RNA–Protein interactions for RNA: ENST00000219281.7

USB1-201, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USB1, Length 2,282 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-201ENST00000219281 ADCY6O43306 1168 aa17.73■□□□□ 0.43
USB1-201ENST00000219281 MFSD11O43934 449 aa17.73■□□□□ 0.43
USB1-201ENST00000219281 SNAI1O95863 264 aaPredicted RBP17.73■□□□□ 0.43
USB1-201ENST00000219281 PDGFRBP09619 1106 aa17.73■□□□□ 0.43
USB1-201ENST00000219281 NCF2P19878 526 aaPredicted RBP17.73■□□□□ 0.43
USB1-201ENST00000219281 TYK2P29597 1187 aa17.73■□□□□ 0.43
USB1-201ENST00000219281 ARL4AP40617 200 aa17.73■□□□□ 0.43
USB1-201ENST00000219281 MLH1P40692 756 aa17.73■□□□□ 0.43
USB1-201ENST00000219281 POLE2P56282 527 aa17.73■□□□□ 0.43
USB1-201ENST00000219281 ABCE1P61221 599 aaKnown RBP17.73■□□□□ 0.43
USB1-201ENST00000219281 LRRC36Q1X8D7 754 aa17.73■□□□□ 0.43
USB1-201ENST00000219281 FAM131BQ86XD5 332 aa17.73■□□□□ 0.43
USB1-201ENST00000219281 SLC26A7Q8TE54 656 aa17.73■□□□□ 0.43
USB1-201ENST00000219281 ZMAT2Q96NC0 199 aaKnown RBP17.73■□□□□ 0.43
USB1-201ENST00000219281 PGLYRP2Q96PD5 576 aa17.73■□□□□ 0.43
USB1-201ENST00000219281 COPG2Q9UBF2 871 aa17.73■□□□□ 0.43
USB1-201ENST00000219281 CCL15-CCL14A0A0B4J2E2 113 aa17.72■□□□□ 0.43
USB1-201ENST00000219281 RBM47A0AV96 593 aaKnown RBP17.72■□□□□ 0.43
USB1-201ENST00000219281 IQCA1LA6NCM1 817 aa17.72■□□□□ 0.43
USB1-201ENST00000219281 HACD1B0YJ81 288 aa17.72■□□□□ 0.43
USB1-201ENST00000219281 RNF103O00237 685 aa17.72■□□□□ 0.43
USB1-201ENST00000219281 CCNT2O60583 730 aaKnown RBP17.72■□□□□ 0.43
USB1-201ENST00000219281 RALBP11234 206 aa17.72■□□□□ 0.43
USB1-201ENST00000219281 GRK2P25098 689 aa17.72■□□□□ 0.43
USB1-201ENST00000219281 PSMB4P28070 264 aa17.72■□□□□ 0.43
USB1-201ENST00000219281 CCNA1P78396 465 aa17.72■□□□□ 0.43
USB1-201ENST00000219281 PEX6Q13608 980 aa17.72■□□□□ 0.43
USB1-201ENST00000219281 ITGA9Q13797 1035 aa17.72■□□□□ 0.43
USB1-201ENST00000219281 CCL15Q16663 113 aa17.72■□□□□ 0.43
USB1-201ENST00000219281 CWF19L1Q69YN2 538 aaKnown RBP17.72■□□□□ 0.43
USB1-201ENST00000219281 RNF111Q6ZNA4 994 aa17.72■□□□□ 0.43
USB1-201ENST00000219281 P2RY11Q96G91 374 aa17.72■□□□□ 0.43
USB1-201ENST00000219281 EBF3Q9H4W6 596 aa17.72■□□□□ 0.43
USB1-201ENST00000219281 TXNDC16Q9P2K2 825 aa17.72■□□□□ 0.43
USB1-201ENST00000219281 TUBGCP4Q9UGJ1 667 aa17.72■□□□□ 0.43
USB1-201ENST00000219281 GTF2IRD1Q9UHL9 959 aa17.72■□□□□ 0.43
USB1-201ENST00000219281 TRIP11Q15643 1979 aa17.72■□□□□ 0.43
USB1-201ENST00000219281 LOC100653049A0A140TA62 436 aa17.72■□□□□ 0.43
USB1-201ENST00000219281 ZNF195O14628 629 aa17.72■□□□□ 0.43
USB1-201ENST00000219281 KRT34O76011 436 aa17.72■□□□□ 0.43
USB1-201ENST00000219281 ASPHQ12797 758 aa17.72■□□□□ 0.43
USB1-201ENST00000219281 CCNIQ14094 377 aa17.72■□□□□ 0.43
USB1-201ENST00000219281 CMC1Q7Z7K0 106 aa17.72■□□□□ 0.43
USB1-201ENST00000219281 DHDDSQ86SQ9 333 aa17.72■□□□□ 0.43
USB1-201ENST00000219281 HACE1Q8IYU2 909 aa17.72■□□□□ 0.43
USB1-201ENST00000219281 GALNT15Q8N3T1 639 aa17.72■□□□□ 0.43
USB1-201ENST00000219281 EFCAB3Q8N7B9 438 aa17.72■□□□□ 0.43
USB1-201ENST00000219281 GTF3C2Q8WUA4 911 aaPredicted RBP17.72■□□□□ 0.43
USB1-201ENST00000219281 PPP2R3CQ969Q6 453 aa17.72■□□□□ 0.43
USB1-201ENST00000219281 CCDC124Q96CT7 223 aaKnown RBP17.72■□□□□ 0.43
USB1-201ENST00000219281 PGBD4Q96DM1 585 aa17.72■□□□□ 0.43
USB1-201ENST00000219281 C16orf70Q9BSU1 422 aa17.72■□□□□ 0.43
USB1-201ENST00000219281 TMPRSS4Q9NRS4 437 aa17.72■□□□□ 0.43
USB1-201ENST00000219281 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.72■□□□□ 0.43
USB1-201ENST00000219281 SNTG2Q9NY99 539 aa17.72■□□□□ 0.43
USB1-201ENST00000219281 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP17.72■□□□□ 0.43
USB1-201ENST00000219281 F7P08709 466 aaPredicted RBP17.71■□□□□ 0.43
USB1-201ENST00000219281 ZNF286BP0CG31 522 aa17.71■□□□□ 0.43
USB1-201ENST00000219281 GRM5P41594 1212 aa17.71■□□□□ 0.43
USB1-201ENST00000219281 BST2Q10589 180 aaKnown RBP17.71■□□□□ 0.43
USB1-201ENST00000219281 INSCQ1MX18 579 aa17.71■□□□□ 0.43
USB1-201ENST00000219281 C11orf91Q3C1V1 193 aa17.71■□□□□ 0.43
USB1-201ENST00000219281 LPCAT4Q643R3 524 aa17.71■□□□□ 0.43
USB1-201ENST00000219281 ARHGAP17Q68EM7 881 aa17.71■□□□□ 0.43
USB1-201ENST00000219281 ADGRG6Q86SQ4 1221 aa17.71■□□□□ 0.43
USB1-201ENST00000219281 CCNYQ8ND76 341 aa17.71■□□□□ 0.43
USB1-201ENST00000219281 HIPK4Q8NE63 616 aa17.71■□□□□ 0.43
USB1-201ENST00000219281 PPTC7Q8NI37 304 aa17.71■□□□□ 0.43
USB1-201ENST00000219281 C18orf25Q96B23 403 aaPredicted RBP17.71■□□□□ 0.43
USB1-201ENST00000219281 ATXN7L3BQ96GX2 97 aa17.71■□□□□ 0.43
USB1-201ENST00000219281 FAM96AQ9H5X1 160 aa17.71■□□□□ 0.43
USB1-201ENST00000219281 VTA1Q9NP79 307 aa17.71■□□□□ 0.43
USB1-201ENST00000219281 CDH22Q9UJ99 828 aa17.71■□□□□ 0.43
USB1-201ENST00000219281 FZD10Q9ULW2 581 aa17.71■□□□□ 0.43
USB1-201ENST00000219281 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP17.7■□□□□ 0.42
USB1-201ENST00000219281 RNASEH1O60930 286 aaKnown RBP17.7■□□□□ 0.42
USB1-201ENST00000219281 ZMPSTE24O75844 475 aa17.7■□□□□ 0.42
USB1-201ENST00000219281 STK10O94804 968 aaKnown RBP17.7■□□□□ 0.42
USB1-201ENST00000219281 CPA3P15088 417 aa17.7■□□□□ 0.42
USB1-201ENST00000219281 ROR2Q01974 943 aaKnown RBP17.7■□□□□ 0.42
USB1-201ENST00000219281 NAB1Q13506 487 aa17.7■□□□□ 0.42
USB1-201ENST00000219281 OLIG2Q13516 323 aa17.7■□□□□ 0.42
USB1-201ENST00000219281 GLRA4Q5JXX5 417 aa17.7■□□□□ 0.42
USB1-201ENST00000219281 PGM2L1Q6PCE3 622 aa17.7■□□□□ 0.42
USB1-201ENST00000219281 PAXIP1Q6ZW49 1069 aaPredicted RBP17.7■□□□□ 0.42
USB1-201ENST00000219281 PDSS2Q86YH6 399 aa17.7■□□□□ 0.42
USB1-201ENST00000219281 TNS4Q8IZW8 715 aa17.7■□□□□ 0.42
USB1-201ENST00000219281 PHTF2Q8N3S3 785 aa17.7■□□□□ 0.42
USB1-201ENST00000219281 ANKRD52Q8NB46 1076 aa17.7■□□□□ 0.42
USB1-201ENST00000219281 OR6Y1Q8NGX8 325 aa17.7■□□□□ 0.42
USB1-201ENST00000219281 ACTRT2Q8TDY3 377 aa17.7■□□□□ 0.42
USB1-201ENST00000219281 NDRG1Q92597 394 aaKnown RBP17.7■□□□□ 0.42
USB1-201ENST00000219281 OXCT2Q9BYC2 517 aaPredicted RBP17.7■□□□□ 0.42
USB1-201ENST00000219281 EIF2B3Q9NR50 452 aaKnown RBP17.7■□□□□ 0.42
USB1-201ENST00000219281 SLC45A1Q9Y2W3 748 aa17.7■□□□□ 0.42
USB1-201ENST00000219281 RPS6KL1Q9Y6S9 549 aa17.7■□□□□ 0.42
USB1-201ENST00000219281 SYNJ2BP-COX16A0A087WUM0 186 aa17.7■□□□□ 0.42
USB1-201ENST00000219281 OPHN1O60890 802 aa17.7■□□□□ 0.42
USB1-201ENST00000219281 ALOX15P16050 662 aaPredicted RBP17.7■□□□□ 0.42
USB1-201ENST00000219281 ITGAXP20702 1163 aa17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms