228437 BCL10O95999 233 aa14.86□□□□□ -0.03
PRDM4-201ENST00000228437 ERBB2P04626 1255 aa14.86□□□□□ -0.03
PRDM4-201ENST00000228437 PSME3P61289 254 aa14.86□□□□□ -0.03
PRDM4-201ENST00000228437 XKR3Q5GH77 459 aa14.86□□□□□ -0.03
PRDM4-201ENST00000228437 SH3BP5LQ7L8J4 393 aa14.86□□□□□ -0.03
PRDM4-201ENST00000228437 C12orf56Q8IXR9 622 aa14.86□□□□□ -0.03
PRDM4-201ENST00000228437 IFT43Q96FT9 208 aa14.86□□□□□ -0.03
PRDM4-201ENST00000228437 CNPY3Q9BT09 278 aa14.86□□□□□ -0.03
PRDM4-201ENST00000228437 PALMDQ9NP74 551 aa14.86□□□□□ -0.03
PRDM4-201ENST00000228437 SNX15Q9NRS6 342 aa14.86□□□□□ -0.03
PRDM4-201ENST00000228437 HEATR9A2RTY3 570 aa14.86□□□□□ -0.03
PRDM4-201ENST00000228437 TRDMT1O14717 391 aaKnown RBP14.86□□□□□ -0.03
PRDM4-201ENST00000228437 CXCL8P10145 99 aa14.86□□□□□ -0.03
PRDM4-201ENST00000228437 SLC5A2P31639 672 aa14.86□□□□□ -0.03
PRDM4-201ENST00000228437 PTPN11Q06124 597 aaPredicted RBP14.86□□□□□ -0.03
PRDM4-201ENST00000228437 LSM12Q3MHD2 195 aaKnown RBP14.86□□□□□ -0.03
PRDM4-201ENST00000228437 ZFP1Q6P2D0 407 aa14.86□□□□□ -0.03
PRDM4-201ENST00000228437 UGT2A3Q6UWM9 527 aa14.86□□□□□ -0.03
PRDM4-201ENST00000228437 PODNQ7Z5L7 613 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms