RNA–Protein interactions for RNA: ENST00000218348.7

USP11-201, Transcript of ubiquitin specific peptidase 11, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene USP11, Length 3,338 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-201ENST00000218348 ARHGEF4Q9NR80 690 aa10.26□□□□□ -0.77
USP11-201ENST00000218348 GDAP2Q9NXN4 497 aa10.26□□□□□ -0.77
USP11-201ENST00000218348 PAK5Q9P286 719 aa10.26□□□□□ -0.77
USP11-201ENST00000218348 TMEM98Q9Y2Y6 226 aa10.26□□□□□ -0.77
USP11-201ENST00000218348 WDR27A2RRH5 827 aa10.25□□□□□ -0.77
USP11-201ENST00000218348 CCT8L1PA6NM43 557 aa10.25□□□□□ -0.77
USP11-201ENST00000218348 TRIM49D1C9J1S8 452 aa10.25□□□□□ -0.77
USP11-201ENST00000218348 ARVCFO00192 962 aa10.25□□□□□ -0.77
USP11-201ENST00000218348 XPO1O14980 1071 aaKnown RBP10.25□□□□□ -0.77
USP11-201ENST00000218348 MSI1O43347 362 aaKnown RBP10.25□□□□□ -0.77
USP11-201ENST00000218348 SNX3O60493 162 aa10.25□□□□□ -0.77
USP11-201ENST00000218348 SOAT2O75908 522 aa10.25□□□□□ -0.77
USP11-201ENST00000218348 ENDOD1O94919 500 aa10.25□□□□□ -0.77
USP11-201ENST00000218348 PSMB4P28070 264 aa10.25□□□□□ -0.77
USP11-201ENST00000218348 SCTRP47872 440 aa10.25□□□□□ -0.77
USP11-201ENST00000218348 PGGT1BP53609 377 aa10.25□□□□□ -0.77
USP11-201ENST00000218348 KCNJ11Q14654 390 aa10.25□□□□□ -0.77
USP11-201ENST00000218348 SNCBQ16143 134 aa10.25□□□□□ -0.77
USP11-201ENST00000218348 EFHC1Q5JVL4 640 aa10.25□□□□□ -0.77
USP11-201ENST00000218348 SDCCAG8Q86SQ7 713 aaPredicted RBP10.25□□□□□ -0.77
USP11-201ENST00000218348 ZMIZ2Q8NF64 920 aa10.25□□□□□ -0.77
USP11-201ENST00000218348 MECRQ9BV79 373 aa10.25□□□□□ -0.77
USP11-201ENST00000218348 SFMBT1Q9UHJ3 866 aa10.25□□□□□ -0.77
USP11-201ENST00000218348 EFR3BQ9Y2G0 817 aa10.25□□□□□ -0.77
USP11-201ENST00000218348 STK38LQ9Y2H1 464 aa10.25□□□□□ -0.77
USP11-201ENST00000218348 RNF103O00237 685 aa10.25□□□□□ -0.77
USP11-201ENST00000218348 EEF2KO00418 725 aaKnown RBP10.25□□□□□ -0.77
USP11-201ENST00000218348 ATP2A2P16615 1042 aaKnown RBP10.25□□□□□ -0.77
USP11-201ENST00000218348 TPH1P17752 444 aa10.25□□□□□ -0.77
USP11-201ENST00000218348 HOXD11P31277 338 aaPredicted RBP10.25□□□□□ -0.77
USP11-201ENST00000218348 SNX16P57768 344 aa10.25□□□□□ -0.77
USP11-201ENST00000218348 LRRC26Q2I0M4 334 aa10.25□□□□□ -0.77
USP11-201ENST00000218348 BZW1Q7L1Q6 419 aaKnown RBP10.25□□□□□ -0.77
USP11-201ENST00000218348 LRRTM3Q86VH5 581 aa10.25□□□□□ -0.77
USP11-201ENST00000218348 COLGALT1Q8NBJ5 622 aa10.25□□□□□ -0.77
USP11-201ENST00000218348 LRRC8CQ8TDW0 803 aa10.25□□□□□ -0.77
USP11-201ENST00000218348 NSMCE1Q8WV22 266 aa10.25□□□□□ -0.77
USP11-201ENST00000218348 CENPTQ96BT3 561 aa10.25□□□□□ -0.77
USP11-201ENST00000218348 PGBD4Q96DM1 585 aa10.25□□□□□ -0.77
USP11-201ENST00000218348 TSC22D3Q99576 134 aa10.25□□□□□ -0.77
USP11-201ENST00000218348 HNRNPABQ99729 332 aaKnown RBP10.25□□□□□ -0.77
USP11-201ENST00000218348 FAM167BQ9BTA0 163 aa10.25□□□□□ -0.77
USP11-201ENST00000218348 ZNF395Q9H8N7 513 aaPredicted RBP10.25□□□□□ -0.77
USP11-201ENST00000218348 NPHS2Q9NP85 383 aa10.25□□□□□ -0.77
USP11-201ENST00000218348 SMYD2Q9NRG4 433 aa10.25□□□□□ -0.77
USP11-201ENST00000218348 HCSTQ9UBK5 93 aa10.25□□□□□ -0.77
USP11-201ENST00000218348 CHD7Q9P2D1 2997 aa10.25□□□□□ -0.77
USP11-201ENST00000218348 ZNF638Q14966 1978 aaKnown RBP10.25□□□□□ -0.77
USP11-201ENST00000218348 LSM1O15116 133 aaKnown RBP10.25□□□□□ -0.77
USP11-201ENST00000218348 FYNP06241 537 aa10.25□□□□□ -0.77
USP11-201ENST00000218348 EN2P19622 333 aaPredicted RBP10.25□□□□□ -0.77
USP11-201ENST00000218348 TCTN1Q2MV58 587 aa10.25□□□□□ -0.77
USP11-201ENST00000218348 SLC25A52Q3SY17 297 aa10.25□□□□□ -0.77
USP11-201ENST00000218348 SLC45A4Q5BKX6 768 aa10.25□□□□□ -0.77
USP11-201ENST00000218348 OTUD1Q5VV17 481 aaPredicted RBP10.25□□□□□ -0.77
USP11-201ENST00000218348 CGB2Q6NT52 195 aa10.25□□□□□ -0.77
USP11-201ENST00000218348 TRPM8Q7Z2W7 1104 aa10.25□□□□□ -0.77
USP11-201ENST00000218348 TFB1MQ8WVM0 346 aaKnown RBP10.25□□□□□ -0.77
USP11-201ENST00000218348 HTR3CQ8WXA8 447 aa10.25□□□□□ -0.77
USP11-201ENST00000218348 P2RY11Q96G91 374 aa10.25□□□□□ -0.77
USP11-201ENST00000218348 CYTH2Q99418 400 aa10.25□□□□□ -0.77
USP11-201ENST00000218348 SEZ6LQ9BYH1 1024 aa10.25□□□□□ -0.77
USP11-201ENST00000218348 UBE2OQ9C0C9 1292 aaKnown RBP10.25□□□□□ -0.77
USP11-201ENST00000218348 SENP6Q9GZR1 1112 aaPredicted RBP10.25□□□□□ -0.77
USP11-201ENST00000218348 RHBDL2Q9NX52 303 aa10.25□□□□□ -0.77
USP11-201ENST00000218348 ABI2Q9NYB9 513 aaPredicted RBP10.25□□□□□ -0.77
USP11-201ENST00000218348 KLHL8Q9P2G9 620 aaPredicted RBP10.25□□□□□ -0.77
USP11-201ENST00000218348 LGALS13Q9UHV8 139 aa10.25□□□□□ -0.77
USP11-201ENST00000218348 USP15Q9Y4E8 981 aaPredicted RBP10.25□□□□□ -0.77
USP11-201ENST00000218348 SPTBN5Q9NRC6 3674 aaKnown RBP10.24□□□□□ -0.77
USP11-201ENST00000218348 B4GALT3O60512 393 aa10.24□□□□□ -0.77
USP11-201ENST00000218348 SAT1P21673 171 aa10.24□□□□□ -0.77
USP11-201ENST00000218348 ITGB8P26012 769 aa10.24□□□□□ -0.77
USP11-201ENST00000218348 MGAT1P26572 445 aa10.24□□□□□ -0.77
USP11-201ENST00000218348 EPHB2P29323 1055 aa10.24□□□□□ -0.77
USP11-201ENST00000218348 DPYSL2Q16555 572 aa10.24□□□□□ -0.77
USP11-201ENST00000218348 PUS10Q3MIT2 529 aaKnown RBP10.24□□□□□ -0.77
USP11-201ENST00000218348 EFHC2Q5JST6 749 aa10.24□□□□□ -0.77
USP11-201ENST00000218348 ANKRD20A2Q5SQ80 823 aa10.24□□□□□ -0.77
USP11-201ENST00000218348 ANKRD20A1Q5TYW2 823 aa10.24□□□□□ -0.77
USP11-201ENST00000218348 ANKRD20A3Q5VUR7 823 aa10.24□□□□□ -0.77
USP11-201ENST00000218348 SLC9A4Q6AI14 798 aa10.24□□□□□ -0.77
USP11-201ENST00000218348 ZNF449Q6P9G9 518 aa10.24□□□□□ -0.77
USP11-201ENST00000218348 ZNF280BQ86YH2 543 aa10.24□□□□□ -0.77
USP11-201ENST00000218348 CRIPAKQ8N1N5 446 aa10.24□□□□□ -0.77
USP11-201ENST00000218348 PTPRN2Q92932 1015 aa10.24□□□□□ -0.77
USP11-201ENST00000218348 TOX2Q96NM4 488 aa10.24□□□□□ -0.77
USP11-201ENST00000218348 ZNF670Q9BS34 389 aa10.24□□□□□ -0.77
USP11-201ENST00000218348 ACSS3Q9H6R3 686 aa10.24□□□□□ -0.77
USP11-201ENST00000218348 PCMTD2Q9NV79 361 aa10.24□□□□□ -0.77
USP11-201ENST00000218348 EURLQ9NYK6 297 aa10.24□□□□□ -0.77
USP11-201ENST00000218348 MARCOQ9UEW3 520 aaPredicted RBP10.24□□□□□ -0.77
USP11-201ENST00000218348 TBX21Q9UL17 535 aa10.24□□□□□ -0.77
USP11-201ENST00000218348 PHTF1Q9UMS5 762 aa10.24□□□□□ -0.77
USP11-201ENST00000218348 PRRC2BQ5JSZ5 2229 aaKnown RBP10.24□□□□□ -0.77
USP11-201ENST00000218348 NT5C1B-RDH14C9J2C7 533 aa10.24□□□□□ -0.77
USP11-201ENST00000218348 DPYSL4O14531 572 aa10.24□□□□□ -0.77
USP11-201ENST00000218348 MDM4O15151 490 aa10.24□□□□□ -0.77
USP11-201ENST00000218348 ATP9BO43861 1147 aa10.24□□□□□ -0.77
USP11-201ENST00000218348 LPXNO60711 386 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms